Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3017c_(esxQ)_3376500_3376862
DateThu Aug 8 16:20:18 BST 2019
Unique Job ID2c0a6d58a358f717
SequenceVSQSMYSYPA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:36.422 Y:32.157 Z:51.243
Model (left) based on template c3q4hB_
Top template information
PDB header:metal transport
Chain: B: PDB Molecule:low molecular weight protein antigen 7;
PDBTitle: crystal structure of the mycobacterium smegmatis esxgh complex2 (msmeg_0620-msmeg_0621)
Confidence and coverage
Confidence:100.0% Coverage: 53%
64 residues ( 53% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3q4hB_



100.0 52
PDB header:metal transport
Chain: B: PDB Molecule:low molecular weight protein antigen 7;
PDBTitle: crystal structure of the mycobacterium smegmatis esxgh complex2 (msmeg_0620-msmeg_0621)
2c3h6pD_



100.0 65
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:esat-6-like protein esxr;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
3c2kg7B_



98.6 56
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
4d1wa8b1



98.4 18
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
5c4lwsB_



97.5 12
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
6c4lwsA_



97.1 15
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
7d1wa8a1



95.6 13
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
8c3gvmA_



95.4 9
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c4iogD_



94.5 14
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
10c3zbhC_



90.4 9
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
11c2vs0B_



90.0 11
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
12c2do5A_



29.6 45
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:splicing factor 3b subunit 2;
PDBTitle: solution structure of the sap domain of human splicing2 factor 3b subunit 2
13d1ju8a_



26.3 35
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Albumin 1
14c3wofB_



25.9 60
PDB header:transferase/transcription
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of p23-45 gp39 (6-132) bound to thermus thermophilus2 rna polymerase beta-flap domain
15c3wodG_



23.2 60
PDB header:transferase/transcription
Chain: G: PDB Molecule:putative uncharacterized protein;
PDBTitle: rna polymerase-gp39 complex
16c5tc1M_



21.4 46
PDB header:viral protein/rna
Chain: M: PDB Molecule:maturation protein;
PDBTitle: in situ structures of the genome and genome-delivery apparatus in2 ssrna bacteriophage ms2
17c3qbzA_



21.2 33
PDB header:cell cycle
Chain: A: PDB Molecule:ddk kinase regulatory subunit dbf4;
PDBTitle: crystal structure of the rad53-recognition domain of saccharomyces2 cerevisiae dbf4
18c5t2sA_



20.0 25
PDB header:cell cycle
Chain: A: PDB Molecule:ddk kinase regulatory subunit dbf4,serine/threonine-protein
PDBTitle: structure of the fha1 domain of rad53 bound simultaneously to the brct2 domain of dbf4 and a phosphopeptide.
19d1p8ba_



19.8 35
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Albumin 1
20d3cr3a1



19.6 23
Fold:DhaL-like
Superfamily:DhaL-like
Family:DhaL-like
21c2ru8A_



not modelled 16.3 35
PDB header:replication
Chain: A: PDB Molecule:primosomal protein 1;
PDBTitle: dnat c-terminal domain
22c6d8tA_



not modelled 14.6 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant e25k/k27e
23d1scya_



not modelled 14.5 33
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Short-chain scorpion toxins
24c1scyA_



not modelled 14.5 33
PDB header:neurotoxin
Chain: A: PDB Molecule:scyllatoxin;
PDBTitle: determination of the three-dimensional structure of scyllatoxin by 1h2 nuclear magnetic resonance
25c5is0E_



not modelled 14.2 21
PDB header:transport protein
Chain: E: PDB Molecule:transient receptor potential cation channel subfamily v
PDBTitle: structure of trpv1 in complex with capsazepine, determined in lipid2 nanodisc
26c2izpB_



not modelled 13.6 7
PDB header:toxin
Chain: B: PDB Molecule:putative membrane antigen;
PDBTitle: bipd - an invasion prtein associated with the type-iii2 secretion system of burkholderia pseudomallei.
27c2ky3A_



not modelled 13.1 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: solution structure of gs-alfa-ktx5.4 synthetic scorpion like
28c6d93A_



not modelled 13.0 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant y31a
29d1un8a1



not modelled 12.8 17
Fold:DhaL-like
Superfamily:DhaL-like
Family:DhaL-like
30c4c0lA_



not modelled 12.5 17
PDB header:hydrolase
Chain: A: PDB Molecule:mitochondrial rho gtpase;
PDBTitle: crystal structure of drosophila miro ef hand and cgtpase domains2 bound to one magnesium ion and mg:gdp (mggdp-miros)
31c6d8rA_



not modelled 12.5 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant e25k
32c6d8yA_



not modelled 12.3 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant y31h
33d2izpa1



not modelled 11.3 7
Fold:IpaD-like
Superfamily:IpaD-like
Family:IpaD-like
34c4bjjB_



not modelled 11.3 54
PDB header:transcription
Chain: B: PDB Molecule:transcription factor tau subunit sfc7;
PDBTitle: sfc1-sfc7 dimerization module
35c6d8qA_



not modelled 11.0 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant dp30/y31+n
36c4o8uE_



not modelled 10.9 53
PDB header:unknown function
Chain: E: PDB Molecule:uncharacterized protein pf2046;
PDBTitle: structure of pf2046
37c6d3tA_



not modelled 10.8 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant dp30
38d1pnha_



not modelled 10.8 33
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Short-chain scorpion toxins
39c1pnhA_



not modelled 10.8 33
PDB header:toxin
Chain: A: PDB Molecule:scorpion toxin;
PDBTitle: solution structure of po5-nh2, a scorpion toxin analog with high2 affinity for the apamin-sensitive potassium channel
40c3zqbB_



not modelled 10.7 25
PDB header:cell invasion
Chain: B: PDB Molecule:protein prgi, cell invasion protein sipd;
PDBTitle: prgi-sipd from salmonella typhimurium
41c6d9oA_



not modelled 10.6 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant e25a
42c6d8sA_



not modelled 10.2 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant k27e
43c2p7nA_



not modelled 9.6 31
PDB header:cell invasion
Chain: A: PDB Molecule:pathogenicity island 1 effector protein;
PDBTitle: crystal structure of the pathogenicity island 1 effector protein from2 chromobacterium violaceum. northeast structural genomics consortium3 (nesgc) target cvr69.
44c6d9pA_



not modelled 9.6 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant k27a
45c2iunD_



not modelled 9.0 67
PDB header:viral protein
Chain: D: PDB Molecule:avian adenovirus celo long fibre;
PDBTitle: structure of the c-terminal head domain of the avian adenovirus celo2 long fibre (p21 crystal form)
46c6d8uA_



not modelled 8.7 35
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 5.4;
PDBTitle: nmr solution structure of tamapin, mutant k20e
47d1e6va1



not modelled 8.7 38
Fold:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Superfamily:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Family:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
48c4hdeA_



not modelled 8.0 16
PDB header:lipid binding protein
Chain: A: PDB Molecule:sco1/senc family lipoprotein;
PDBTitle: the crystal structure of a sco1/senc family lipoprotein from bacillus2 anthracis str. ames
49c3nzzA_



not modelled 7.9 25
PDB header:cell invasion
Chain: A: PDB Molecule:cell invasion protein sipd;
PDBTitle: crystal structure of the salmonella type iii secretion system tip2 protein sipd
50c4b2gB_



not modelled 7.0 34
PDB header:signaling protein
Chain: B: PDB Molecule:gh3-1 auxin conjugating enzyme;
PDBTitle: crystal structure of an indole-3-acetic acid amido synthase from vitis2 vinifera involved in auxin homeostasis
51d1aisa1



not modelled 6.8 30
Fold:TBP-like
Superfamily:TATA-box binding protein-like
Family:TATA-box binding protein (TBP), C-terminal domain
52d1f15a_



not modelled 6.7 42
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Bromoviridae-like VP
53d1r5ta_



not modelled 6.7 23
Fold:Cytidine deaminase-like
Superfamily:Cytidine deaminase-like
Family:Cytidine deaminase
54c3dktD_



not modelled 6.6 18
PDB header:structural protein/virus like particle
Chain: D: PDB Molecule:maritimacin;
PDBTitle: crystal structure of thermotoga maritima encapsulin
55c6c3rB_



not modelled 6.6 46
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
56c3fybA_



not modelled 6.4 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein of unknown function (duf1244);
PDBTitle: crystal structure of a protein of unknown function (duf1244) from2 alcanivorax borkumensis
57c6avhA_



not modelled 6.1 24
PDB header:ligase, plant protein
Chain: A: PDB Molecule:gh3.15 acyl acid amido synthetase;
PDBTitle: gh3.15 acyl acid amido synthetase
58c5n1qD_



not modelled 6.0 45
PDB header:transferase
Chain: D: PDB Molecule:methyl-coenzyme m reductase iii from methanothermococcus
PDBTitle: methyl-coenzyme m reductase iii from methanothermococcus2 thermolithotrophicus at 1.9 a resolution
59c1mtpB_



not modelled 6.0 50
PDB header:structural genomics
Chain: B: PDB Molecule:serine proteinase inhibitor (serpin), chain b;
PDBTitle: the x-ray crystal structure of a serpin from a thermophilic prokaryote
60d1laja_



not modelled 6.0 24
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Bromoviridae-like VP
61c1lajA_



not modelled 6.0 24
PDB header:virus/rna
Chain: A: PDB Molecule:capsid protein;
PDBTitle: the structure of tomato aspermy virus by x-ray2 crystallography
62d2o35a1



not modelled 5.9 22
Fold:SMc04008-like
Superfamily:SMc04008-like
Family:SMc04008-like
63c2o35A_



not modelled 5.9 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein duf1244;
PDBTitle: protein of unknown function (duf1244) from sinorhizobium meliloti
64d2akab1



not modelled 5.8 35
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
65c3jcuO_



not modelled 5.8 44
PDB header:membrane protein
Chain: O: PDB Molecule:oxygen-evolving enhancer protein 1, chloroplastic;
PDBTitle: cryo-em structure of spinach psii-lhcii supercomplex at 3.2 angstrom2 resolution
66c2jorA_



not modelled 5.7 38
PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha chain;
PDBTitle: nmr solution structure, stability, and interaction of the2 recombinant bovine fibrinogen alphac-domain fragment
67d1hbna1



not modelled 5.7 40
Fold:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Superfamily:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Family:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
68d1vi7a1



not modelled 5.5 35
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:YigZ N-terminal domain-like
69d1e6ya1



not modelled 5.5 45
Fold:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Superfamily:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
Family:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
70d2axto1



not modelled 5.4 40
Fold:Transmembrane beta-barrels
Superfamily:OMPA-like
Family:PsbO-like
71c3g8aF_



not modelled 5.4 14
PDB header:transferase
Chain: F: PDB Molecule:ribosomal rna small subunit methyltransferase g;
PDBTitle: t. thermophilus 16s rrna g527 methyltransferase in complex with adohcy2 in space group p61
72c5lnkm_



not modelled 5.3 38
PDB header:oxidoreductase
Chain: M: PDB Molecule:mitochondrial complex i, nd4 subunit;
PDBTitle: entire ovine respiratory complex i

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