Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3026c_(-)_3385174_3386088
DateThu Aug 8 16:20:19 BST 2019
Unique Job IDfc941ea7ab800e01
SequenceMSAPAVTEHS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.980 Y:50.753 Z:50.378
Model (left) based on template c5kymA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:1-acyl-sn-glycerol-3-phosphate acyltransferase;
PDBTitle: crystal structure of the 1-acyl-sn-glycerophosphate (lpa)2 acyltransferase, plsc, from thermotoga maritima
Confidence and coverage
Confidence:100.0% Coverage: 74%
225 residues ( 74% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5kymA_



100.0 18
PDB header:transferase
Chain: A: PDB Molecule:1-acyl-sn-glycerol-3-phosphate acyltransferase;
PDBTitle: crystal structure of the 1-acyl-sn-glycerophosphate (lpa)2 acyltransferase, plsc, from thermotoga maritima
2c5f34A_



99.3 12
PDB header:transferase
Chain: A: PDB Molecule:phosphatidylinositol mannoside acyltransferase;
PDBTitle: crystal structure of membrane associated pata from mycobacterium2 smegmatis in complex with s-hexadecyl coenzyme a - p21 space group
3c5knkB_



99.0 13
PDB header:transferase
Chain: B: PDB Molecule:lipid a biosynthesis lauroyl acyltransferase;
PDBTitle: lipid a secondary acyltransferase lpxm from acinetobacter baumannii2 with catalytic residue substitution (e127a)
4d1iuqa_



97.9 21
Fold:Glycerol-3-phosphate (1)-acyltransferase
Superfamily:Glycerol-3-phosphate (1)-acyltransferase
Family:Glycerol-3-phosphate (1)-acyltransferase
5c5vrhA_



78.5 14
PDB header:transferase
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: apolipoprotein n-acyltransferase c387s active site mutant
6c4hg3C_



49.0 24
PDB header:hydrolase
Chain: C: PDB Molecule:probable hydrolase nit2;
PDBTitle: structural insights into yeast nit2: wild-type yeast nit2 in complex2 with alpha-ketoglutarate
7c4cyyA_



43.2 17
PDB header:hydrolase
Chain: A: PDB Molecule:pantetheinase;
PDBTitle: the structure of vanin-1: defining the link between metabolic disease,2 oxidative stress and inflammation
8c2e11B_



38.5 10
PDB header:hydrolase
Chain: B: PDB Molecule:hydrolase;
PDBTitle: the crystal structure of xc1258 from xanthomonas campestris: a cn-2 hydrolase superfamily protein with an arsenic adduct in the active3 site
9c3wuyA_



36.3 28
PDB header:hydrolase
Chain: A: PDB Molecule:nitrilase;
PDBTitle: crystal structure of nit6803
10c3hkxA_



33.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:amidase;
PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp.
11c4mxnB_



30.5 13
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative glycosyl hydrolase (parmer_00599) from2 parabacteroides merdae atcc 43184 at 1.95 a resolution
12c1emsB_



28.4 11
PDB header:antitumor protein
Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein;
PDBTitle: crystal structure of the c. elegans nitfhit protein
13c2vhhA_



27.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
14c1yj5B_



26.9 22
PDB header:transferase
Chain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain;
PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
15c6i00C_



26.3 20
PDB header:hydrolase
Chain: C: PDB Molecule:bifunctional nitrilase/nitrile hydratase nit4;
PDBTitle: cryo-em informed directed evolution of nitrilase 4 leads to a change2 in quaternary structure.
16d1k7ja_



23.4 16
Fold:YrdC/RibB
Superfamily:YrdC/RibB
Family:YrdC-like
17c3zvmA_



22.1 23
PDB header:hydrolase/transferase/dna
Chain: A: PDB Molecule:bifunctional polynucleotide phosphatase/kinase;
PDBTitle: the structural basis for substrate recognition by mammalian2 polynucleotide kinase 3' phosphatase
18c6mg6D_



21.8 9
PDB header:hydrolase
Chain: D: PDB Molecule:carbon-nitrogen hydrolase;
PDBTitle: crystal structure of carbon-nitrogen hydrolase from helicobacter2 pylori g27
19c6ftqA_



21.0 11
PDB header:hydrolase
Chain: A: PDB Molecule:beta-ureidopropionase;
PDBTitle: crystal structure of human beta-ureidopropionase (beta-alanine2 synthase) - mutant t299c
20d1uf5a_



20.8 14
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Carbamilase
21d1emsa2



not modelled 19.1 14
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Nitrilase
22c5uyvA_



not modelled 18.6 19
PDB header:metal transport
Chain: A: PDB Molecule:periplasmic chelated iron-binding protein yfea;
PDBTitle: yfea ancillary sites that do not co-load with site 2
23c2vhiG_



not modelled 18.0 17
PDB header:hydrolase
Chain: G: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
24d1hrua_



not modelled 17.7 17
Fold:YrdC/RibB
Superfamily:YrdC/RibB
Family:YrdC-like
25c2o1eB_



not modelled 17.6 13
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ycdh;
PDBTitle: crystal structure of the metal-dependent lipoprotein ycdh2 from bacillus subtilis, northeast structural genomics3 target sr583
26d1vj0a1



not modelled 16.7 27
Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
27c3ilvA_



not modelled 16.3 20
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii
28c5khaA_



not modelled 15.3 8
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad+ synthetase;
PDBTitle: structure of glutamine-dependent nad+ synthetase from acinetobacter2 baumannii in complex with adenosine diphosphate (adp)
29c2w1vA_



not modelled 15.3 17
PDB header:hydrolase
Chain: A: PDB Molecule:nitrilase homolog 2;
PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution
30d1j31a_



not modelled 14.9 20
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Carbamilase
31d1jcua_



not modelled 14.6 26
Fold:YrdC/RibB
Superfamily:YrdC/RibB
Family:YrdC-like
32c5ixdB_



not modelled 14.1 19
PDB header:cytokine
Chain: B: PDB Molecule:interferon lambda receptor 1;
PDBTitle: structure of human jak1 ferm/sh2 in complex with ifn lambda receptor
33c4makA_



not modelled 13.1 16
PDB header:hydrolase
Chain: A: PDB Molecule:crispr-associated endoribonuclease cas2;
PDBTitle: crystal structure of a putative ssrna endonuclease cas2, crispr2 adaptation protein from e.coli
34c3hjtB_



not modelled 12.0 16
PDB header:cell adhesion, transport protein
Chain: B: PDB Molecule:lmb;
PDBTitle: structure of laminin binding protein (lmb) of streptococcus agalactiae2 a bifunctional protein with adhesin and metal transporting activity
35d1bg5a1



not modelled 12.0 11
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
36c2ov3A_



not modelled 11.5 15
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic binding protein component of an abc type zinc
PDBTitle: crystal structure of 138-173 znua deletion mutant plus zinc bound
37d1f89a_



not modelled 11.4 14
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Nitrilase
38d1pq4a_



not modelled 11.1 13
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:TroA-like
39d1bhea_



not modelled 10.9 14
Fold:Single-stranded right-handed beta-helix
Superfamily:Pectin lyase-like
Family:Galacturonase
40c3zppA_



not modelled 10.4 30
PDB header:cell adhesion
Chain: A: PDB Molecule:cell wall surface anchor family protein;
PDBTitle: structure of the streptococcus pneumoniae surface protein2 and adhesin pfba
41c5h8lM_



not modelled 10.2 6
PDB header:hydrolase
Chain: M: PDB Molecule:n-carbamoylputrescine amidohydrolase;
PDBTitle: crystal structure of medicago truncatula n-carbamoylputrescine2 amidohydrolase (mtcpa) c158s mutant in complex with putrescine
42c4cl2A_



not modelled 10.1 17
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic solute binding protein;
PDBTitle: structure of periplasmic metal binding protein from candidatus2 liberibacter asiaticus
43c4f4hA_



not modelled 9.9 17
PDB header:ligase
Chain: A: PDB Molecule:glutamine dependent nad+ synthetase;
PDBTitle: crystal structure of a glutamine dependent nad+ synthetase from2 burkholderia thailandensis
44c3n05B_



not modelled 9.7 21
PDB header:ligase
Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis
45c2ogwB_



not modelled 9.3 16
PDB header:transport protein
Chain: B: PDB Molecule:high-affinity zinc uptake system protein znua
PDBTitle: structure of abc type zinc transporter from e. coli
46c3dlaD_



not modelled 8.9 24
PDB header:ligase
Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don
47c6f87C_



not modelled 8.8 35
PDB header:transferase
Chain: C: PDB Molecule:threonylcarbamoyl-amp synthase;
PDBTitle: crystal structure of p. abyssi sua5 complexed with l-threonine and ppi
48c4c2lA_



not modelled 8.0 22
PDB header:hydrolase
Chain: A: PDB Molecule:endo-xylogalacturonan hydrolase a;
PDBTitle: crystal structure of endo-xylogalacturonan hydrolase from aspergillus2 tubingensis
49d1gnea1



not modelled 8.0 11
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
50d1b8xa1



not modelled 8.0 11
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
51d1y0na_



not modelled 7.8 25
Fold:YehU-like
Superfamily:YehU-like
Family:YehU-like
52c2xc8B_



not modelled 7.5 50
PDB header:viral protein
Chain: B: PDB Molecule:gene 22 product;
PDBTitle: crystal structure of the gene 22 product of the bacillus subtilis spp12 phage
53c4as2D_



not modelled 7.3 13
PDB header:hydrolase
Chain: D: PDB Molecule:phosphorylcholine phosphatase;
PDBTitle: pseudomonas aeruginosa phosphorylcholine phosphatase. monoclinic form
54c3jurA_



not modelled 7.3 22
PDB header:hydrolase
Chain: A: PDB Molecule:exo-poly-alpha-d-galacturonosidase;
PDBTitle: the crystal structure of a hyperthermoactive exopolygalacturonase from2 thermotoga maritima
55c3eqnB_



not modelled 7.1 55
PDB header:hydrolase
Chain: B: PDB Molecule:glucan 1,3-beta-glucosidase;
PDBTitle: crystal structure of beta-1,3-glucanase from phanerochaete2 chrysosporium (lam55a)
56c2eqaA_



not modelled 7.0 35
PDB header:rna binding protein
Chain: A: PDB Molecule:hypothetical protein st1526;
PDBTitle: crystal structure of the hypothetical sua5 protein from2 sulfolobus tokodaii
57d1g26a_



not modelled 7.0 50
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Granulin repeat
Family:Granulin repeat
58c4z42A_



not modelled 6.6 24
PDB header:hydrolase
Chain: A: PDB Molecule:urease subunit gamma;
PDBTitle: crystal structure of urease from yersinia enterocolitica
59d1k3ya1



not modelled 6.5 8
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
60d1m5ha2



not modelled 6.5 14
Fold:Ferredoxin-like
Superfamily:Formylmethanofuran:tetrahydromethanopterin formyltransferase
Family:Formylmethanofuran:tetrahydromethanopterin formyltransferase
61c5n6mA_



not modelled 6.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: structure of the membrane integral lipoprotein n-acyltransferase lnt2 from p. aeruginosa
62c2ps3A_



not modelled 5.9 16
PDB header:metal transport
Chain: A: PDB Molecule:high-affinity zinc uptake system protein znua;
PDBTitle: structure and metal binding properties of znua, a periplasmic zinc2 transporter from escherichia coli
63c4chmB_



not modelled 5.8 32
PDB header:cell cycle
Chain: B: PDB Molecule:imc sub-compartment protein isp1;
PDBTitle: structure of inner membrane complex (imc) sub-compartment protein 12 (isp1) from toxoplasma gondii
64d1rmga_



not modelled 5.7 14
Fold:Single-stranded right-handed beta-helix
Superfamily:Pectin lyase-like
Family:Galacturonase
65c2plqA_



not modelled 5.4 18
PDB header:hydrolase
Chain: A: PDB Molecule:aliphatic amidase;
PDBTitle: crystal structure of the amidase from geobacillus pallidus rapc8
66c4furD_



not modelled 5.2 28
PDB header:hydrolase
Chain: D: PDB Molecule:urease subunit gamma 2;
PDBTitle: crystal structure of urease subunit gamma 2 from brucella melitensis2 biovar abortus 2308
67d1u1ia1



not modelled 5.2 24
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain

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Transmembrane helix prediction 

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