Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3033_(-)_3393391_3393939
DateThu Aug 8 16:20:20 BST 2019
Unique Job IDf9de84416ea68b09
SequenceMAHSIVRTLL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.172 Y:46.708 Z:21.247
Model (left) based on template c3qooA_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of hot-dog-like taci_0573 protein from2 thermanaerovibrio acidaminovorans
Confidence and coverage
Confidence: 56.7% Coverage: 21%
39 residues ( 21% of your sequence) have been modelled with 56.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3qooA_
56.7 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of hot-dog-like taci_0573 protein from2 thermanaerovibrio acidaminovorans
2c2kwlA_
46.1 13
PDB header:lipid binding protein
Chain: A: PDB Molecule:acyl carrier protein;
PDBTitle: solution structure of acyl carrier protein from borrelia burgdorferi
3d2q78a1
37.4 22
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:TTHA0967-like
4c3kuvB_
35.9 15
PDB header:hydrolase
Chain: B: PDB Molecule:fluoroacetyl coenzyme a thioesterase;
PDBTitle: structural basis of the activity and substrate specificity of the2 fluoroacetyl-coa thioesterase flk - t42s mutant in complex with3 acetate.
5d1otfa_
33.1 25
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:4-oxalocrotonate tautomerase-like
6c2op8A_
29.8 17
PDB header:isomerase
Chain: A: PDB Molecule:probable tautomerase ywhb;
PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase
7c3ry0A_
28.9 25
PDB header:isomerase
Chain: A: PDB Molecule:putative tautomerase;
PDBTitle: crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in2 tomaymycin biosynthetic pathway
8c4fazB_
28.4 33
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate isomerase protein;
PDBTitle: kinetic and structural characterization of the 4-oxalocrotonate2 tautomerase isozymes from methylibium petroleiphilum
9c4fdxB_
27.8 21
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonase tautomerase isozyme;
PDBTitle: kinetic and structural characterization of the 4-oxalocrotonate2 tautomerase isozymes from methylibium petroleiphilum
10c3pgeA_
26.5 13
PDB header:dna binding protein
Chain: A: PDB Molecule:sumo-modified proliferating cell nuclear antigen;
PDBTitle: structure of sumoylated pcna
11c2ormA_
26.2 13
PDB header:isomerase
Chain: A: PDB Molecule:probable tautomerase hp0924;
PDBTitle: crystal structure of the 4-oxalocrotonate tautomerase homologue dmpi2 from helicobacter pylori.
12d2imha1
25.0 22
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:SPO2555-like
13c3m20A_
24.9 21
PDB header:isomerase
Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative;
PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution
14c3abfB_
23.6 29
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate tautomerase;
PDBTitle: crystal structure of a 4-oxalocrotonate tautomerase homologue2 (tthb242)
15d1bjpa_
23.5 17
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:4-oxalocrotonate tautomerase-like
16c3mb2G_
22.5 33
PDB header:isomerase
Chain: G: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - alpha subunit;
PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily
17c2k5dA_
22.1 38
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein sag0934;
PDBTitle: solution nmr structure of sag0934 from streptococcus2 agalactiae. northeast structural genomics target sar32[1-3 108].
18d1mwwa_
21.1 13
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:Hypothetical protein HI1388.1
19d1wm3a_
19.1 19
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
20c4lkbA_
18.2 22
PDB header:isomerase
Chain: A: PDB Molecule:hypothetical protein alr4568/putative 4-oxalocrotonate
PDBTitle: crystal structure of a putative 4-oxalocrotonate tautomerase from2 nostoc sp. pcc 7120
21d1gyxa_
not modelled 17.8 29
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:4-oxalocrotonate tautomerase-like
22c2x4kB_
not modelled 17.5 8
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate tautomerase;
PDBTitle: crystal structure of sar1376, a putative 4-oxalocrotonate2 tautomerase from the methicillin-resistant staphylococcus3 aureus (mrsa)
23d1x9la_
not modelled 16.9 17
Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:DR1885-like metal-binding protein
Family:DR1885-like metal-binding protein
24d2cwza1
not modelled 16.9 15
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:TTHA0967-like
25d2io3b1
not modelled 14.1 18
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
26d2aala1
not modelled 13.9 22
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MSAD-like
27c2dnwA_
not modelled 13.5 10
PDB header:transport protein
Chain: A: PDB Molecule:acyl carrier protein;
PDBTitle: solution structure of rsgi ruh-059, an acp domain of acyl2 carrier protein, mitochondrial [precursor] from human cdna
28d2af8a_
not modelled 12.6 6
Fold:Acyl carrier protein-like
Superfamily:ACP-like
Family:Acyl-carrier protein (ACP)
29c4hkgB_
not modelled 12.3 17
PDB header:phosphopantetheine binding protein
Chain: B: PDB Molecule:phosphopantetheine attachment site family protein;
PDBTitle: crystal structure of free-standing peptidyl carrier protein from2 uncharacterized acinetobacter baumannii secondary metabolic pathway
30d1mfbl2
not modelled 11.6 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
31c5mtwD_
not modelled 11.4 17
PDB header:chaperone
Chain: D: PDB Molecule:secb-like chaperone rv1957;
PDBTitle: mycobacterium tuberculosis rv1957 secb-like chaperone in complex with2 a chad peptide from rv1956 higa1 antitoxin
32d3by5a1
not modelled 10.3 14
Fold:CobE/GbiG C-terminal domain-like
Superfamily:CobE/GbiG C-terminal domain-like
Family:CobE/GbiG C-terminal domain-like
33c3by5A_
not modelled 10.3 14
PDB header:biosynthetic protein
Chain: A: PDB Molecule:cobalamin biosynthesis protein;
PDBTitle: crystal structure of cobalamin biosynthesis protein chig from2 agrobacterium tumefaciens str. c58
34d1h3ua1
not modelled 10.2 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
35c5uifC_
not modelled 9.4 22
PDB header:hydrolase
Chain: C: PDB Molecule:ps01740;
PDBTitle: crystal structure of native ps01740
36c4jvuA_
not modelled 9.3 25
PDB header:protein binding
Chain: A: PDB Molecule:ig mu chain c region membrane-bound form;
PDBTitle: igm c2-domain from mouse
37c2mvaA_
not modelled 9.3 46
PDB header:toxin
Chain: A: PDB Molecule:rhtx toxin;
PDBTitle: solution structure of the toxin, rhtx
38c5xqmA_
not modelled 9.2 15
PDB header:signaling protein
Chain: A: PDB Molecule:small ubiquitin-related modifier;
PDBTitle: nmr solution structure of smo1, sumo homologue in caenorhabditis2 elegans
39d1hc9a_
not modelled 9.2 40
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
40c5tdqA_
not modelled 9.1 12
PDB header:transport protein
Chain: A: PDB Molecule:golgi resident protein gcp60;
PDBTitle: crystal structure of the gold domain of acbd3
41d1rzfl2
not modelled 8.8 15
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
42d1mr6a_
not modelled 8.8 42
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
43c4ca3A_
not modelled 8.5 18
PDB header:ribosomal protein
Chain: A: PDB Molecule:hybrid polyketide synthase-non ribosomal peptide
PDBTitle: solution structure of streptomyces virginiae vira acp5b
44d1q46a1
not modelled 8.1 50
Fold:SAM domain-like
Superfamily:eIF2alpha middle domain-like
Family:eIF2alpha middle domain-like
45c4rudA_
not modelled 8.0 29
PDB header:toxin
Chain: A: PDB Molecule:three-finger toxin 3b;
PDBTitle: crystal structure of a three finger toxin
46c4rudB_
not modelled 8.0 29
PDB header:toxin
Chain: B: PDB Molecule:three-finger toxin 3b;
PDBTitle: crystal structure of a three finger toxin
47d1pg7w2
not modelled 7.9 5
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
48d1a5ra_
not modelled 7.8 16
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
49d1l6xa1
not modelled 7.8 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
50c5jp1B_
not modelled 7.4 23
PDB header:hydrolase
Chain: B: PDB Molecule:small ubiquitin-related modifier;
PDBTitle: structure of xanthomonas campestris effector protein xopd bound to2 tomato sumo
51c2lolA_
not modelled 7.4 7
PDB header:lipid transport
Chain: A: PDB Molecule:acyl carrier protein;
PDBTitle: nmr structure of an acyl-carrier protein from rickettsia prowazekii,2 seattle structural genomics center for infectious disease (ssgcid)
52d3eeqa1
not modelled 7.1 23
Fold:CobE/GbiG C-terminal domain-like
Superfamily:CobE/GbiG C-terminal domain-like
Family:CobE/GbiG C-terminal domain-like
53d1fp5a2
not modelled 7.0 17
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
54c3nbxX_
not modelled 6.9 17
PDB header:hydrolase
Chain: X: PDB Molecule:atpase rava;
PDBTitle: crystal structure of e. coli rava (regulatory atpase variant a) in2 complex with adp
55c2fvfA_
not modelled 6.8 11
PDB header:biosynthetic protein
Chain: A: PDB Molecule:acyl carrier protein;
PDBTitle: structure of 10:0-acp (protein with docked fatty acid)
56c3n4dF_
not modelled 6.7 26
PDB header:hydrolase
Chain: F: PDB Molecule:putative tautomerase;
PDBTitle: crystal structure of cg10062 inactivated by(r)-oxirane-2-carboxylate
57c2l76A_
not modelled 6.7 20
PDB header:transcription
Chain: A: PDB Molecule:nfatc2-interacting protein;
PDBTitle: solution nmr structure of human nfatc2ip ubiquitin-like domain,2 nfatc2ip_244_338, nesg target ht65a/ocsp target hs00387_244_338/sgc-3 toronto
58c4q9bA_
not modelled 6.5 20
PDB header:immune system
Chain: A: PDB Molecule:novel antigen receptor;
PDBTitle: ignar antibody domain c2
59c3d2uE_
not modelled 6.4 12
PDB header:immune system
Chain: E: PDB Molecule:ul18 protein;
PDBTitle: structure of ul18, a peptide-binding viral mhc mimic, bound to a host2 inhibitory receptor
60d1dx5i2
not modelled 6.3 25
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:EGF/Laminin
Family:EGF-type module
61c6c4qA_
not modelled 6.1 16
PDB header:transport protein
Chain: A: PDB Molecule:polyketide synthase pks13;
PDBTitle: 1.16 angstrom resolution crystal structure of acyl carrier protein2 domain (residues 1-100) of polyketide synthase pks13 from3 mycobacterium tuberculosis
62d2ozna1
not modelled 6.1 19
Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Carbohydrate-binding domain
Family:Cellulose-binding domain family III
63d2dyja1
not modelled 6.1 23
Fold:Alpha-lytic protease prodomain-like
Superfamily:Ribosome-binding factor A, RbfA
Family:Ribosome-binding factor A, RbfA
64d1kl9a1
not modelled 6.1 43
Fold:SAM domain-like
Superfamily:eIF2alpha middle domain-like
Family:eIF2alpha middle domain-like
65d2oz4a1
not modelled 6.1 17
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C2 set domains
66c4ba8A_
not modelled 5.9 12
PDB header:immune system
Chain: A: PDB Molecule:ig mu chain c region secreted form;
PDBTitle: high resolution nmr structure of the c mu3 domain from igm
67c4b1yM_
not modelled 5.9 25
PDB header:structural protein
Chain: M: PDB Molecule:phosphatase and actin regulator 1;
PDBTitle: structure of the phactr1 rpel-3 bound to g-actin
68d1o0va1
not modelled 5.7 16
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
69c3woaA_
not modelled 5.6 13
PDB header:dna binding protein, sugar binding prote
Chain: A: PDB Molecule:repressor protein ci, maltose-binding periplasmic protein;
PDBTitle: crystal structure of lambda repressor (1-45) fused with maltose-2 binding protein
70c2mklC_
not modelled 5.6 16
PDB header:immune system
Chain: C: PDB Molecule:novel antigen receptor;
PDBTitle: solution structure of the fourth constant immunoglobulin domain of2 nurse shark ignar
71c3dj9A_
not modelled 5.6 23
PDB header:immune system
Chain: A: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: crystal structure of an isolated, unglycosylated antibody ch2 domain
72c1jnhC_
not modelled 5.5 12
PDB header:immune system
Chain: C: PDB Molecule:monoclonal anti-estradiol 10g6d6 fab light chain;
PDBTitle: crystal structure of fab-estradiol complexes
73c3cgnA_
not modelled 5.4 24
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: crystal structure of thermophilic slyd
74d1fnna2
not modelled 5.4 8
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
75d2w6ka1
not modelled 5.4 9
Fold:CobE/GbiG C-terminal domain-like
Superfamily:CobE/GbiG C-terminal domain-like
Family:CobE/GbiG C-terminal domain-like
76d1kbaa_
not modelled 5.4 25
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
77d1deeb2
not modelled 5.3 10
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C1 set domains (antibody constant domain-like)
78c4q97B_
not modelled 5.3 15
PDB header:immune system
Chain: B: PDB Molecule:novel antigen receptor;
PDBTitle: ignar antibody domain c1
79d1whqa_
not modelled 5.2 15
Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Double-stranded RNA-binding domain (dsRBD)
80d1txba_
not modelled 5.1 40
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
81c4nfuB_
not modelled 5.1 21
PDB header:signaling protein
Chain: B: PDB Molecule:senescence-associated carboxylesterase 101;
PDBTitle: structure of the central plant immunity signaling node eds1 in complex2 with its interaction partner sag101
82d1ntna_
not modelled 5.1 30
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins

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