Phyre 2 Results for RVBD3064c_(-)_3429822

Email	mdejesus@rockefeller.edu
Description	RVBD3064c_(-)_3429822_3430247
Date	Thu Aug 8 16:20:24 BST 2019
Unique Job ID	0a4946e8579dab15
Sequence	MVKDLDRRLA ... Download FASTA
Job Type	normal
Job Expiry

Summary

Top model

Image coloured by rainbow N → C terminus

Model dimensions (Å):

X:21.971 Y:24.291 Z:21.278

Model (left) based on template c2uwjE_

Top template information

PDB header:chaperone
Chain: E: PDB Molecule:type iii export protein psce;
PDBTitle: structure of the heterotrimeric complex which regulates type iii2 secretion needle formation

Confidence and coverage

Confidence:

18.8%

Coverage:

15%

21 residues ( 15% of your sequence) have been modelled with 18.8% confidence by the single highest scoring template.

You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.

Please note: You must be registered and logged in to use Phyrealarm.

3D viewing

Interactive 3D view in JSmol

For other options to view your downloaded structure offline see the FAQ

Sequence analysis

Download FASTA version

Secondary structure and disorder prediction [Show]

Domain analysis [Show]

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence	M	V	K	D	L	D	R	R	L	A	G	C	L	P	A	V	L	S	L	F	R	L	V	Y	G	L	L	F	A	G	Y	G	S	M	I	L	F	G	W	P	V	T	S	A	Q	P	V	E	F	G	S	W	P	G	W	Y	A	G	V	I
Secondary structure
SS confidence
Disorder	?	?	?	?																																					?	?	?	?	?	?	?	?	?	?	?
Disorder confidence

	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence	E	L	V	A	G	L	L	I	A	T	G	L	F	T	R	A	V	A	F	V	A	S	G	E	M	A	V	A	Y	F	W	M	H	Q	P	Y	A	L	W	P	I	G	G	P	P	D	G	N	G	G	T	P	A	I	L	F	C	F	G	F
Secondary structure
SS confidence
Disorder																																												?	?	?	?
Disorder confidence

	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Sequence	F	L	L	V	F	T	G	G	G	I	Y	S	I	D	A	R	R	T	V	T	A
Secondary structure
SS confidence
Disorder															?	?	?	?	?	?	?
Disorder confidence

PDB 2uwj chain E