Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3069_(ccrB)_3433689_3434087
DateThu Aug 8 16:20:24 BST 2019
Unique Job ID707c4be2c4e726f0
SequenceVPNHDYRELA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:25.538 Y:51.347 Z:42.919
Model (left) based on template c5a43B_
Top template information
PDB header:transport protein
Chain: B: PDB Molecule:putative fluoride ion transporter crcb;
PDBTitle: crystal structure of a dual topology fluoride ion channel.
Confidence and coverage
Confidence:100.0% Coverage: 94%
124 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5a43B_



100.0 27
PDB header:transport protein
Chain: B: PDB Molecule:putative fluoride ion transporter crcb;
PDBTitle: crystal structure of a dual topology fluoride ion channel.
2c5a40C_



100.0 35
PDB header:transport protein
Chain: C: PDB Molecule:putative fluoride ion transporter crcb;
PDBTitle: crystal structure of a dual topology fluoride ion channel.
3c4hzuS_



56.1 10
PDB header:hydrolase, transport protein
Chain: S: PDB Molecule:predicted membrane protein;
PDBTitle: structure of a bacterial energy-coupling factor transporter
4c3hd6A_



42.1 11
PDB header:membrane protein, transport protein
Chain: A: PDB Molecule:ammonium transporter rh type c;
PDBTitle: crystal structure of the human rhesus glycoprotein rhcg
5c5egiB_



18.0 15
PDB header:membrane protein
Chain: B: PDB Molecule:uncharacterized protein y57a10a.10;
PDBTitle: structure of a trimeric intracellular cation channel from c. elegans2 with bound ca2+
6c5eikA_



17.6 18
PDB header:membrane protein
Chain: A: PDB Molecule:uncharacterized protein y57a10a.28;
PDBTitle: structure of a trimeric intracellular cation channel from c. elegans2 in the absence of ca2+
7c5edlA_



14.6 14
PDB header:transport protein
Chain: A: PDB Molecule:putative hmp/thiamine permease protein ykoe;
PDBTitle: crystal structure of an s-component of ecf transporter
8c2d10F_



13.4 29
PDB header:cell adhesion
Chain: F: PDB Molecule:ezrin-radixin-moesin binding phosphoprotein 50;
PDBTitle: crystal structure of the radixin ferm domain complexed with2 the nherf-1 c-terminal tail peptide
9c2d10H_



13.4 29
PDB header:cell adhesion
Chain: H: PDB Molecule:ezrin-radixin-moesin binding phosphoprotein 50;
PDBTitle: crystal structure of the radixin ferm domain complexed with2 the nherf-1 c-terminal tail peptide
10c2d10G_



13.4 29
PDB header:cell adhesion
Chain: G: PDB Molecule:ezrin-radixin-moesin binding phosphoprotein 50;
PDBTitle: crystal structure of the radixin ferm domain complexed with2 the nherf-1 c-terminal tail peptide
11c2d10E_



13.4 29
PDB header:cell adhesion
Chain: E: PDB Molecule:ezrin-radixin-moesin binding phosphoprotein 50;
PDBTitle: crystal structure of the radixin ferm domain complexed with2 the nherf-1 c-terminal tail peptide
12c1sghB_



11.7 29
PDB header:structural protein
Chain: B: PDB Molecule:ezrin-radixin-moesin binding phosphoprotein 50;
PDBTitle: moesin ferm domain bound to ebp50 c-terminal peptide
13c5aezA_



10.9 13
PDB header:membrane protein
Chain: A: PDB Molecule:mep2;
PDBTitle: crystal structure of candida albicans mep2
14c5aexJ_



9.8 11
PDB header:membrane protein
Chain: J: PDB Molecule:ammonium transporter mep2;
PDBTitle: crystal structure of saccharomyces cerevisiae mep2
15c3orgB_



9.2 13
PDB header:transport protein
Chain: B: PDB Molecule:cmclc;
PDBTitle: crystal structure of a eukaryotic clc transporter
16c5ws4A_



8.8 20
PDB header:membrane protein
Chain: A: PDB Molecule:macrolide export atp-binding/permease protein macb;
PDBTitle: crystal structure of tripartite-type abc transporter macb from2 acinetobacter baumannii
17c5lj7B_



8.7 15
PDB header:transport protein
Chain: B: PDB Molecule:macrolide export atp-binding/permease protein macb;
PDBTitle: structure of aggregatibacter actinomycetemcomitans macb bound to atp2 (p21)
18c5xvjB_



7.9 29
PDB header:gene regulation
Chain: B: PDB Molecule:phd finger protein alfin-like 7;
PDBTitle: crystal structure of al7 pal domain
19c2d11G_



7.5 40
PDB header:cell adhesion
Chain: G: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2;
PDBTitle: crystal structure of the radixin ferm domain complexed with2 the nherf-2 c-terminal tail peptide
20c2d11H_



7.5 40
PDB header:cell adhesion
Chain: H: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2;
PDBTitle: crystal structure of the radixin ferm domain complexed with2 the nherf-2 c-terminal tail peptide
21c2d11F_



not modelled 7.5 40
PDB header:cell adhesion
Chain: F: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2;
PDBTitle: crystal structure of the radixin ferm domain complexed with2 the nherf-2 c-terminal tail peptide
22c2d11E_



not modelled 7.5 40
PDB header:cell adhesion
Chain: E: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2;
PDBTitle: crystal structure of the radixin ferm domain complexed with2 the nherf-2 c-terminal tail peptide
23c4m48A_



not modelled 7.5 10
PDB header:transport protein
Chain: A: PDB Molecule:transporter;
PDBTitle: x-ray structure of dopamine transporter elucidates antidepressant2 mechanism
24c2xokG_



not modelled 7.4 50
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase subunit gamma, mitochondrial;
PDBTitle: refined structure of yeast f1c10 atpase complex to 3 a resolution
25c2w6hG_



not modelled 6.0 50
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase subunit gamma, mitochondrial;
PDBTitle: low resolution structures of bovine mitochondrial f1-atpase during2 controlled dehydration: hydration state 4a.
26c3gn8C_



not modelled 5.9 44
PDB header:hormone/hormone activator
Chain: C: PDB Molecule:nuclear receptor coactivator 2;
PDBTitle: x-ray crystal structure of ancgr2 in complex with2 dexamethasone
27c3gn8E_



not modelled 5.7 44
PDB header:hormone/hormone activator
Chain: E: PDB Molecule:nuclear receptor coactivator 2;
PDBTitle: x-ray crystal structure of ancgr2 in complex with2 dexamethasone
28c2qe7G_



not modelled 5.3 38
PDB header:hydrolase
Chain: G: PDB Molecule:atp synthase subunit gamma;
PDBTitle: crystal structure of the f1-atpase from the thermoalkaliphilic2 bacterium bacillus sp. ta2.a1
29d2jdig1



not modelled 5.3 50
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:ATP synthase (F1-ATPase), gamma subunit
Family:ATP synthase (F1-ATPase), gamma subunit
30d1fs0g_



not modelled 5.2 75
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:ATP synthase (F1-ATPase), gamma subunit
Family:ATP synthase (F1-ATPase), gamma subunit

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below