Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3107c_(agpS)_3475375_3476958
DateThu Aug 8 16:20:28 BST 2019
Unique Job ID1c9d7d40d3df6456
SequenceMRSWWGWGTV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:79.719 Y:51.178 Z:70.701
Model (left) based on template c4bc9C_
Top template information
PDB header:transferase
Chain: C: PDB Molecule:alkyldihydroxyacetonephosphate synthase, peroxisomal;
PDBTitle: mammalian alkyldihydroxyacetonephosphate synthase: wild-type, adduct2 with cyanoethyl
Confidence and coverage
Confidence:100.0% Coverage: 97%
513 residues ( 97% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4bc9C_
100.0 27
PDB header:transferase
Chain: C: PDB Molecule:alkyldihydroxyacetonephosphate synthase, peroxisomal;
PDBTitle: mammalian alkyldihydroxyacetonephosphate synthase: wild-type, adduct2 with cyanoethyl
2c2uuvC_
100.0 32
PDB header:transferase
Chain: C: PDB Molecule:alkyldihydroxyacetonephosphate synthase;
PDBTitle: alkyldihydroxyacetonephosphate synthase in p1
3c3pm9A_
100.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of a putative dehydrogenase (rpa1076) from2 rhodopseudomonas palustris cga009 at 2.57 a resolution
4c1ahuB_
100.0 15
PDB header:flavoenzyme
Chain: B: PDB Molecule:vanillyl-alcohol oxidase;
PDBTitle: structure of the octameric flavoenzyme vanillyl-alcohol2 oxidase in complex with p-cresol
5c5fxpA_
100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:eugenol oxidase;
PDBTitle: crystal structure of eugenol oxidase in complex with2 vanillin
6c1wveB_
100.0 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:4-cresol dehydrogenase [hydroxylating]
PDBTitle: p-cresol methylhydroxylase: alteration of the structure of2 the flavoprotein subunit upon its binding to the3 cytochrome subunit
7c1f0xA_
100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-lactate dehydrogenase;
PDBTitle: crystal structure of d-lactate dehydrogenase, a peripheral membrane2 respiratory enzyme.
8c4oalB_
100.0 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytokinin dehydrogenase 4;
PDBTitle: crystal structure of maize cytokinin oxidase/dehydrogenase 4 (zmcko4)2 in complex with phenylurea inhibitor cppu in alternative spacegroup
9c3bw7A_
100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytokinin dehydrogenase 1;
PDBTitle: maize cytokinin oxidase/dehydrogenase complexed with the allenic2 cytokinin analog ha-1
10c4ml8C_
100.0 15
PDB header:oxidoreductase
Chain: C: PDB Molecule:cytokinin oxidase 2;
PDBTitle: structure of maize cytokinin oxidase/dehydrogenase 2 (zmcko2)
11c6f73B_
100.0 12
PDB header:flavoprotein
Chain: B: PDB Molecule:mtvao615;
PDBTitle: crystal structure of vao-type flavoprotein mtvao615 at ph 5.0 from2 myceliophthora thermophila c1
12c6f74B_
100.0 10
PDB header:flavoprotein
Chain: B: PDB Molecule:alcohol oxidase;
PDBTitle: crystal structure of vao-type flavoprotein mtvao713 from2 myceliophthora thermophila c1
13c3vteA_
100.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:tetrahydrocannabinolic acid synthase;
PDBTitle: crystal structure of tetrahydrocannabinolic acid synthase from2 cannabis sativa
14c6c80B_
100.0 14
PDB header:immune system
Chain: B: PDB Molecule:cytokinin oxidase luckx1.1;
PDBTitle: crystal structure of a flax cytokinin oxidase
15c2bvfA_
100.0 14
PDB header:oxidase
Chain: A: PDB Molecule:6-hydroxy-d-nicotine oxidase;
PDBTitle: crystal structure of 6-hydoxy-d-nicotine oxidase from2 arthrobacter nicotinovorans. crystal form 3 (p1)
16c2exrA_
100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytokinin dehydrogenase 7;
PDBTitle: x-ray structure of cytokinin oxidase/dehydrogenase (ckx) from2 arabidopsis thaliana at5g21482
17c3w8wA_
100.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative fad-dependent oxygenase encm;
PDBTitle: the crystal structure of encm
18c4ud8B_
100.0 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:fad-binding and bbe domain-containing protein;
PDBTitle: atbbe15
19c3rjaA_
100.0 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:carbohydrate oxidase;
PDBTitle: crystal structure of carbohydrate oxidase from microdochium nivale in2 complex with substrate analogue
20c6eo5A_
100.0 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:ppbbe-like 1 d396n;
PDBTitle: physcomitrella patens bbe-like 1 variant d396n
21c3tsjA_
not modelled 100.0 13
PDB header:allergen, oxidoreductase
Chain: A: PDB Molecule:pollen allergen phl p 4;
PDBTitle: crystal structure of phl p 4, a grass pollen allergen with glucose2 dehydrogenase activity
22c5l6fA_
not modelled 100.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:fad linked oxidase-like protein;
PDBTitle: xylooligosaccharide oxidase from myceliophthora thermophila c1 in2 complex with xylobiose
23c3fwaA_
not modelled 100.0 13
PDB header:flavoprotein
Chain: A: PDB Molecule:reticuline oxidase;
PDBTitle: structure of berberine bridge enzyme, c166a variant in complex with2 (s)-reticuline
24c4fdoA_
not modelled 100.0 14
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: A: PDB Molecule:oxidoreductase dpre1;
PDBTitle: mycobacterium tuberculosis dpre1 in complex with ct319
25c3d2hA_
not modelled 100.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:berberine bridge-forming enzyme;
PDBTitle: structure of berberine bridge enzyme from eschscholzia californica,2 monoclinic crystal form
26c1zr6A_
not modelled 100.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:glucooligosaccharide oxidase;
PDBTitle: the crystal structure of an acremonium strictum glucooligosaccharide2 oxidase reveals a novel flavinylation
27c5d79B_
not modelled 100.0 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:berberine bridge enzyme-like protein;
PDBTitle: structure of bbe-like #28 from arabidopsis thaliana
28c3popD_
not modelled 100.0 15
PDB header:oxidoreductase
Chain: D: PDB Molecule:gilr oxidase;
PDBTitle: the crystal structure of gilr, an oxidoreductase that catalyzes the2 terminal step of gilvocarcin biosynthesis
29c5i1wD_
not modelled 100.0 16
PDB header:oxidoreductase
Chain: D: PDB Molecule:crmk;
PDBTitle: crystal structure of crmk, a flavoenzyme involved in the shunt product2 recycling mechanism in caerulomycin biosynthesis
30c2ipiD_
not modelled 100.0 15
PDB header:oxidoreductase
Chain: D: PDB Molecule:aclacinomycin oxidoreductase (aknox);
PDBTitle: crystal structure of aclacinomycin oxidoreductase
31c2vfvA_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:xylitol oxidase;
PDBTitle: alditol oxidase from streptomyces coelicolor a3(2): complex2 with sulphite
32c2y3rC_
not modelled 100.0 15
PDB header:oxidoreductase
Chain: C: PDB Molecule:taml;
PDBTitle: structure of the tirandamycin-bound fad-dependent tirandamycin oxidase2 taml in p21 space group
33c2wdwB_
not modelled 100.0 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative hexose oxidase;
PDBTitle: the native crystal structure of the primary hexose oxidase (2 dbv29) in antibiotic a40926 biosynthesis
34c1i19B_
not modelled 100.0 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:cholesterol oxidase;
PDBTitle: crystal structure of cholesterol oxidase from b.sterolicum
35c3js8A_
not modelled 100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:cholesterol oxidase;
PDBTitle: solvent-stable cholesterol oxidase
36d1e8ga2
not modelled 100.0 19
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
37d1wvfa2
not modelled 100.0 15
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
38d1f0xa2
not modelled 100.0 18
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
39d1w1oa2
not modelled 100.0 17
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
40d2i0ka2
not modelled 100.0 19
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
41d1uxya1
not modelled 100.0 14
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
42d1hska1
not modelled 100.0 17
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
43c4jayC_
not modelled 100.0 20
PDB header:oxidoreductase
Chain: C: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: crystal structure of p. aeruginosa murb in complex with nadp+
44c4pytA_
not modelled 100.0 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: crystal structure of a murb family ep-udp-n-acetylglucosamine2 reductase
45c2yvsA_
not modelled 100.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:glycolate oxidase subunit glce;
PDBTitle: crystal structure of glycolate oxidase subunit glce from thermus2 thermophilus hb8
46c1hskA_
not modelled 99.9 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: crystal structure of s. aureus murb
47d1e8ga1
not modelled 99.9 13
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:Vanillyl-alcohol oxidase-like
48c1mbbA_
not modelled 99.9 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:uridine diphospho-n-acetylenolpyruvylglucosamine
PDBTitle: oxidoreductase
49d1wvfa1
not modelled 99.9 14
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:Vanillyl-alcohol oxidase-like
50c3i99A_
not modelled 99.9 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: the crystal structure of the udp-n-acetylenolpyruvoylglucosamine2 reductase from the vibrio cholerae o1 biovar tor
51c5jzxB_
not modelled 99.9 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: crystal structure of udp-n-acetylenolpyruvoylglucosamine reductase2 (murb) from mycobacterium tuberculosis
52d1f0xa1
not modelled 99.9 13
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:D-lactate dehydrogenase
53c2gquA_
not modelled 99.7 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:udp-n-acetylenolpyruvylglucosamine reductase;
PDBTitle: crystal structure of udp-n-acetylenolpyruvylglucosamine2 reductase (murb) from thermus caldophilus
54d1w1oa1
not modelled 99.0 16
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:Cytokinin dehydrogenase 1
55c5y6qB_
not modelled 97.8 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:aldehyde oxidase medium subunit;
PDBTitle: crystal structure of an aldehyde oxidase from methylobacillus sp.2 ky4400
56d1ffvc2
not modelled 97.6 19
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
57c5g5hB_
not modelled 97.6 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative xanthine dehydrogenase yags fad-binding subunit;
PDBTitle: escherichia coli periplasmic aldehyde oxidase r440h mutant
58c1n62C_
not modelled 97.5 22
PDB header:oxidoreductase
Chain: C: PDB Molecule:carbon monoxide dehydrogenase medium chain;
PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state
59c1ffuF_
not modelled 97.5 18
PDB header:hydrolase
Chain: F: PDB Molecule:cutm, flavoprotein of carbon monoxide
PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava which lacks the mo-pyranopterin moiety of the3 molybdenum cofactor
60d1n62c2
not modelled 97.4 20
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
61c1t3qF_
not modelled 97.3 24
PDB header:oxidoreductase
Chain: F: PDB Molecule:quinoline 2-oxidoreductase medium subunit;
PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86
62d1t3qc2
not modelled 97.2 24
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
63c3hrdC_
not modelled 97.2 25
PDB header:oxidoreductase
Chain: C: PDB Molecule:nicotinate dehydrogenase fad-subunit;
PDBTitle: crystal structure of nicotinate dehydrogenase
64d1v97a6
not modelled 97.1 15
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
65d3b9jb2
not modelled 97.1 14
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
66c3etrM_
not modelled 97.1 14
PDB header:oxidoreductase
Chain: M: PDB Molecule:xanthine dehydrogenase/oxidase;
PDBTitle: crystal structure of xanthine oxidase in complex with lumazine
67c3b9jJ_
not modelled 97.0 14
PDB header:oxidoreductase
Chain: J: PDB Molecule:xanthine oxidase;
PDBTitle: structure of xanthine oxidase with 2-hydroxy-6-methylpurine
68c4zohB_
not modelled 97.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase fad-binding subunit;
PDBTitle: crystal structure of glyceraldehyde oxidoreductase
69c1rm6E_
not modelled 96.8 25
PDB header:oxidoreductase
Chain: E: PDB Molecule:4-hydroxybenzoyl-coa reductase beta subunit;
PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica
70d1jroa4
not modelled 96.7 18
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
71c2w3rG_
not modelled 96.7 18
PDB header:oxidoreductase
Chain: G: PDB Molecule:xanthine dehydrogenase;
PDBTitle: crystal structure of xanthine dehydrogenase (desulfo form)2 from rhodobacter capsulatus in complex with hypoxanthine
72d1rm6b2
not modelled 96.5 25
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
73c1wygA_
not modelled 96.2 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase;
PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s)
74c3zyvA_
not modelled 95.0 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:aox3;
PDBTitle: crystal structure of the mouse liver aldehyde oxidase 3 (maox3)
75c4uhxA_
not modelled 92.6 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidase;
PDBTitle: human aldehyde oxidase in complex with phthalazine and thioridazine
76d2i0ka1
not modelled 92.5 9
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:Cholesterol oxidase
77c6je8A_
not modelled 79.6 38
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: crystal structure of a beta-n-acetylhexosaminidase
78d1jaka1
not modelled 79.3 14
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
79c5oarB_
not modelled 78.1 38
PDB header:hydrolase
Chain: B: PDB Molecule:beta-hexosaminidase;
PDBTitle: crystal structure of native beta-n-acetylhexosaminidase isolated from2 aspergillus oryzae
80c4h04B_
not modelled 78.0 33
PDB header:hydrolase
Chain: B: PDB Molecule:lacto-n-biosidase;
PDBTitle: lacto-n-biosidase from bifidobacterium bifidum
81d1yhta1
not modelled 77.9 29
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
82d1nowa1
not modelled 77.1 33
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
83d1qbaa3
not modelled 77.0 43
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
84c3nsnA_
not modelled 77.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylglucosaminidase;
PDBTitle: crystal structure of insect beta-n-acetyl-d-hexosaminidase ofhex12 complexed with tmg-chitotriomycin
85d2gjxa1
not modelled 76.5 33
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
86c1nouA_
not modelled 76.1 33
PDB header:hydrolase
Chain: A: PDB Molecule:beta-hexosaminidase beta chain;
PDBTitle: native human lysosomal beta-hexosaminidase isoform b
87c3rcnA_
not modelled 76.0 29
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: crystal structure of beta-n-acetylhexosaminidase from arthrobacter2 aurescens
88c3gh7A_
not modelled 75.9 29
PDB header:hydrolase
Chain: A: PDB Molecule:beta-hexosaminidase;
PDBTitle: crystal structure of beta-hexosaminidase from paenibacillus sp. ts122 in complex with galnac
89c2yl8A_
not modelled 75.7 29
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis
90c1m04A_
not modelled 75.6 14
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: mutant streptomyces plicatus beta-hexosaminidase (d313n) in complex2 with product (glcnac)
91c6ezrA_
not modelled 75.4 29
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylglucosaminidase nag2;
PDBTitle: crystal structure of gh20 exo beta-n-acetylglucosaminidase from vibrio2 harveyi
92c2gjxE_
not modelled 74.6 33
PDB header:hydrolase
Chain: E: PDB Molecule:beta-hexosaminidase alpha chain;
PDBTitle: crystallographic structure of human beta-hexosaminidase a
93c2ylaA_
not modelled 74.5 19
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis
94c1no8A_
not modelled 73.5 21
PDB header:rna binding protein
Chain: A: PDB Molecule:aly;
PDBTitle: solution structure of the nuclear factor aly rbd domain
95d1no8a_
not modelled 73.5 21
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
96c3lmyA_
not modelled 73.4 33
PDB header:hydrolase
Chain: A: PDB Molecule:beta-hexosaminidase subunit beta;
PDBTitle: the crystal structure of beta-hexosaminidase b in complex with2 pyrimethamine
97c2mzqA_
not modelled 73.3 21
PDB header:rna binding protein
Chain: A: PDB Molecule:single-strand telomeric dna-binding protein gbp2;
PDBTitle: nmr structure of the rrm3 domain of gbp2
98c1qbaA_
not modelled 73.1 43
PDB header:glycosyl hydrolase
Chain: A: PDB Molecule:chitobiase;
PDBTitle: bacterial chitobiase, glycosyl hydrolase family 20
99c3rpmA_
not modelled 72.3 29
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetyl-hexosaminidase;
PDBTitle: crystal structure of the first gh20 domain of a novel beta-n-acetyl-2 hexosaminidase strh from streptococcus pneumoniae r6
100c4pysB_
not modelled 72.1 33
PDB header:hydrolase
Chain: B: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: the crystal structure of beta-n-acetylhexosaminidase from bacteroides2 fragilis nctc 9343
101c2epoB_
not modelled 68.3 14
PDB header:hydrolase
Chain: B: PDB Molecule:n-acetyl-beta-d-glucosaminidase;
PDBTitle: n-acetyl-b-d-glucosaminidase (gcna) from streptococcus gordonii
102c2dnoA_
not modelled 68.1 20
PDB header:rna binding protein
Chain: A: PDB Molecule:trinucleotide repeat containing 4 variant;
PDBTitle: solution structure of rna binding domain in trinucleotide2 repeat containing 4 variant
103c4wikA_
not modelled 63.9 21
PDB header:transcription
Chain: A: PDB Molecule:splicing factor, proline- and glutamine-rich;
PDBTitle: human splicing factor, construct 2
104c2dgxA_
not modelled 63.5 11
PDB header:rna binding protein
Chain: A: PDB Molecule:kiaa0430 protein;
PDBTitle: solution structure of the rna recognition motif in kiaa04302 protein
105d1fhta_
not modelled 63.0 14
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
106c2yswB_
not modelled 61.5 19
PDB header:lyase
Chain: B: PDB Molecule:3-dehydroquinate dehydratase;
PDBTitle: crystal structure of the 3-dehydroquinate dehydratase from aquifex2 aeolicus vf5
107c5ac4A_
not modelled 61.3 10
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetyl-beta-d-glucosaminidase;
PDBTitle: gh20c, beta-hexosaminidase from streptococcus pneumoniae in complex2 with galnac
108d2bi7a1
not modelled 60.7 18
Fold:Nucleotide-binding domain
Superfamily:Nucleotide-binding domain
Family:UDP-galactopyranose mutase, N-terminal domain
109d1x5oa1
not modelled 60.2 10
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
110c6n2nA_
not modelled 58.5 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate flavodoxin/ferredoxin oxidoreductase domain
PDBTitle: crystal structure of 2-oxoglutarate:ferredoxin oxidoreductase from2 magnetococcus marinus
111d2k3ka1
not modelled 58.0 15
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
112c2fy1A_
not modelled 57.4 17
PDB header:structural protein/rna
Chain: A: PDB Molecule:rna-binding motif protein, y chromosome, family 1 member
PDBTitle: a dual mode of rna recognition by the rbmy protein
113c1qupA_
not modelled 56.8 11
PDB header:chaperone
Chain: A: PDB Molecule:superoxide dismutase 1 copper chaperone;
PDBTitle: crystal structure of the copper chaperone for superoxide dismutase
114c2mztA_
not modelled 55.9 22
PDB header:rna binding protein
Chain: A: PDB Molecule:protein hrb1;
PDBTitle: nmr structure of the rrm3 domain of hrb1
115c6em5o_
not modelled 55.7 18
PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l16-a;
PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
116c1jk9D_
not modelled 55.2 11
PDB header:oxidoreductase
Chain: D: PDB Molecule:copper chaperone for superoxide dismutase;
PDBTitle: heterodimer between h48f-ysod1 and yccs
117c2i38A_
not modelled 52.5 22
PDB header:rna binding protein/chimera
Chain: A: PDB Molecule:fusion protein consists of immunoglobulin g-binding protein
PDBTitle: solution structure of the rrm of srp20
118c6r5kH_
not modelled 52.4 14
PDB header:rna binding protein
Chain: H: PDB Molecule:polyadenylate-binding protein, cytoplasmic and nuclear;
PDBTitle: cryo-em structure of a poly(a) rnp bound to the pan2-pan3 deadenylase
119d2ftsa3
not modelled 51.4 18
Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MoeA central domain-like
120d1di6a_
not modelled 51.3 13
Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MogA-like

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below