Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3126c_(-)_3491805_3492119
DateThu Aug 8 16:20:31 BST 2019
Unique Job IDbb400b3ecec59672
SequenceMVIRFDQIGS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.238 Y:38.707 Z:31.545
Model (left) based on template d2fb5a1
Top template information
Fold:YojJ-like
Superfamily:YojJ-like
Family:YojJ-like
Confidence and coverage
Confidence: 48.2% Coverage: 54%
56 residues ( 54% of your sequence) have been modelled with 48.2% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2fb5a1



48.2 21
Fold:YojJ-like
Superfamily:YojJ-like
Family:YojJ-like
2c3brvB_



23.2 38
PDB header:transferase/transcription
Chain: B: PDB Molecule:nf-kappa-b essential modulator;
PDBTitle: nemo/ikkb association domain structure
3c3msvB_



14.5 16
PDB header:protein binding
Chain: B: PDB Molecule:nuclear import adaptor, nro1;
PDBTitle: the hypoxic regulator of sterol synthesis nro1 is a nuclear import2 adaptor
4c1yodB_



10.8 50
PDB header:de novo protein
Chain: B: PDB Molecule:water-solublized phospholamban;
PDBTitle: crystal structure of a water soluble analog of phospholamban
5c1yodA_



9.9 50
PDB header:de novo protein
Chain: A: PDB Molecule:water-solublized phospholamban;
PDBTitle: crystal structure of a water soluble analog of phospholamban
6c3qtmB_



9.9 25
PDB header:translation
Chain: B: PDB Molecule:uncharacterized protein c4b3.07;
PDBTitle: structure of s. pombe nuclear import adaptor nro1 (space group p21)
7c3jqhA_



9.5 53
PDB header:sugar binding protein
Chain: A: PDB Molecule:c-type lectin domain family 4 member m;
PDBTitle: structure of the neck region of the glycan-binding receptor dc-signr
8c5iy3A_



9.1 44
PDB header:viral protein
Chain: A: PDB Molecule:genome polyprotein;
PDBTitle: zika virus non-structural protein ns1
9c5yxaC_



8.7 30
PDB header:viral protein
Chain: C: PDB Molecule:non-structural protein 1;
PDBTitle: crystal structure of the c-terminal fragment of ns1 protein from2 yellow fever virus
10c6rdf7_



8.7 26
PDB header:proton transport
Chain: 7: PDB Molecule:mitochondrial atp synthase associated protein asa7;
PDBTitle: cryoem structure of polytomella f-atp synthase, primary rotary state2 3, monomer-masked refinement
11c4o6cB_



8.1 45
PDB header:viral protein
Chain: B: PDB Molecule:ns1;
PDBTitle: west nile virus non-structural protein 1 (ns1) form 2 crystal
12d1zpsa1



8.0 37
Fold:HisI-like
Superfamily:HisI-like
Family:HisI-like
13c5k6kB_



7.5 44
PDB header:viral protein
Chain: B: PDB Molecule:zika virus protein;
PDBTitle: zika virus non-structural protein 1 (ns1)
14d2db7a1



7.3 36
Fold:Orange domain-like
Superfamily:Orange domain-like
Family:Hairy Orange domain
15c2lqlA_



7.3 50
PDB header:protein binding
Chain: A: PDB Molecule:coiled-coil-helix-coiled-coil-helix domain-containing
PDBTitle: solution structure of chch5
16d1v54i_



6.2 16
Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIc
Family:Mitochondrial cytochrome c oxidase subunit VIc
17d1dnpa1



6.0 27
Fold:Cryptochrome/photolyase FAD-binding domain
Superfamily:Cryptochrome/photolyase FAD-binding domain
Family:Cryptochrome/photolyase FAD-binding domain
18c4o6bA_



6.0 56
PDB header:viral protein
Chain: A: PDB Molecule:non-structural protein 1;
PDBTitle: dengue type2 virus non-structural protein 1 (ns1) form 1 crystal
19c2n2uA_



5.8 100
PDB header:unknown function, structural genomics
Chain: A: PDB Molecule:or358;
PDBTitle: solution nmr structure of de novo designed ferredoxin fold protein2 sfr3, northeast structural genomics consortium (nesg) target or358
20c5yylC_



5.6 56
PDB header:signaling protein
Chain: C: PDB Molecule:apisimin;
PDBTitle: structure of major royal jelly protein 1 oligomer
21d1j75a_



not modelled 5.4 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Z-DNA binding domain

Binding site prediction 

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