Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3135_(PPE50)_3501331_3501729
DateThu Aug 8 16:20:32 BST 2019
Unique Job ID0118182f01349829
SequenceMDYAFLPPEI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:61.540 Y:69.729 Z:71.664
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 96%
127 residues ( 96% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_
100.0 51
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38b1
100.0 32
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c2g38B_
100.0 32
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c4xy3A_
100.0 17
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
98.5 17
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
97.8 13
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c3gvmA_
97.6 16
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
8c4iogD_
97.5 17
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
9c3zbhC_
97.4 15
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
96.7 18
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsB_
95.2 12
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12c4lwsA_
95.0 18
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
13d1wa8b1
94.5 13
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
14c4i0xA_
91.7 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
15c2kg7B_
86.5 19
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4i0xJ_
29.2 16
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17c1bkvA_
22.3 50
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
18c1bkvB_
20.9 50
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
19c1bkvC_
20.9 50
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
20c5frgA_
13.8 63
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
21c2iu1A_
not modelled 13.4 14
PDB header:transcription
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of eif5 c-terminal domain
22c2y5tG_
not modelled 11.7 67
PDB header:immune system
Chain: G: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
23c2y5tE_
not modelled 11.1 67
PDB header:immune system
Chain: E: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
24c4gyxC_
not modelled 9.9 45
PDB header:structural protein, blood clotting
Chain: C: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
25c4gyxB_
not modelled 9.8 56
PDB header:structural protein, blood clotting
Chain: B: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
26c4gyxA_
not modelled 9.8 56
PDB header:structural protein, blood clotting
Chain: A: PDB Molecule:type iii collagen fragment in a host peptide stabilized by
PDBTitle: the von willebrand factor a3 domain binding region of type iii2 collagen stabilized by the cysteine knot
27c2y5tF_
not modelled 9.6 67
PDB header:immune system
Chain: F: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
28c2wuhD_
not modelled 9.3 67
PDB header:receptor/peptide
Chain: D: PDB Molecule:collagen peptide;
PDBTitle: crystal structure of the ddr2 discoidin domain bound to a2 triple-helical collagen peptide
29c2fulE_
not modelled 8.9 28
PDB header:translation
Chain: E: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of the c-terminal domain of s. cerevisiae eif5
30c4dmtC_
not modelled 8.9 45
PDB header:structural protein
Chain: C: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
31c4dmtB_
not modelled 8.9 45
PDB header:structural protein
Chain: B: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
32c4dmtA_
not modelled 8.9 45
PDB header:structural protein
Chain: A: PDB Molecule:collagen iii derived peptide;
PDBTitle: crystal structure of a vwf binding collagen iii derived triple helical2 peptide
33c2f6aJ_
not modelled 8.8 57
PDB header:cell adhesion/structural protein
Chain: J: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
34c2wuhC_
not modelled 8.8 67
PDB header:receptor/peptide
Chain: C: PDB Molecule:collagen peptide;
PDBTitle: crystal structure of the ddr2 discoidin domain bound to a2 triple-helical collagen peptide
35c2wuhB_
not modelled 8.8 67
PDB header:receptor/peptide
Chain: B: PDB Molecule:collagen peptide;
PDBTitle: crystal structure of the ddr2 discoidin domain bound to a2 triple-helical collagen peptide
36c4auoE_
not modelled 8.8 67
PDB header:hydrolase/peptide
Chain: E: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
37c4auoH_
not modelled 8.8 67
PDB header:hydrolase/peptide
Chain: H: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
38c2f6aI_
not modelled 8.2 57
PDB header:cell adhesion/structural protein
Chain: I: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
39c2f6aE_
not modelled 8.2 57
PDB header:cell adhesion/structural protein
Chain: E: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
40c2f6aF_
not modelled 8.2 57
PDB header:cell adhesion/structural protein
Chain: F: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
41c2f6aH_
not modelled 8.2 57
PDB header:cell adhesion/structural protein
Chain: H: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
42c2f6aG_
not modelled 8.2 57
PDB header:cell adhesion/structural protein
Chain: G: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
43c6a0aA_
not modelled 8.2 50
PDB header:structural protein
Chain: A: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
44c3kziE_
not modelled 8.1 44
PDB header:electron transport
Chain: E: PDB Molecule:cytochrome b559 subunit alpha;
PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii
45c2drxB_
not modelled 8.0 67
PDB header:structural protein
Chain: B: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-(log)2-(pog)4
46c2drxA_
not modelled 7.9 67
PDB header:structural protein
Chain: A: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-(log)2-(pog)4
47c2mqsD_
not modelled 7.6 67
PDB header:hydrolase
Chain: D: PDB Molecule:thp_t_chain;
PDBTitle: transient collagen triple helix binding to a key metalloproteinase in2 invasion and development: spin labels to structure
48c6a0cB_
not modelled 7.6 50
PDB header:structural protein
Chain: B: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
49c2v53B_
not modelled 7.5 67
PDB header:cell adhesion
Chain: B: PDB Molecule:collagen alpha-1(iii) chain;
PDBTitle: crystal structure of a sparc-collagen complex
50c2v53C_
not modelled 7.5 67
PDB header:cell adhesion
Chain: C: PDB Molecule:collagen alpha-1(iii) chain;
PDBTitle: crystal structure of a sparc-collagen complex
51c2v53D_
not modelled 7.5 67
PDB header:cell adhesion
Chain: D: PDB Molecule:collagen alpha-1(iii) chain;
PDBTitle: crystal structure of a sparc-collagen complex
52c2drxC_
not modelled 7.4 67
PDB header:structural protein
Chain: C: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-(log)2-(pog)4
53c4auoF_
not modelled 7.4 67
PDB header:hydrolase/peptide
Chain: F: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
54c4auoD_
not modelled 7.4 67
PDB header:hydrolase/peptide
Chain: D: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
55c4auoG_
not modelled 7.4 67
PDB header:hydrolase/peptide
Chain: G: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
56c2drtB_
not modelled 7.4 67
PDB header:structural protein
Chain: B: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-log-(pog)5
57c2drtA_
not modelled 7.4 67
PDB header:structural protein
Chain: A: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-log-(pog)5
58c1qsuC_
not modelled 7.3 67
PDB header:structural protein
Chain: C: PDB Molecule:protein ((pro-hyp-gly)4- glu-lys-gly(pro-hyp-gly)5);
PDBTitle: crystal structure of the triple-helical collagen-like peptide, (pro-2 hyp-gly)4-glu-lys-gly(pro-hyp-gly)5
59c2drtC_
not modelled 7.3 67
PDB header:structural protein
Chain: C: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-log-(pog)5
60c6a0aB_
not modelled 7.2 67
PDB header:structural protein
Chain: B: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
61c6a0aC_
not modelled 7.2 67
PDB header:structural protein
Chain: C: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
62c3jcue_
not modelled 7.2 33
PDB header:membrane protein
Chain: E: PDB Molecule:cytochrome b559 subunit alpha;
PDBTitle: cryo-em structure of spinach psii-lhcii supercomplex at 3.2 angstrom2 resolution
63c1cagC_
not modelled 7.2 67
PDB header:collagen
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal and molecular structure of a collagen-like peptide2 at 1.9 angstrom resolution
64c1cagA_
not modelled 7.2 67
PDB header:collagen
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal and molecular structure of a collagen-like peptide2 at 1.9 angstrom resolution
65c3ponB_
not modelled 7.0 36
PDB header:unknown function
Chain: B: PDB Molecule:mbl collagen-like peptide;
PDBTitle: crystal structure of mbl collagen-like peptide
66c3pobC_
not modelled 7.0 36
PDB header:hydrolase
Chain: C: PDB Molecule:mbl collagen-like peptide;
PDBTitle: crystal structure of masp-1 cub2 domain in complex with the collagen-2 like domain of mbl
67c3pobB_
not modelled 7.0 36
PDB header:hydrolase
Chain: B: PDB Molecule:mbl collagen-like peptide;
PDBTitle: crystal structure of masp-1 cub2 domain in complex with the collagen-2 like domain of mbl
68c3ponA_
not modelled 7.0 36
PDB header:unknown function
Chain: A: PDB Molecule:mbl collagen-like peptide;
PDBTitle: crystal structure of mbl collagen-like peptide
69c3pobD_
not modelled 7.0 36
PDB header:hydrolase
Chain: D: PDB Molecule:mbl collagen-like peptide;
PDBTitle: crystal structure of masp-1 cub2 domain in complex with the collagen-2 like domain of mbl
70d2axte1
not modelled 6.9 44
Fold:Single transmembrane helix
Superfamily:Cytochrome b559 subunits
Family:Cytochrome b559 subunits
71c6a0cC_
not modelled 6.7 67
PDB header:structural protein
Chain: C: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
72c6a0cA_
not modelled 6.7 67
PDB header:structural protein
Chain: A: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
73c1cagB_
not modelled 6.7 67
PDB header:collagen
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal and molecular structure of a collagen-like peptide2 at 1.9 angstrom resolution
74c1cgdB_
not modelled 6.7 67
PDB header:collagen
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: hydration structure of a collagen peptide
75c1cgdC_
not modelled 6.7 67
PDB header:collagen
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: hydration structure of a collagen peptide
76c1cgdA_
not modelled 6.7 67
PDB header:collagen
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: hydration structure of a collagen peptide
77d1vlfn1
not modelled 6.6 40
Fold:Prealbumin-like
Superfamily:Cna protein B-type domain
Family:Cna protein B-type domain
78c1qsuA_
not modelled 6.5 67
PDB header:structural protein
Chain: A: PDB Molecule:protein ((pro-hyp-gly)4- glu-lys-gly(pro-hyp-gly)5);
PDBTitle: crystal structure of the triple-helical collagen-like peptide, (pro-2 hyp-gly)4-glu-lys-gly(pro-hyp-gly)5
79c1qsuB_
not modelled 6.5 67
PDB header:structural protein
Chain: B: PDB Molecule:protein ((pro-hyp-gly)4- glu-lys-gly(pro-hyp-gly)5);
PDBTitle: crystal structure of the triple-helical collagen-like peptide, (pro-2 hyp-gly)4-glu-lys-gly(pro-hyp-gly)5
80c6hg7A_
not modelled 6.4 67
PDB header:structural protein
Chain: A: PDB Molecule:collagen alpha-1(ii) chain;
PDBTitle: crystal structure of a collagen ii fragment containing the binding2 site of pedf and comp, (pog)4-lkg hrg ftg lqg-pog(4)
81c6hg7C_
not modelled 6.4 67
PDB header:structural protein
Chain: C: PDB Molecule:collagen alpha-1(ii) chain;
PDBTitle: crystal structure of a collagen ii fragment containing the binding2 site of pedf and comp, (pog)4-lkg hrg ftg lqg-pog(4)
82c6hg7B_
not modelled 6.4 67
PDB header:structural protein
Chain: B: PDB Molecule:collagen alpha-1(ii) chain;
PDBTitle: crystal structure of a collagen ii fragment containing the binding2 site of pedf and comp, (pog)4-lkg hrg ftg lqg-pog(4)
83c2mqsB_
not modelled 6.4 67
PDB header:hydrolase
Chain: B: PDB Molecule:thp_l_and_m_chain;
PDBTitle: transient collagen triple helix binding to a key metalloproteinase in2 invasion and development: spin labels to structure
84c2mqsC_
not modelled 6.4 67
PDB header:hydrolase
Chain: C: PDB Molecule:thp_l_and_m_chain;
PDBTitle: transient collagen triple helix binding to a key metalloproteinase in2 invasion and development: spin labels to structure
85c3b2cB_
not modelled 6.3 67
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of the collagen triple helix model [{pro-hyp(r)-2 gly}4-{hyp(s)-pro-gly}2-{pro-hyp(r)-gly}4]3
86c1ei8F_
not modelled 6.3 67
PDB header:contractile protein
Chain: F: PDB Molecule:collagen-like peptide (pro-hyp-gly)4-pg-(pro-hyp-
PDBTitle: structural consequences of a discontinuity in the repeating2 tripeptide sequence of a collagen-like triple-helical3 peptide
87c3b2cC_
not modelled 6.3 67
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of the collagen triple helix model [{pro-hyp(r)-2 gly}4-{hyp(s)-pro-gly}2-{pro-hyp(r)-gly}4]3
88c3b2cF_
not modelled 6.3 67
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of the collagen triple helix model [{pro-hyp(r)-2 gly}4-{hyp(s)-pro-gly}2-{pro-hyp(r)-gly}4]3
89c3b2cI_
not modelled 6.3 67
PDB header:structural protein
Chain: I: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of the collagen triple helix model [{pro-hyp(r)-2 gly}4-{hyp(s)-pro-gly}2-{pro-hyp(r)-gly}4]3
90c1ei8B_
not modelled 6.3 67
PDB header:contractile protein
Chain: B: PDB Molecule:collagen-like peptide (pro-hyp-gly)4-pg-(pro-hyp-
PDBTitle: structural consequences of a discontinuity in the repeating2 tripeptide sequence of a collagen-like triple-helical3 peptide
91c1ei8A_
not modelled 6.3 67
PDB header:contractile protein
Chain: A: PDB Molecule:collagen-like peptide (pro-hyp-gly)4-pg-(pro-hyp-
PDBTitle: structural consequences of a discontinuity in the repeating2 tripeptide sequence of a collagen-like triple-helical3 peptide
92c3b2cG_
not modelled 6.3 67
PDB header:structural protein
Chain: G: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of the collagen triple helix model [{pro-hyp(r)-2 gly}4-{hyp(s)-pro-gly}2-{pro-hyp(r)-gly}4]3
93c1ei8E_
not modelled 6.3 67
PDB header:contractile protein
Chain: E: PDB Molecule:collagen-like peptide (pro-hyp-gly)4-pg-(pro-hyp-
PDBTitle: structural consequences of a discontinuity in the repeating2 tripeptide sequence of a collagen-like triple-helical3 peptide
94c1ei8D_
not modelled 6.3 67
PDB header:contractile protein
Chain: D: PDB Molecule:collagen-like peptide (pro-hyp-gly)4-pg-(pro-hyp-
PDBTitle: structural consequences of a discontinuity in the repeating2 tripeptide sequence of a collagen-like triple-helical3 peptide
95c3b2cE_
not modelled 6.3 67
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of the collagen triple helix model [{pro-hyp(r)-2 gly}4-{hyp(s)-pro-gly}2-{pro-hyp(r)-gly}4]3
96c3b2cD_
not modelled 6.3 67
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of the collagen triple helix model [{pro-hyp(r)-2 gly}4-{hyp(s)-pro-gly}2-{pro-hyp(r)-gly}4]3
97c3b2cA_
not modelled 6.3 67
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of the collagen triple helix model [{pro-hyp(r)-2 gly}4-{hyp(s)-pro-gly}2-{pro-hyp(r)-gly}4]3
98c3b2cH_
not modelled 6.3 67
PDB header:structural protein
Chain: H: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of the collagen triple helix model [{pro-hyp(r)-2 gly}4-{hyp(s)-pro-gly}2-{pro-hyp(r)-gly}4]3
99c2klwC_
not modelled 6.3 67
PDB header:de novo protein
Chain: C: PDB Molecule:(pog)10;
PDBTitle: solution structure of an abc collagen heterotrimer reveals a2 single-register helix stabilized by electrostatic3 interactions

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