Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3161c_(-)_3529987_3531135
DateThu Aug 8 16:20:35 BST 2019
Unique Job IDeb0043166c8a3556
SequenceMLSTDNRAEL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:76.142 Y:55.864 Z:57.135
Model (left) based on template c3n0qA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative aromatic-ring hydroxylating dioxygenase;
PDBTitle: crystal structure of a putative aromatic-ring hydroxylating2 dioxygenase (tm1040_3219) from silicibacter sp. tm1040 at 1.80 a3 resolution
Confidence and coverage
Confidence:100.0% Coverage: 94%
360 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3n0qA_



100.0 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative aromatic-ring hydroxylating dioxygenase;
PDBTitle: crystal structure of a putative aromatic-ring hydroxylating2 dioxygenase (tm1040_3219) from silicibacter sp. tm1040 at 1.80 a3 resolution
2c3vcaA_



100.0 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:ring-hydroxylating dioxygenase;
PDBTitle: quaternary ammonium oxidative demethylation: x-ray crystallographic,2 resonance raman and uv-visible spectroscopic analysis of a rieske-3 type demethylase
3c2b1xE_



100.0 23
PDB header:oxidoreductase
Chain: E: PDB Molecule:naphthalene dioxygenase large subunit;
PDBTitle: crystal structure of naphthalene 1,2-dioxygenase from rhodococcus sp.
4c1uljA_



100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:biphenyl dioxygenase large subunit;
PDBTitle: biphenyl dioxygenase (bpha1a2) in complex with the substrate
5c1wqlA_



100.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:iron-sulfur protein large subunit of cumene dioxygenase;
PDBTitle: cumene dioxygenase (cuma1a2) from pseudomonas fluorescens ip01
6c2hmnA_



100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:naphthalene 1,2-dioxygenase alpha subunit;
PDBTitle: crystal structure of the naphthalene 1,2-dioxygenase f352v2 mutant bound to anthracene.
7c2gbxE_



100.0 21
PDB header:oxidoreductase
Chain: E: PDB Molecule:biphenyl 2,3-dioxygenase alpha subunit;
PDBTitle: crystal structure of biphenyl 2,3-dioxygenase from sphingomonas2 yanoikuyae b1 bound to biphenyl
8c3gteB_



100.0 14
PDB header:electron transport, oxidoreductase
Chain: B: PDB Molecule:ddmc;
PDBTitle: crystal structure of dicamba monooxygenase with non-heme iron
9c3gkqB_



100.0 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:terminal oxygenase component of carbazole 1,9a-dioxygenase;
PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from novosphingobium2 sp. ka1
10c2zylA_



100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:possible oxidoreductase;
PDBTitle: crystal structure of 3-ketosteroid-9-alpha-hydroxylase2 (ksha) from m. tuberculosis
11c3gcfC_



100.0 18
PDB header:oxidoreductase
Chain: C: PDB Molecule:terminal oxygenase component of carbazole 1,9a-
PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from2 nocardioides aromaticivorans ic177
12c4qdfA_



100.0 14
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: A: PDB Molecule:3-ketosteroid 9alpha-hydroxylase oxygenase;
PDBTitle: crystal structure of apo ksha5 and ksha1 in complex with 1,4-30q-coa2 from r. rhodochrous
13c4qdfB_



100.0 19
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: B: PDB Molecule:3-ketosteroid 9alpha-hydroxylase oxygenase;
PDBTitle: crystal structure of apo ksha5 and ksha1 in complex with 1,4-30q-coa2 from r. rhodochrous
14c2de7B_



100.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:terminal oxygenase component of carbazole;
PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase
15c1z01D_



100.0 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase
PDBTitle: 2-oxoquinoline 8-monooxygenase component: active site modulation by2 rieske-[2fe-2s] center oxidation/reduction
16d2b1xa1



100.0 30
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
17d1wqla1



100.0 32
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
18d1ulia1



100.0 37
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
19d2bmoa1



100.0 28
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
20d1o7na1



100.0 30
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
21d1z01a1



not modelled 100.0 19
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
22d2de6a1



not modelled 100.0 25
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
23d2bmoa2



not modelled 99.9 15
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
24c3d89A_



not modelled 99.9 14
PDB header:electron transport
Chain: A: PDB Molecule:rieske domain-containing protein;
PDBTitle: crystal structure of a soluble rieske ferredoxin from mus musculus
25d1wqla2



not modelled 99.9 11
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
26d2b1xa2



not modelled 99.9 21
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
27d1ulia2



not modelled 99.9 10
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
28d1o7na2



not modelled 99.8 18
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
29d1vm9a_



not modelled 99.8 21
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
30c2de7E_



not modelled 99.8 22
PDB header:oxidoreductase
Chain: E: PDB Molecule:ferredoxin component of carbazole;
PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase
31c4aivA_



not modelled 99.8 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable nitrite reductase [nad(p)h] small subunit nird;
PDBTitle: crystal structure of putative nadh-dependent nitrite reductase small2 subunit from mycobacterium tuberculosis
32d2jzaa1



not modelled 99.8 19
Fold:ISP domain
Superfamily:ISP domain
Family:NirD-like
33c3dqyA_



not modelled 99.8 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:toluene 1,2-dioxygenase system ferredoxin
PDBTitle: crystal structure of toluene 2,3-dioxygenase ferredoxin
34d1fqta_



not modelled 99.8 23
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
35d3c0da1



not modelled 99.8 14
Fold:ISP domain
Superfamily:ISP domain
Family:NirD-like
36c3gceA_



not modelled 99.8 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferredoxin component of carbazole 1,9a-
PDBTitle: ferredoxin of carbazole 1,9a-dioxygenase from nocardioides2 aromaticivorans ic177
37c2qpzA_



not modelled 99.8 24
PDB header:metal binding protein
Chain: A: PDB Molecule:naphthalene 1,2-dioxygenase system ferredoxin
PDBTitle: naphthalene 1,2-dioxygenase rieske ferredoxin
38d2jo6a1



not modelled 99.8 17
Fold:ISP domain
Superfamily:ISP domain
Family:NirD-like
39c2i7fB_



not modelled 99.8 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:ferredoxin component of dioxygenase;
PDBTitle: sphingomonas yanoikuyae b1 ferredoxin
40c5cxmC_



not modelled 99.7 20
PDB header:metal binding protein
Chain: C: PDB Molecule:cytochrome b6/f complex iron-sulfur subunit;
PDBTitle: crystal structure of the cyanobacterial plasma membrane rieske protein2 petc3 from synechocystis pcc 6803
41d1rfsa_



not modelled 99.6 22
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
42d1q90c_



not modelled 99.5 21
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
43d3cx5e1



not modelled 99.5 30
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
44c4aayH_



not modelled 99.5 21
PDB header:oxidoreductase
Chain: H: PDB Molecule:arob;
PDBTitle: crystal structure of the arsenite oxidase protein complex2 from rhizobium species strain nt-26
45d1g8kb_



not modelled 99.4 16
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
46d2e74d1



not modelled 99.4 20
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
47d1riea_



not modelled 99.4 24
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
48c2nvgA_



not modelled 99.3 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: soluble domain of rieske iron sulfur protein.
49d1z01a2



not modelled 99.2 15
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
50d1nyka_



not modelled 99.1 21
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
51c2e76D_



not modelled 99.1 13
PDB header:photosynthesis
Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit;
PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus
52c2fyuE_



not modelled 99.0 25
PDB header:oxidoreductase
Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit,
PDBTitle: crystal structure of bovine heart mitochondrial bc1 with jg1442 inhibitor
53c2fynO_



not modelled 98.9 24
PDB header:oxidoreductase
Chain: O: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur
PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex
54d2de6a2



not modelled 98.8 14
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
55c1p84E_



not modelled 98.7 30
PDB header:oxidoreductase
Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: hdbt inhibited yeast cytochrome bc1 complex
56c6hwhB_



not modelled 97.8 25
PDB header:electron transport
Chain: B: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
57d1jm1a_



not modelled 97.7 25
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
58c6fo2R_



not modelled 96.1 24
PDB header:membrane protein
Chain: R: PDB Molecule:cytochrome b-c1 complex subunit rieske, mitochondrial;
PDBTitle: cryoem structure of bovine cytochrome bc1 with no ligand bound
59c5x2dA_



not modelled 68.4 6
PDB header:cell adhesion
Chain: A: PDB Molecule:tegumental protein 20.8 kda;
PDBTitle: crystal structure of dlc like domain of cstal3 (83-177aa)
60d1pwka_



not modelled 62.2 14
Fold:DLC
Superfamily:DLC
Family:DLC
61c5fx0A_



not modelled 44.6 9
PDB header:cell adhesion
Chain: A: PDB Molecule:calcium binding protein;
PDBTitle: fasciola hepatica calcium binding protein fhcabp2: structure of the2 dynein light chain-like domain. p6422 native.
62c5e7tI_



not modelled 37.4 35
PDB header:viral protein
Chain: I: PDB Molecule:major structural protein 1;
PDBTitle: structure of the tripod (bppuct-a-l) from the baseplate of2 bacteriophage tuc2009
63c3nwiC_



not modelled 37.0 14
PDB header:transport protein
Chain: C: PDB Molecule:zinc transport protein zntb;
PDBTitle: the soluble domain structure of the zntb zn2+ efflux system
64c2w3nA_



not modelled 35.7 26
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase 2;
PDBTitle: structure and inhibition of the co2-sensing carbonic anhydrase can22 from the pathogenic fungus cryptococcus neoformans
65c4ct0B_



not modelled 32.3 13
PDB header:circadian clock protein
Chain: B: PDB Molecule:period circadian protein homolog 2;
PDBTitle: crystal structure of mouse cryptochrome1 in complex with period2
66c3fcgB_



not modelled 30.1 14
PDB header:membrane protein, protein transport
Chain: B: PDB Molecule:f1 capsule-anchoring protein;
PDBTitle: crystal structure analysis of the middle domain of the2 caf1a usher
67c4psiA_



not modelled 29.7 12
PDB header:protein binding
Chain: A: PDB Molecule:pih1 domain-containing protein 1;
PDBTitle: pih1d1/phospho-tel2 complex
68c5ztpB_



not modelled 29.7 29
PDB header:lyase
Chain: B: PDB Molecule:carbonic anhydrase;
PDBTitle: carbonic anhydrase from glaciozyma antarctica
69c3kv0A_



not modelled 28.8 29
PDB header:transport protein
Chain: A: PDB Molecule:het-c2;
PDBTitle: crystal structure of het-c2: a fungal glycolipid transfer protein2 (gltp)
70c3tenD_



not modelled 28.2 33
PDB header:hydrolase
Chain: D: PDB Molecule:cs2 hydrolase;
PDBTitle: holo form of carbon disulfide hydrolase
71c4ds1C_



not modelled 28.2 9
PDB header:structural protein/transport protein
Chain: C: PDB Molecule:dynein light chain 1, cytoplasmic;
PDBTitle: the structure of a yeast dyn2-nup159 complex and the molecular basis2 for the dynein light chain - nuclear pore interaction
72c1ddzA_



not modelled 27.9 43
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase;
PDBTitle: x-ray structure of a beta-carbonic anhydrase from the red2 alga, porphyridium purpureum r-1
73c2vpyB_



not modelled 27.2 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:nrfc protein;
PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp)
74c3lasA_



not modelled 27.0 29
PDB header:lyase
Chain: A: PDB Molecule:putative carbonic anhydrase;
PDBTitle: crystal structure of carbonic anhydrase from streptococcus mutans to2 1.4 angstrom resolution
75c4qiwP_



not modelled 26.1 21
PDB header:transcription
Chain: P: PDB Molecule:dna-directed rna polymerase subunit p;
PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis
76d1en2a2



not modelled 26.1 30
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Plant lectins/antimicrobial peptides
Family:Hevein-like agglutinin (lectin) domain
77c2z0rA_



not modelled 25.7 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein ttha0547;
PDBTitle: crystal structure of hypothetical protein ttha0547
78c4rxyA_



not modelled 25.5 27
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase;
PDBTitle: crystal structure of the beta carbonic anhydrase psca3 isolated from2 pseudomonas aeruginosa
79c3vrkA_



not modelled 25.3 29
PDB header:hydrolase
Chain: A: PDB Molecule:carbonyl sulfide hydrolase;
PDBTitle: crystal structutre of thiobacillus thioparus thi115 carbonyl sulfide2 hydrolase / thiocyanate complex
80d1ehda2



not modelled 25.2 30
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Plant lectins/antimicrobial peptides
Family:Hevein-like agglutinin (lectin) domain
81d1ddza2



not modelled 24.8 50
Fold:Resolvase-like
Superfamily:beta-carbonic anhydrase, cab
Family:beta-carbonic anhydrase, cab
82c4v36B_



not modelled 24.6 25
PDB header:transferase
Chain: B: PDB Molecule:lysyl-trna-dependent l-ysyl-phosphatidylgycerol synthase;
PDBTitle: the structure of l-pgs from bacillus licheniformis
83c1ylkA_



not modelled 22.6 14
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein rv1284/mt1322;
PDBTitle: crystal structure of rv1284 from mycobacterium tuberculosis in complex2 with thiocyanate
84c2c3yA_



not modelled 20.9 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase;
PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus
85d1nfga1



not modelled 20.8 26
Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:Hydantoinase (dihydropyrimidinase)
86d1uhva1



not modelled 20.8 28
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
87d3e2ba1



not modelled 20.6 9
Fold:DLC
Superfamily:DLC
Family:DLC
88d1ddza1



not modelled 20.3 43
Fold:Resolvase-like
Superfamily:beta-carbonic anhydrase, cab
Family:beta-carbonic anhydrase, cab
89d1ei5a2



not modelled 20.0 24
Fold:Streptavidin-like
Superfamily:D-aminopeptidase, middle and C-terminal domains
Family:D-aminopeptidase, middle and C-terminal domains
90d1cmia_



not modelled 19.7 9
Fold:DLC
Superfamily:DLC
Family:DLC
91c4k8nF_



not modelled 19.5 60
PDB header:lipid transport
Chain: F: PDB Molecule:glycolipid transfer protein domain-containing protein 1;
PDBTitle: crystal structure of human ceramide-1-phosphate transfer protein2 (cptp) in complex with 18:1 ceramide-1-phosphate (18:1-c1p)
92d3orca_



not modelled 19.1 29
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
93c5mu4A_



not modelled 18.8 12
PDB header:viral protein
Chain: A: PDB Molecule:tail tubular protein a;
PDBTitle: tail tubular protein a of klebsiella pneumoniae bacteriophage kp32
94c3j20R_



not modelled 18.8 40
PDB header:ribosome
Chain: R: PDB Molecule:30s ribosomal protein s17p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
95c5kdiA_



not modelled 18.7 60
PDB header:lipid transport
Chain: A: PDB Molecule:pleckstrin homology domain-containing family a member 8;
PDBTitle: how fapp2 selects simple glycosphingolipids using the gltp-fold
96d1swxa_



not modelled 18.7 60
Fold:Glycolipid transfer protein, GLTP
Superfamily:Glycolipid transfer protein, GLTP
Family:Glycolipid transfer protein, GLTP
97c6gwuB_



not modelled 18.5 21
PDB header:lyase
Chain: B: PDB Molecule:carbonic anhydrase;
PDBTitle: carbonic anhydrase cance103p from candida albicans
98c3eywA_



not modelled 18.5 16
PDB header:transport protein
Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux
PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff
99c3eyxB_



not modelled 18.3 29
PDB header:lyase
Chain: B: PDB Molecule:carbonic anhydrase;
PDBTitle: crystal structure of carbonic anhydrase nce103 from2 saccharomyces cerevisiae

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