Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3162c_(-)_3531205_3531642
DateThu Aug 8 16:20:35 BST 2019
Unique Job ID1bf8bef6e44c6c74
SequenceMTSFAHPGTR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:48.672 Y:12.443 Z:15.177
Model (left) based on template c2l5bA_
Top template information
PDB header:apoptosis
Chain: A: PDB Molecule:activator of apoptosis harakiri;
PDBTitle: solution structure of the transmembrane domain of bcl-2 member2 harakiri in micelles
Confidence and coverage
Confidence: 31.7% Coverage: 19%
27 residues ( 19% of your sequence) have been modelled with 31.7% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2l5bA_



31.7 41
PDB header:apoptosis
Chain: A: PDB Molecule:activator of apoptosis harakiri;
PDBTitle: solution structure of the transmembrane domain of bcl-2 member2 harakiri in micelles
2c3kysB_



8.3 50
PDB header:transcription/protein binding
Chain: B: PDB Molecule:65 kda yes-associated protein;
PDBTitle: crystal structure of human yap and tead complex
3c6cn0B_



8.2 30
PDB header:transferase
Chain: B: PDB Molecule:16s rrna (guanine(1405)-n(7))-methyltransferase;
PDBTitle: 2.95 angstrom crystal structure of 16s rrna methylase from proteus2 mirabilis
4c2loqA_



8.1 42
PDB header:membrane protein
Chain: A: PDB Molecule:interferon alpha-inducible protein 27-like protein 1;
PDBTitle: backbone structure of human membrane protein fam14b (interferon alpha-2 inducible protein 27-like protein 1)
5d1sdia_



6.6 50
Fold:YcfC-like
Superfamily:YcfC-like
Family:YcfC-like
6d2e74f1



5.8 63
Fold:Single transmembrane helix
Superfamily:PetM subunit of the cytochrome b6f complex
Family:PetM subunit of the cytochrome b6f complex
7d3eipa_



5.7 33
Fold:FKBP-like
Superfamily:Colicin E3 immunity protein
Family:Colicin E3 immunity protein

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below