Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3179_(-)_3547615_3548904
DateThu Aug 8 16:20:36 BST 2019
Unique Job IDb640e234e69198b6
SequenceVVHDEAGHEL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:62.121 Y:65.400 Z:42.838
Model (left) based on template c2fnaA_
Top template information
PDB header:atp-binding protein
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus2 solfataricus p2 at 2.00 a resolution
Confidence and coverage
Confidence: 99.7% Coverage: 63%
269 residues ( 63% of your sequence) have been modelled with 99.7% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2fnaA_
99.7 17
PDB header:atp-binding protein
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus2 solfataricus p2 at 2.00 a resolution
2c2qenA_
99.5 18
PDB header:unknown function
Chain: A: PDB Molecule:walker-type atpase;
PDBTitle: the walker-type atpase paby2304 of pyrococcus abyssi
3c3pfiB_
99.4 15
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
4c1in8A_
99.3 17
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction dna helicase ruvb;
PDBTitle: thermotoga maritima ruvb t158v
5c6blbA_
99.3 18
PDB header:hydrolase
Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 1.88 angstrom resolution crystal structure holliday junction atp-2 dependent dna helicase (ruvb) from pseudomonas aeruginosa in complex3 with adp
6d2fnaa2
99.2 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
7c3pvsA_
99.1 21
PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
8c1ojlD_
99.1 18
PDB header:response regulator
Chain: D: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the mechanism for2 the conformational switch necessary for sigma54 binding
9c2v1uA_
99.0 14
PDB header:replication
Chain: A: PDB Molecule:cell division control protein 6 homolog;
PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna
10c4b4tI_
99.0 17
PDB header:hydrolase
Chain: I: PDB Molecule:26s protease regulatory subunit 4 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
11c4xgcA_
98.9 9
PDB header:dna binding protein
Chain: A: PDB Molecule:origin recognition complex subunit 1;
PDBTitle: crystal structure of the eukaryotic origin recognition complex
12c2qbyB_
98.9 11
PDB header:replication/dna
Chain: B: PDB Molecule:cell division control protein 6 homolog 3;
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
13c5g4gF_
98.9 23
PDB header:hydrolase
Chain: F: PDB Molecule:vcp-like atpase;
PDBTitle: structure of the atpgs-bound vat complex
14c5m7nA_
98.9 15
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen assimilation regulatory protein;
PDBTitle: crystal structure of ntrx from brucella abortus in complex with atp2 processed with the crystaldirect automated mounting and cryo-cooling3 technology
15c3u5zM_
98.9 8
PDB header:dna binding protein/dna
Chain: M: PDB Molecule:dna polymerase accessory protein 44;
PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog
16c3hu2C_
98.8 17
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs
17c6az0A_
98.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:mitochondrial inner membrane i-aaa protease supercomplex
PDBTitle: mitochondrial atpase protease yme1
18c1s3sA_
98.8 17
PDB header:protein binding
Chain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter
PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
19c6azyA_
98.8 15
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein hsp104;
PDBTitle: crystal structure of hsp104 r328m/r757m mutant from calcarisporiella2 thermophila
20c3cf2B_
98.8 25
PDB header:transport protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/amp-pnp
21c4z8xC_
not modelled 98.8 19
PDB header:hydrolase
Chain: C: PDB Molecule:atp-dependent zinc metalloprotease ftsh;
PDBTitle: truncated ftsh from a. aeolicus
22c1fnnB_
not modelled 98.8 14
PDB header:cell cycle
Chain: B: PDB Molecule:cell division control protein 6;
PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum
23c5e7pA_
not modelled 98.8 24
PDB header:hydrolase
Chain: A: PDB Molecule:cell division control protein cdc48;
PDBTitle: crystal structure of msmeg_0858 (uniprot a0qqs4), a aaa atpase.
24c6epdM_
not modelled 98.8 19
PDB header:hydrolase
Chain: M: PDB Molecule:26s proteasome regulatory subunit 6a;
PDBTitle: substrate processing state 26s proteasome (sps1)
25c6nyyC_
not modelled 98.8 19
PDB header:translocase
Chain: C: PDB Molecule:afg3-like protein 2;
PDBTitle: human m-aaa protease afg3l2, substrate-bound
26c1sxjA_
not modelled 98.8 13
PDB header:replication
Chain: A: PDB Molecule:activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
27c4b4tL_
not modelled 98.8 22
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
28c5mpaL_
not modelled 98.8 23
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: 26s proteasome in presence of atp (s2)
29c2dhrC_
not modelled 98.8 23
PDB header:hydrolase
Chain: C: PDB Molecule:ftsh;
PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l)
30d1e32a2
not modelled 98.8 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
31c5ifwB_
not modelled 98.8 18
PDB header:signaling protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: quantitative interaction mapping reveals an extended ubiquitin2 regulatory domain in aspl that disrupts functional p97 hexamers and3 induces cell death
32c6b5cA_
not modelled 98.7 14
PDB header:cell cycle
Chain: A: PDB Molecule:katanin p60 atpase-containing subunit a-like 1;
PDBTitle: structural basis for katanin self-assembly
33c1r6bX_
not modelled 98.7 22
PDB header:hydrolase
Chain: X: PDB Molecule:clpa protein;
PDBTitle: high resolution crystal structure of clpa
34c5uj7B_
not modelled 98.7 12
PDB header:dna binding protein
Chain: B: PDB Molecule:origin recognition complex subunit 1;
PDBTitle: structure of the active form of human origin recognition complex2 atpase motor module, complex subunits 1, 4, 5
35c6mfvC_
not modelled 98.7 18
PDB header:signaling protein
Chain: C: PDB Molecule:tetratricopeptide repeat sensor ph0952;
PDBTitle: crystal structure of the signal transduction atpase with numerous2 domains (stand) protein with a tetratricopeptide repeat sensor ph09523 from pyrococcus horikoshii
36d1in4a2
not modelled 98.7 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
37c3cf1C_
not modelled 98.7 18
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
38c2x8aA_
not modelled 98.7 20
PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear valosin-containing protein-like;
PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain
39c6hecH_
not modelled 98.7 18
PDB header:hydrolase
Chain: H: PDB Molecule:proteasome-activating nucleotidase;
PDBTitle: pan-proteasome in state 4
40c4b4tJ_
not modelled 98.7 19
PDB header:hydrolase
Chain: J: PDB Molecule:26s protease regulatory subunit 8 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
41d2ce7a2
not modelled 98.7 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
42c4ciuA_
not modelled 98.7 16
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein clpb;
PDBTitle: crystal structure of e. coli clpb
43c3zw6B_
not modelled 98.7 12
PDB header:photosynthesis
Chain: B: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1,
PDBTitle: model of hexameric aaa domain arrangement of green-type rubisco2 activase from tobacco.
44c2qz4A_
not modelled 98.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:paraplegin;
PDBTitle: human paraplegin, aaa domain in complex with adp
45c5w0tA_
not modelled 98.7 19
PDB header:hydrolase
Chain: A: PDB Molecule:protein msp1;
PDBTitle: crystal structure of monomeric msp1 from s. cerevisiae
46c2ce7B_
not modelled 98.7 18
PDB header:cell division protein
Chain: B: PDB Molecule:cell division protein ftsh;
PDBTitle: edta treated
47c6epcJ_
not modelled 98.7 22
PDB header:hydrolase
Chain: J: PDB Molecule:26s proteasome regulatory subunit 8;
PDBTitle: ground state 26s proteasome (gs2)
48d1ixza_
not modelled 98.7 19
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
49c4b4tK_
not modelled 98.7 22
PDB header:hydrolase
Chain: K: PDB Molecule:26s protease regulatory subunit 6b homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
50c1qvrB_
not modelled 98.7 19
PDB header:chaperone
Chain: B: PDB Molecule:clpb protein;
PDBTitle: crystal structure analysis of clpb
51c4b4tH_
not modelled 98.7 18
PDB header:hydrolase
Chain: H: PDB Molecule:26s protease regulatory subunit 7 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
52c5wc0D_
not modelled 98.7 14
PDB header:motor protein
Chain: D: PDB Molecule:meiotic spindle formation protein mei-1;
PDBTitle: katanin hexamer in spiral conformation
53c5d4wB_
not modelled 98.7 16
PDB header:chaperone
Chain: B: PDB Molecule:putative heat shock protein;
PDBTitle: crystal structure of hsp104
54c3pxiB_
not modelled 98.7 13
PDB header:protein binding
Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb;
PDBTitle: structure of meca108:clpc
55c2c9oA_
not modelled 98.7 21
PDB header:hydrolase
Chain: A: PDB Molecule:ruvb-like 1;
PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
56c1sxjB_
not modelled 98.7 20
PDB header:replication
Chain: B: PDB Molecule:activator 1 37 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
57c4xgcE_
not modelled 98.6 12
PDB header:dna binding protein
Chain: E: PDB Molecule:origin recognition complex subunit 5;
PDBTitle: crystal structure of the eukaryotic origin recognition complex
58c1jr3E_
not modelled 98.6 19
PDB header:transferase
Chain: E: PDB Molecule:dna polymerase iii, delta' subunit;
PDBTitle: crystal structure of the processivity clamp loader gamma complex of e.2 coli dna polymerase iii
59d1r7ra3
not modelled 98.6 21
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
60c5ubvB_
not modelled 98.6 20
PDB header:hydrolase
Chain: B: PDB Molecule:atpase domain of i-aaa protease;
PDBTitle: atpase domain of i-aaa protease from myceliophthora thermophila
61c1hqcB_
not modelled 98.6 16
PDB header:hydrolase
Chain: B: PDB Molecule:ruvb;
PDBTitle: structure of ruvb from thermus thermophilus hb8
62c4l16A_
not modelled 98.6 15
PDB header:hydrolase
Chain: A: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of figl-1 aaa domain in complex with adp
63c5vy9C_
not modelled 98.6 16
PDB header:chaperone
Chain: C: PDB Molecule:heat shock protein 104;
PDBTitle: s. cerevisiae hsp104:casein complex, middle domain conformation
64c5udb9_
not modelled 98.6 15
PDB header:replication
Chain: 9: PDB Molecule:cell division control protein 6;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
65c5ujmE_
not modelled 98.6 16
PDB header:replication
Chain: E: PDB Molecule:origin recognition complex subunit 5;
PDBTitle: structure of the active form of human origin recognition complex and2 its atpase motor module
66c3vfdA_
not modelled 98.6 17
PDB header:hydrolase
Chain: A: PDB Molecule:spastin;
PDBTitle: human spastin aaa domain
67d1g41a_
not modelled 98.6 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
68c1sxjC_
not modelled 98.6 16
PDB header:replication
Chain: C: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
69c1xxhB_
not modelled 98.6 22
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii subunit gamma;
PDBTitle: atpgs bound e. coli clamp loader complex
70c5uj7C_
not modelled 98.6 24
PDB header:dna binding protein
Chain: C: PDB Molecule:origin recognition complex subunit 4;
PDBTitle: structure of the active form of human origin recognition complex2 atpase motor module, complex subunits 1, 4, 5
71c4ypnA_
not modelled 98.6 19
PDB header:hydrolase
Chain: A: PDB Molecule:lon protease;
PDBTitle: crystal structure of a lona fragment containing the 3-helix bundle and2 the aaa-alpha/beta domain
72c4b4tM_
not modelled 98.6 16
PDB header:hydrolase
Chain: M: PDB Molecule:26s protease regulatory subunit 6a;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
73c3d8bB_
not modelled 98.6 17
PDB header:hydrolase
Chain: B: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp
74c5kzfJ_
not modelled 98.6 16
PDB header:hydrolase
Chain: J: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of near full-length hexameric mycobacterium2 tuberculosis proteasomal atpase mpa in apo form
75d1jbka_
not modelled 98.6 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
76c3b9pA_
not modelled 98.6 16
PDB header:hydrolase
Chain: A: PDB Molecule:cg5977-pa, isoform a;
PDBTitle: spastin
77c5gjqL_
not modelled 98.6 17
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease regulatory subunit 10b;
PDBTitle: structure of the human 26s proteasome bound to usp14-ubal
78c1nsfA_
not modelled 98.6 12
PDB header:protein transport
Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor;
PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf)
79d1qvra2
not modelled 98.6 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
80c6matE_
not modelled 98.6 16
PDB header:ribosomal protein
Chain: E: PDB Molecule:rix7 mutant;
PDBTitle: cryo-em structure of the essential ribosome assembly aaa-atpase rix7
81c5kneD_
not modelled 98.6 16
PDB header:chaperone
Chain: D: PDB Molecule:heat shock protein 104;
PDBTitle: cryoem reconstruction of hsp104 hexamer
82c5kneF_
not modelled 98.6 15
PDB header:chaperone
Chain: F: PDB Molecule:heat shock protein 104;
PDBTitle: cryoem reconstruction of hsp104 hexamer
83c6opcF_
not modelled 98.6 20
PDB header:motor protein
Chain: F: PDB Molecule:cell division control protein 48;
PDBTitle: cdc48 hexamer in a complex with substrate and shp1(ubx domain)
84c2zamA_
not modelled 98.6 17
PDB header:protein transport
Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b;
PDBTitle: crystal structure of mouse skd1/vps4b apo-form
85d1d2na_
not modelled 98.6 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
86c1iy2A_
not modelled 98.6 22
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh;
PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus
87c6em8F_
not modelled 98.6 16
PDB header:chaperone
Chain: F: PDB Molecule:atp-dependent clp protease atp-binding subunit clpc;
PDBTitle: s.aureus clpc resting state, c2 symmetrised
88d1xbta1
not modelled 98.6 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Type II thymidine kinase
89d1r6bx3
not modelled 98.6 22
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
90c5kneA_
not modelled 98.5 13
PDB header:chaperone
Chain: A: PDB Molecule:heat shock protein 104;
PDBTitle: cryoem reconstruction of hsp104 hexamer
91d1um8a_
not modelled 98.5 24
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
92c4lcbA_
not modelled 98.5 16
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein cdvc, vps4;
PDBTitle: structure of vps4 homolog from acidianus hospitalis
93c5oafB_
not modelled 98.5 20
PDB header:gene regulation
Chain: B: PDB Molecule:ruvb-like 2;
PDBTitle: human rvb1/rvb2 heterohexamer in ino80 complex
94c5j1sA_
not modelled 98.5 15
PDB header:hydrolase
Chain: A: PDB Molecule:torsin-1a;
PDBTitle: torsina-lull1 complex, h. sapiens, bound to vhh-bs2
95c1sxjE_
not modelled 98.5 11
PDB header:replication
Chain: E: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
96c2chgB_
not modelled 98.5 18
PDB header:dna-binding protein
Chain: B: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c domains 1 and 2
97c1xwiA_
not modelled 98.5 18
PDB header:protein transport
Chain: A: PDB Molecule:skd1 protein;
PDBTitle: crystal structure of vps4b
98c2chvE_
not modelled 98.5 17
PDB header:dna-binding protein
Chain: E: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c adpnp complex
99c3iz8F_
not modelled 98.5 13
PDB header:apoptosis
Chain: F: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
100c1vt4L_
not modelled 98.5 13
PDB header:apoptosis
Chain: L: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
101c1vt4K_
not modelled 98.5 13
PDB header:apoptosis
Chain: K: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
102c3iz8D_
not modelled 98.5 13
PDB header:apoptosis
Chain: D: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
103c1vt4O_
not modelled 98.5 13
PDB header:apoptosis
Chain: O: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
104c3iz8G_
not modelled 98.5 13
PDB header:apoptosis
Chain: G: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
105c3iz8E_
not modelled 98.5 13
PDB header:apoptosis
Chain: E: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
106c1vt4N_
not modelled 98.5 13
PDB header:apoptosis
Chain: N: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
107c1vt4J_
not modelled 98.5 13
PDB header:apoptosis
Chain: J: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
108c3iz8B_
not modelled 98.5 13
PDB header:apoptosis
Chain: B: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
109c1vt4P_
not modelled 98.5 13
PDB header:apoptosis
Chain: P: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
110c1vt4I_
not modelled 98.5 13
PDB header:apoptosis
Chain: I: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
111c3iz8A_
not modelled 98.5 13
PDB header:apoptosis
Chain: A: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
112c3iz8H_
not modelled 98.5 13
PDB header:apoptosis
Chain: H: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
113c1vt4M_
not modelled 98.5 13
PDB header:apoptosis
Chain: M: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
114c3iz8C_
not modelled 98.5 13
PDB header:apoptosis
Chain: C: PDB Molecule:apaf-1 related killer dark;
PDBTitle: structure of the drosophila apoptosome
115c4xgcD_
not modelled 98.5 23
PDB header:dna binding protein
Chain: D: PDB Molecule:origin recognition complex subunit 4;
PDBTitle: crystal structure of the eukaryotic origin recognition complex
116c6genX_
not modelled 98.5 24
PDB header:nuclear protein
Chain: X: PDB Molecule:ruvb-like protein 1;
PDBTitle: chromatin remodeller-nucleosome complex at 4.5 a resolution.
117d1ofha_
not modelled 98.5 22
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
118d1ny5a2
not modelled 98.5 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
119c5t0gA_
not modelled 98.5 17
PDB header:hydrolase
Chain: A: PDB Molecule:26s protease regulatory subunit 7;
PDBTitle: structural basis for dynamic regulation of the human 26s proteasome
120c3h4mC_
not modelled 98.5 17
PDB header:hydrolase
Chain: C: PDB Molecule:proteasome-activating nucleotidase;
PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite