Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3192_(-)_3559560_3560021
DateThu Aug 8 16:20:38 BST 2019
Unique Job ID575d3451283a2e15
SequenceMIPQPLSQLG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:30.803 Y:45.054 Z:48.659
Model (left) based on template d1lucb_
Top template information
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:Bacterial luciferase (alkanal monooxygenase)
Confidence and coverage
Confidence:100.0% Coverage: 92%
141 residues ( 92% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1lucb_



100.0 13
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:Bacterial luciferase (alkanal monooxygenase)
2c6friD_



100.0 13
PDB header:oxidoreductase
Chain: D: PDB Molecule:alkanal monooxygenase beta chain;
PDBTitle: structure of luxb from photobacterium leiognathi
3c2b81D_



100.0 14
PDB header:oxidoreductase
Chain: D: PDB Molecule:luciferase-like monooxygenase;
PDBTitle: crystal structure of the luciferase-like monooxygenase from bacillus2 cereus
4c3raoB_



100.0 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative luciferase-like monooxygenase;
PDBTitle: crystal structure of the luciferase-like monooxygenase from bacillus2 cereus atcc 10987.
5d1nqka_



100.0 17
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:Ssud-like monoxygenases
6d1luca_



100.0 15
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:Bacterial luciferase (alkanal monooxygenase)
7c2i7gA_



100.0 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:monooxygenase;
PDBTitle: crystal structure of monooxygenase from agrobacterium tumefaciens
8c3sdoB_



100.0 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitrilotriacetate monooxygenase;
PDBTitle: structure of a nitrilotriacetate monooxygenase from burkholderia2 pseudomallei
9d1ezwa_



100.0 15
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:F420 dependent oxidoreductases
10c1z69D_



100.0 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:coenzyme f420-dependent n(5),n(10)-
PDBTitle: crystal structure of methylenetetrahydromethanopterin2 reductase (mer) in complex with coenzyme f420
11c5tlcA_



100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:dibenzothiophene desulfurization enzyme a;
PDBTitle: crystal structure of bdsa from bacillus subtilis wu-s2b
12c5dqpA_



100.0 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:edta monooxygenase;
PDBTitle: edta monooxygenase (emoa) from chelativorans sp. bnc1
13c2wgkA_



100.0 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:3,6-diketocamphane 1,6 monooxygenase;
PDBTitle: type ii baeyer-villiger monooxygenase oxygenating2 constituent of 3,6-diketocamphane 1,6 monooxygenase from3 pseudomonas putida
14c1tvlA_



100.0 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein ytnj;
PDBTitle: structure of ytnj from bacillus subtilis
15d1tvla_



100.0 9
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:Ssud-like monoxygenases
16d1rhca_



100.0 18
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:F420 dependent oxidoreductases
17c5wanA_



100.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyrimidine monooxygenase ruta;
PDBTitle: crystal structure of a flavoenzyme ruta in the pyrimidine catabolic2 pathway
18d1f07a_



100.0 16
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:F420 dependent oxidoreductases
19c3b9nB_



100.0 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:alkane monoxygenase;
PDBTitle: crystal structure of long-chain alkane monooxygenase (lada)
20c3c8nB_



100.0 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:probable f420-dependent glucose-6-phosphate dehydrogenase
PDBTitle: crystal structure of apo-fgd1 from mycobacterium tuberculosis
21c5w4zA_



not modelled 100.0 11
PDB header:flavoprotein
Chain: A: PDB Molecule:riboflavin lyase;
PDBTitle: crystal structure of riboflavin lyase (rcae) with modified fmn and2 substrate riboflavin
22c6ak1B_



not modelled 100.0 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:dimethyl-sulfide monooxygenase;
PDBTitle: crystal structure of dmoa from hyphomicrobium sulfonivorans
23d1nfpa_



not modelled 93.6 15
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:Non-fluorescent flavoprotein (luxF, FP390)
24c5i4rA_



not modelled 40.1 19
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:contact-dependent inhibitor a;
PDBTitle: contact-dependent inhibition system from escherichia coli nc101 -2 ternary cdia/cdii/ef-tu complex (trypsin-modified)
25d1oyaa_



not modelled 39.6 8
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
26c4tmcB_



not modelled 38.8 9
PDB header:flavoprotein
Chain: B: PDB Molecule:old yellow enzyme;
PDBTitle: crystal structure of old yellow enzyme from candida macedoniensis2 aku4588 complexed with p-hydroxybenzaldehyde
27c3fa4D_



not modelled 37.1 18
PDB header:lyase
Chain: D: PDB Molecule:2,3-dimethylmalate lyase;
PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form
28c4ot7A_



not modelled 37.1 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase;
PDBTitle: x-structure of a variant of ncr from zymomonas mobilis
29c3gr7A_



not modelled 36.2 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph dehydrogenase;
PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal crystal form
30c4jicB_



not modelled 35.1 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:gtn reductase;
PDBTitle: glycerol trinitrate reductase nera from agrobacterium radiobacter
31c2yb1A_



not modelled 33.5 16
PDB header:hydrolase
Chain: A: PDB Molecule:amidohydrolase;
PDBTitle: structure of an amidohydrolase from chromobacterium violaceum (efi2 target efi-500202) with bound mn, amp and phosphate.
32d1icpa_



not modelled 32.9 14
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
33c4lsbA_



not modelled 32.6 20
PDB header:lyase
Chain: A: PDB Molecule:lyase/mutase;
PDBTitle: crystal structure of a putative lyase/mutase from burkholderia2 cenocepacia j2315
34c5dxxA_



not modelled 32.5 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:artemisinic aldehyde delta(11(13)) reductase;
PDBTitle: crystal structure of dbr2
35c2gq8A_



not modelled 31.2 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase, fmn-binding;
PDBTitle: structure of sye1, an oye homologue from s. ondeidensis, in complex2 with p-hydroxyacetophenone
36c1zlpA_



not modelled 29.9 23
PDB header:lyase
Chain: A: PDB Molecule:petal death protein;
PDBTitle: petal death protein psr132 with cysteine-linked glutaraldehyde forming2 a thiohemiacetal adduct
37c4a3uB_



not modelled 29.7 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:nadh\:flavin oxidoreductase/nadh oxidase;
PDBTitle: x-structure of the old yellow enzyme homologue from zymomonas mobilis2 (ncr)
38d1vjia_



not modelled 29.5 14
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
39c3ih1A_



not modelled 29.4 27
PDB header:lyase
Chain: A: PDB Molecule:methylisocitrate lyase;
PDBTitle: crystal structure of carboxyvinyl-carboxyphosphonate phosphorylmutase2 from bacillus anthracis
40c2h90A_



not modelled 29.4 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:xenobiotic reductase a;
PDBTitle: xenobiotic reductase a in complex with coumarin
41d1z41a1



not modelled 28.8 25
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
42c2ze3A_



not modelled 28.5 11
PDB header:isomerase
Chain: A: PDB Molecule:dfa0005;
PDBTitle: crystal structure of dfa0005 complexed with alpha-ketoglutarate: a2 novel member of the icl/pepm superfamily from alkali-tolerant3 deinococcus ficus
43d1s2wa_



not modelled 27.1 5
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Phosphoenolpyruvate mutase/Isocitrate lyase-like
44d1djqa1



not modelled 26.5 14
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
45c4df2A_



not modelled 26.4 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph dehydrogenase;
PDBTitle: p. stipitis oye2.6 complexed with p-chlorophenol
46c2vwtA_



not modelled 26.1 15
PDB header:lyase
Chain: A: PDB Molecule:yfau, 2-keto-3-deoxy sugar aldolase;
PDBTitle: crystal structure of yfau, a metal ion dependent class ii2 aldolase from escherichia coli k12 - mg-pyruvate product3 complex
47c4b5nA_



not modelled 25.4 5
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase, fmn-binding;
PDBTitle: crystal structure of oxidized shewanella yellow enzyme 4 (sye4)
48d1vyra_



not modelled 25.3 23
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
49d1gwja_



not modelled 24.5 20
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
50d1q45a_



not modelled 24.5 15
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
51d1oy0a_



not modelled 23.9 18
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Ketopantoate hydroxymethyltransferase PanB
52d1ujqa_



not modelled 23.7 21
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Phosphoenolpyruvate mutase/Isocitrate lyase-like
53c4qnwA_



not modelled 23.5 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:chanoclavine-i aldehyde reductase;
PDBTitle: crystal structure of easa, an old yellow enzyme from aspergillus2 fumigatus
54c3qy6A_



not modelled 23.5 17
PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase ywqe;
PDBTitle: crystal structures of ywqe from bacillus subtilis and cpsb from2 streptococcus pneumoniae, unique metal-dependent tyrosine3 phosphatases
55c3kruC_



not modelled 21.6 15
PDB header:oxidoreductase
Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase;
PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39
56d1muma_



not modelled 20.9 21
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Phosphoenolpyruvate mutase/Isocitrate lyase-like
57c3lyeA_



not modelled 20.5 25
PDB header:hydrolase
Chain: A: PDB Molecule:oxaloacetate acetyl hydrolase;
PDBTitle: crystal structure of oxaloacetate acetylhydrolase
58c3l5aA_



not modelled 20.4 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase;
PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus
59c6mywA_



not modelled 20.2 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:n-ethylmaleimide reductase;
PDBTitle: gluconobacter ene-reductase (gluer) mutant - t36a
60c4tv6A_



not modelled 20.1 9
PDB header:lyase
Chain: A: PDB Molecule:2-dehydro-3-deoxyglucarate aldolase;
PDBTitle: crystal structure of citrate synthase variant sbng e151q
61c4mg4G_



not modelled 19.7 15
PDB header:unknown function
Chain: G: PDB Molecule:phosphonomutase;
PDBTitle: crystal structure of a putative phosphonomutase from burkholderia2 cenocepacia j2315
62c4rnvD_



not modelled 19.6 10
PDB header:oxidoreductase/inhibitor
Chain: D: PDB Molecule:nadph dehydrogenase 1;
PDBTitle: g303 circular permutation of old yellow enzyme with the inhibitor p-2 hydroxybenzaldehyde
63c2i6dA_



not modelled 19.1 17
PDB header:transferase
Chain: A: PDB Molecule:rna methyltransferase, trmh family;
PDBTitle: the structure of a putative rna methyltransferase of the trmh family2 from porphyromonas gingivalis.
64c5uncB_



not modelled 18.8 20
PDB header:isomerase
Chain: B: PDB Molecule:phosphoenolpyruvate phosphomutase;
PDBTitle: the crystal structure of phosphoenolpyruvate phosphomutase from2 streptomyces platensis subsp. rosaceus
65c2qiwA_



not modelled 18.6 16
PDB header:transferase
Chain: A: PDB Molecule:pep phosphonomutase;
PDBTitle: crystal structure of a putative phosphoenolpyruvate phosphonomutase2 (ncgl1015, cgl1060) from corynebacterium glutamicum atcc 13032 at3 1.80 a resolution
66c6dvhF_



not modelled 18.6 12
PDB header:oxidoreductase
Chain: F: PDB Molecule:lactate 2-monooxygenase;
PDBTitle: lactate monooxygenase from mycobacterium smegmatis - c203a mutant
67c2hjpA_



not modelled 17.6 20
PDB header:hydrolase
Chain: A: PDB Molecule:phosphonopyruvate hydrolase;
PDBTitle: crystal structure of phosphonopyruvate hydrolase complex with2 phosphonopyruvate and mg++
68c1x7pB_



not modelled 17.2 21
PDB header:transferase
Chain: B: PDB Molecule:rrna methyltransferase;
PDBTitle: crystal structure of the spou methyltransferase avirb from2 streptomyces viridochromogenes in complex with the cofactor adomet
69d1qk1a2



not modelled 17.1 12
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Guanido kinase catalytic domain
70c6ahuJ_



not modelled 16.9 21
PDB header:hydrolase/rna
Chain: J: PDB Molecule:ribonuclease p protein subunit p30;
PDBTitle: cryo-em structure of human ribonuclease p with mature trna
71c3i4eA_



not modelled 16.7 7
PDB header:lyase
Chain: A: PDB Molecule:isocitrate lyase;
PDBTitle: crystal structure of isocitrate lyase from burkholderia2 pseudomallei
72c3hf3A_



not modelled 16.3 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:chromate reductase;
PDBTitle: old yellow enzyme from thermus scotoductus sa-01
73c3gkaB_



not modelled 16.3 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:n-ethylmaleimide reductase;
PDBTitle: crystal structure of n-ethylmaleimidine reductase from2 burkholderia pseudomallei
74d1ps9a1



not modelled 16.3 20
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
75c4rnxA_



not modelled 16.2 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph dehydrogenase 1;
PDBTitle: k154 circular permutation of old yellow enzyme
76c5epdA_



not modelled 16.1 5
PDB header:oxidorecctase
Chain: A: PDB Molecule:glycerol trinitrate reductase;
PDBTitle: crystal structure of glycerol trinitrate reductase xdpb from2 agrobacterium sp. r89-1 (apo form)
77c3bh1A_



not modelled 15.9 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0371 protein dip2346;
PDBTitle: crystal structure of protein dip2346 from corynebacterium diphtheriae
78c4mf4F_



not modelled 15.5 13
PDB header:lyase
Chain: F: PDB Molecule:hpch/hpai aldolase/citrate lyase family protein;
PDBTitle: crystal structure of a hpch/hpal aldolase/citrate lyase family protein2 from burkholderia cenocepacia j2315
79c5ocsB_



not modelled 15.5 17
PDB header:flavoprotein
Chain: B: PDB Molecule:putative nadh-depentdent flavin oxidoreductase;
PDBTitle: ene-reductase (er/oye) from ralstonia (cupriavidus) metallidurans
80d3c7bb2



not modelled 15.4 17
Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:DsrA/DsrB N-terminal-domain-like
81c6ei9A_



not modelled 15.4 11
PDB header:flavoprotein
Chain: A: PDB Molecule:trna-dihydrouridine synthase b;
PDBTitle: crystal structure of e. coli trna-dihydrouridine synthase b (dusb)
82c5kzkA_



not modelled 15.4 18
PDB header:rna binding protein
Chain: A: PDB Molecule:probable rna methyltransferase, trmh family;
PDBTitle: crystal structure of rrna methyltransferase from sinorhizobium2 meliloti
83c3ffsC_



not modelled 15.2 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:inosine-5-monophosphate dehydrogenase;
PDBTitle: the crystal structure of cryptosporidium parvum inosine-5'-2 monophosphate dehydrogenase
84c6de6B_



not modelled 15.1 10
PDB header:oxidoreductase
Chain: B: PDB Molecule:histamine dehydrogenase;
PDBTitle: 2.1 a resolution structure of histamine dehydrogenase from rhizobium2 sp. 4-9
85c3e5bB_



not modelled 15.0 13
PDB header:lyase
Chain: B: PDB Molecule:isocitrate lyase;
PDBTitle: 2.4 a crystal structure of isocitrate lyase from brucella melitensis
86c2v5jB_



not modelled 14.6 11
PDB header:lyase
Chain: B: PDB Molecule:2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase;
PDBTitle: apo class ii aldolase hpch
87c1izcA_



not modelled 14.3 10
PDB header:lyase
Chain: A: PDB Molecule:macrophomate synthase intermolecular diels-alderase;
PDBTitle: crystal structure analysis of macrophomate synthase
88d1izca_



not modelled 14.3 10
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:HpcH/HpaI aldolase
89c3qz6A_



not modelled 14.2 11
PDB header:lyase
Chain: A: PDB Molecule:hpch/hpai aldolase;
PDBTitle: the crystal structure of hpch/hpai aldolase from desulfitobacterium2 hafniense dcb-2
90c2wjeA_



not modelled 14.1 21
PDB header:hydrolase
Chain: A: PDB Molecule:tyrosine-protein phosphatase cpsb;
PDBTitle: crystal structure of the tyrosine phosphatase cps4b from2 steptococcus pneumoniae tigr4.
91c6daqA_



not modelled 14.1 23
PDB header:lyase
Chain: A: PDB Molecule:phdj;
PDBTitle: phdj bound to substrate intermediate
92c3dcpB_



not modelled 13.4 9
PDB header:hydrolase
Chain: B: PDB Molecule:histidinol-phosphatase;
PDBTitle: crystal structure of the putative histidinol phosphatase hisk from2 listeria monocytogenes. northeast structural genomics consortium3 target lmr141.
93c2a7nA_



not modelled 13.1 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:l(+)-mandelate dehydrogenase;
PDBTitle: crystal structure of the g81a mutant of the active chimera of (s)-2 mandelate dehydrogenase
94d1p4ca_



not modelled 13.0 11
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
95d1igwa_



not modelled 13.0 7
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Phosphoenolpyruvate mutase/Isocitrate lyase-like
96d1crka2



not modelled 12.5 10
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Guanido kinase catalytic domain
97c4e38A_



not modelled 12.5 13
PDB header:lyase
Chain: A: PDB Molecule:keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate
PDBTitle: crystal structure of probable keto-hydroxyglutarate-aldolase from2 vibrionales bacterium swat-3 (target efi-502156)
98d1zj8a1



not modelled 12.4 21
Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:Duplicated SiR/NiR-like domains 1 and 3
99c1apyA_



not modelled 12.2 10
PDB header:hydrolase
Chain: A: PDB Molecule:aspartylglucosaminidase;
PDBTitle: human aspartylglucosaminidase

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