Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3210c_(-)_3586840_3587535
DateThu Aug 8 16:20:40 BST 2019
Unique Job ID152c7385d4e02eaa
SequenceMPSPSSADQV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.073 Y:54.833 Z:46.309
Model (left) based on template c3ez0D_
Top template information
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized protein with ferritin-like fold;
PDBTitle: crystal structure of protein of unknown function with ferritin-like2 fold (yp_832262.1) from arthrobacter sp. fb24 at 2.33 a resolution
Confidence and coverage
Confidence:100.0% Coverage: 89%
206 residues ( 89% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3ez0D_



100.0 35
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized protein with ferritin-like fold;
PDBTitle: crystal structure of protein of unknown function with ferritin-like2 fold (yp_832262.1) from arthrobacter sp. fb24 at 2.33 a resolution
2c4mudA_



99.9 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:ring oxydation complex/ phenylacetic acid degradation
PDBTitle: crystal structure of a ring oxydation complex/ phenylacetic acid2 degradation-like protein (sso1313) from sulfolobus solfataricus p2 at3 2.43 a resolution
3d1otka_



99.9 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
4c3pw1A_



99.8 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:phenylacetic acid degradation protein paaa;
PDBTitle: the phenylacetyl-coa monooxygenase paaac subcomplex with phenylacetyl-2 coa
5c2inpD_



98.0 13
PDB header:oxidoreductase
Chain: D: PDB Molecule:phenol hydroxylase component phl;
PDBTitle: structure of the phenol hydroxylase-regulatory protein2 complex
6d1mhyb_



97.4 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
7c3pm5B_



97.4 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:benzoyl-coa oxygenase component b;
PDBTitle: crystal structure of boxb in mixed valent state with bound benzoyl-coa
8d2itba1



96.9 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:MiaE-like
9c6d9fA_



96.7 19
PDB header:lyase
Chain: A: PDB Molecule:putative vlmb homolog;
PDBTitle: protein 60 with aldehyde deformylating oxidase activity from2 kitasatospora setae
10c2vzbA_



96.6 15
PDB header:metal transport
Chain: A: PDB Molecule:putative bacterioferritin-related protein;
PDBTitle: a dodecameric thioferritin in the bacterial domain, characterization2 of the bacterioferritin-related protein from bacteroides fragilis
11d2fzfa1



96.5 18
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
12d2oh3a1



96.5 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:AMB4284-like
13c2clbP_



96.2 14
PDB header:metal binding protein
Chain: P: PDB Molecule:dps-like protein;
PDBTitle: the structure of the dps-like protein from sulfolobus2 solfataricus reveals a bacterioferritin-like di-metal3 binding site within a dps-like dodecameric assembly
14c3r2rA_



96.1 18
PDB header:metal binding protein
Chain: A: PDB Molecule:bacterioferritin;
PDBTitle: 1.65a resolution structure of iron soaked ftna from pseudomonas2 aeruginosa (ph 6.0)
15c2qqyA_



96.1 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:sigma b operon;
PDBTitle: crystal structure of ferritin like, diiron-carboxylate proteins from2 bacillus anthracis str. ames
16c3fvbB_



95.8 15
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: crystal structure of ferritin (bacterioferritin) from brucella2 melitensis
17c5ux1D_



95.8 13
PDB header:lyase
Chain: D: PDB Molecule:trna-(ms(2)io(6)a)-hydroxylase-like;
PDBTitle: protein 43 with aldehyde deformylating oxygenase activity from2 synechococcus
18c5xx9A_



95.4 14
PDB header:metal transport
Chain: A: PDB Molecule:bacterioferritin;
PDBTitle: crystal structure of bacterioferritin
19c3dhiA_



95.2 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:toluene 4-monooxygenase hydroxylase alpha subunit;
PDBTitle: crystal structure of reduced toluene 4-monoxygenase hydroxylase2 complexed with effector protein
20c3dhgB_



95.2 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:toluene 4-monooxygenase hydroxylase beta subunit;
PDBTitle: crystal structure of toluene 4-monoxygenase hydroxylase
21d2inca1



not modelled 95.2 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
22c3bknB_



not modelled 94.7 11
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: the structure of mycobacterial bacterioferritin
23c3gvyC_



not modelled 94.5 17
PDB header:metal binding protein
Chain: C: PDB Molecule:bacterioferritin;
PDBTitle: crystal structure of bacterioferritin from r.sphaeroides
24d2fkza1



not modelled 94.5 10
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
25d1mtyb_



not modelled 94.4 17
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
26d1j30a_



not modelled 94.3 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
27c5n5eM_



not modelled 93.9 20
PDB header:oxidoreductase
Chain: M: PDB Molecule:pfc_05175;
PDBTitle: crystal structure of encapsulated ferritin domain from pyrococcus2 furiosus pfc_05175
28d1jgca_



not modelled 93.9 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
29c4am4B_



not modelled 93.7 17
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: bacterioferritin from blastochloris viridis
30d1o9ra_



not modelled 93.6 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
31d2htna1



not modelled 93.5 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
32c4di0B_



not modelled 92.1 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: the structure of rubrerythrin from burkholderia pseudomallei
33c4r42B_



not modelled 91.8 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:alr3090 protein;
PDBTitle: crystal structure of katb, a manganese catalase from anabaena pcc7120
34d2incb1



not modelled 91.2 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
35d1nf4a_



not modelled 91.1 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
36c2innA_



not modelled 86.7 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:phenol hydroxylase component phn;
PDBTitle: structure of the phenol hydroxyalse-regulatory protein complex
37c4hr0A_



not modelled 82.5 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonuleotide reductase small subunit;
PDBTitle: r2-like ligand-binding oxidase with aerobically reconstituted metal2 cofactor
38c5da5R_



not modelled 81.4 14
PDB header:oxidoreductase
Chain: R: PDB Molecule:rru_a0973;
PDBTitle: crystal structure of rhodospirillum rubrum rru_a0973
39d1yuza1



not modelled 81.3 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
40d1lkoa1



not modelled 80.7 18
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
41d1jiga_



not modelled 77.7 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
42c4cy9A_



not modelled 77.5 12
PDB header:iron-binding protein
Chain: A: PDB Molecule:dpsa;
PDBTitle: dpsa14 from streptomyces coelicolor
43c2l9dA_



not modelled 77.1 33
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of the protein yp_546394.1, the first structural2 representative of the pfam family pf12112
44c4etrA_



not modelled 76.7 14
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: x-ray structure of pa2169 from pseudomonas aeruginosa
45d1n1qa_



not modelled 76.6 10
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
46d1vjxa_



not modelled 75.7 17
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
47c1dvbA_



not modelled 75.2 19
PDB header:electron transport
Chain: A: PDB Molecule:rubrerythrin;
PDBTitle: rubrerythrin
48c1yuzB_



not modelled 74.1 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
49c2c6rA_



not modelled 73.8 5
PDB header:dna-binding protein
Chain: A: PDB Molecule:dna-binding stress response protein, dps family;
PDBTitle: fe-soaked crystal structure of the dps92 from deinococcus2 radiodurans
50d1ji5a_



not modelled 73.7 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
51d1dpsa_



not modelled 72.4 11
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
52d1vela_



not modelled 69.5 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
53c2d5kC_



not modelled 68.3 10
PDB header:metal binding protein
Chain: C: PDB Molecule:dps family protein;
PDBTitle: crystal structure of dps from staphylococcus aureus
54c5ouwA_



not modelled 66.1 12
PDB header:metal binding protein
Chain: A: PDB Molecule:ferritin;
PDBTitle: metal free structure of synftn
55c2rccC_



not modelled 63.5 13
PDB header:oxidoreductase
Chain: C: PDB Molecule:ribonucleoside-diphosphate reductase subunit beta;
PDBTitle: crystal structure of putative class i ribonucleotide reductase2 (np_241368.1) from bacillus halodurans at 1.90 a resolution
56c5n5fC_



not modelled 62.8 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:encapsulated ferritin;
PDBTitle: crystal structure of haliangium ochraceum encapsulated ferritin
57d1nnqa1



not modelled 62.2 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
58c3bvkC_



not modelled 61.6 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:ferritin;
PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin
59c2z90D_



not modelled 60.6 5
PDB header:dna binding protein
Chain: D: PDB Molecule:starvation-inducible dna-binding protein or fine
PDBTitle: crystal structure of the second dps from mycobacterium2 smegmatis
60c2hr5B_



not modelled 59.7 17
PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
61c2c41K_



not modelled 59.2 11
PDB header:iron-binding/oxidation protein
Chain: K: PDB Molecule:dps family dna-binding stress response protein;
PDBTitle: x-ray structure of dps from thermosynechococcus elongatus
62d1mtyd_



not modelled 58.6 10
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
63d1yv1a1



not modelled 57.4 11
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
64d3dhza1



not modelled 54.5 10
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
65c4a25A_



not modelled 54.3 10
PDB header:metal binding protein
Chain: A: PDB Molecule:ferritin dps family protein;
PDBTitle: x-ray structure dps from kineococcus radiotolerans in2 complex with mn (ii) ions.
66c2chpC_



not modelled 53.0 13
PDB header:dna binding protein
Chain: C: PDB Molecule:metalloregulation dna-binding stress protein;
PDBTitle: crystal structure of the dodecameric ferritin mrga from b. subtilis2 168
67c2f7nA_



not modelled 52.5 11
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding stress response protein, dps family;
PDBTitle: structure of d. radiodurans dps-1
68d1m6ex_



not modelled 52.0 17
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Salicylic acid carboxyl methyltransferase (SAMT)
69c5uxgB_



not modelled 51.3 14
PDB header:lyase
Chain: B: PDB Molecule:aldehyde deformylating oxygenase;
PDBTitle: protein 84 with aldehyde deformylating oxygenase activity from2 sulfolobus tokodaii (monoclinic)
70c2vxxB_



not modelled 51.0 13
PDB header:dna-binding protein
Chain: B: PDB Molecule:starvation induced dna binding protein;
PDBTitle: x-ray structure of dpsa from thermosynechococcus elongatus
71c5hjhB_



not modelled 50.2 13
PDB header:metal binding protein
Chain: B: PDB Molecule:ferritin, dps family protein;
PDBTitle: dps4 from nostoc punctiforme in complex with fe ions
72c3kwoA_



not modelled 49.4 8
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative bacterioferritin;
PDBTitle: crystal structure of putative bacterioferritin from2 campylobacter jejuni
73c3e6sD_



not modelled 49.3 15
PDB header:oxidoreductase
Chain: D: PDB Molecule:ferritin;
PDBTitle: crystal structure of ferritin soaked with iron from pseudo-nitzschia2 multiseries
74c2rlwA_



not modelled 48.1 20
PDB header:toxin
Chain: A: PDB Molecule:plnf;
PDBTitle: three-dimensional structure of the two peptides that2 constitute the two-peptide bacteriocin plantaracin ef
75d1u5ta1



not modelled 43.3 26
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Vacuolar sorting protein domain
76d1vlga_



not modelled 42.2 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
77c3iq1A_



not modelled 41.8 9
PDB header:metal transport
Chain: A: PDB Molecule:dps family protein;
PDBTitle: crystal structure of dps protein from vibrio cholerae o1, a member of2 a broad superfamily of ferritin-like diiron-carboxylate proteins
78c2p1iA_



not modelled 41.3 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleotide reductase, small chain;
PDBTitle: plasmodium yoelii ribonucleotide reductase subunit r2 (py03671)
79c4cybI_



not modelled 40.7 8
PDB header:iron binding protein
Chain: I: PDB Molecule:putative dna protection protein;
PDBTitle: dpsc from streptomyces coelicolor
80d1brwa2



not modelled 40.2 21
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
81c2eg5C_



not modelled 40.2 17
PDB header:transferase
Chain: C: PDB Molecule:xanthosine methyltransferase;
PDBTitle: the structure of xanthosine methyltransferase
82c4mhlA_



not modelled 38.6 15
PDB header:protein binding
Chain: A: PDB Molecule:interleukin-11;
PDBTitle: the crystal structure of human interleukin-11
83d1tjoa_



not modelled 38.0 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
84c2xgwA_



not modelled 37.9 14
PDB header:metal binding protein
Chain: A: PDB Molecule:peroxide resistance protein;
PDBTitle: zinc-bound crystal structure of streptococcus pyogenes dpr
85d2yw6a1



not modelled 37.1 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
86c5wpnA_



not modelled 35.8 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferritin;
PDBTitle: zn-bound structure of chaetopterus variopedatus ferritin
87d1zpya1



not modelled 34.5 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:half-ferritin
88c1r2fB_



not modelled 34.2 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:protein (ribonucleotide reductase r2);
PDBTitle: ribonucleotide reductase r2f protein from salmonella2 typhimurium
89d1euma_



not modelled 34.0 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
90c2ib0A_



not modelled 33.7 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical alanine rich protein;
PDBTitle: crystal structure of a conserved hypothetical protein, rv2844, from2 mycobacterium tuberculosis
91d2ib0a1



not modelled 33.7 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Rv2844-like
92d1r2fa_



not modelled 30.7 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
93d1s3qa1



not modelled 29.9 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
94c2jd8C_



not modelled 29.7 16
PDB header:metal transport
Chain: C: PDB Molecule:ferritin homolog;
PDBTitle: crystal structure of the zn-soaked ferritin from the2 hyperthermophilic archaeal anaerobe pyrococcus furiosus
95c6a4uD_



not modelled 28.5 14
PDB header:metal binding protein
Chain: D: PDB Molecule:ferritin;
PDBTitle: the first crystal structure of crustacean ferritin that is a hybrid2 type of h and l ferritin
96c3hf1B_



not modelled 28.3 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 b;
PDBTitle: crystal structure of human p53r2
97d2cwla1



not modelled 28.2 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Manganese catalase (T-catalase)
98c2yjkF_



not modelled 27.9 9
PDB header:metal-binding protein
Chain: F: PDB Molecule:afp;
PDBTitle: structure of dps from microbacterium arborescens in the2 high iron form
99c1syyA_



not modelled 27.1 14
PDB header:replication,oxidoreductase
Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase beta chain;
PDBTitle: crystal structure of the r2 subunit of ribonucleotide reductase from2 chlamydia trachomatis
100d1syya_



not modelled 27.1 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
101c1brwB_



not modelled 27.1 17
PDB header:transferase
Chain: B: PDB Molecule:protein (pyrimidine nucleoside phosphorylase);
PDBTitle: the crystal structure of pyrimidine nucleoside2 phosphorylase in a closed conformation
102d1uoua2



not modelled 26.6 17
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
103c4bmtB_



not modelled 26.2 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit beta;
PDBTitle: crystal structure of ribonucleotide reductase di-iron nrdf2 from bacillus cereus
104d1mhyd_



not modelled 25.9 11
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
105c4cmyN_



not modelled 25.4 12
PDB header:metal transport
Chain: N: PDB Molecule:ferritin;
PDBTitle: chlorobium tepidum ferritin
106d1rcda_



not modelled 25.3 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
107c3b5iB_



not modelled 25.3 16
PDB header:transferase
Chain: B: PDB Molecule:s-adenosyl-l-methionine:salicylic acid carboxyl
PDBTitle: crystal structure of indole-3-acetic acid methyltransferase
108d1lb3a_



not modelled 23.9 17
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
109d1ohua_



not modelled 23.7 11
Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
110d1krqa_



not modelled 23.4 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
111c5vrdD_



not modelled 23.4 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:bifunctional coenzyme pqq synthesis protein c/d;
PDBTitle: crystal structure for methylobacterium extorquens pqqcd (natural2 fusion)
112c4wwrD_



not modelled 23.1 23
PDB header:transport protein
Chain: D: PDB Molecule:ubiquitin-like protein 4a;
PDBTitle: crystal structure of bag6-ubl4a dimerization domain
113c4z29B_



not modelled 23.0 29
PDB header:signaling protein
Chain: B: PDB Molecule:magnetotaxis protein mtxa;
PDBTitle: crystal structure of the magnetobacterial protein mtxa c-terminal2 domain
114c6mupK_



not modelled 22.2 50
PDB header:nuclear protein
Chain: K: PDB Molecule:centromere protein c;
PDBTitle: cenp-a nucleosome bound by two copies of cenp-c(cd) and two copies2 cenp-n(nt)
115c6mupL_



not modelled 22.2 50
PDB header:nuclear protein
Chain: L: PDB Molecule:centromere protein c;
PDBTitle: cenp-a nucleosome bound by two copies of cenp-c(cd) and two copies2 cenp-n(nt)
116c6muoK_



not modelled 22.2 50
PDB header:nuclear protein
Chain: K: PDB Molecule:centromere protein c;
PDBTitle: cenp-a nucleosome bound by two copies of cenp-c(cd) and one copy cenp-2 n(nt)

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