Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3222c_(-)_3598350_3598901
DateThu Aug 8 16:20:42 BST 2019
Unique Job IDd48797dedddc2d84
SequenceMSSPVSSRRL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:36.023 Y:26.379 Z:26.346
Model (left) based on template d1fjeb1
Top template information
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
Confidence and coverage
Confidence: 26.5% Coverage: 16%
29 residues ( 16% of your sequence) have been modelled with 26.5% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1fjeb1



26.5 24
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
2c5szwA_



17.4 20
PDB header:rna binding protein
Chain: A: PDB Molecule:elav-like protein 1;
PDBTitle: nmr solution structure of the rrm1 domain of the post-transcriptional2 regulator hur
3d2p5zx3



9.0 38
Fold:Phage tail proteins
Superfamily:Phage tail proteins
Family:Baseplate protein-like
4d2o34a1



8.1 57
Fold:T-fold
Superfamily:ApbE-like
Family:DVU1097-like
5c5zx5D_



7.4 33
PDB header:transferase
Chain: D: PDB Molecule:transient receptor potential cation channel subfamily m
PDBTitle: 3.3 angstrom structure of mouse trpm7 with edta
6c1g0vB_



7.3 71
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:protease a inhibitor 3;
PDBTitle: the structure of proteinase a complexed with a ia3 mutant, mvv
7d1akpa_



6.6 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Actinoxanthin-like
Family:Actinoxanthin-like
8c1kv9A_



6.1 29
PDB header:oxidoreductase
Chain: A: PDB Molecule:type ii quinohemoprotein alcohol dehydrogenase;
PDBTitle: structure at 1.9 a resolution of a quinohemoprotein alcohol2 dehydrogenase from pseudomonas putida hk5
9c4auoE_



5.1 52
PDB header:hydrolase/peptide
Chain: E: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide

Binding site prediction 

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