Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3224B_(-)_3600798_3601016
DateThu Aug 8 16:20:42 BST 2019
Unique Job IDbdd68ab0a97ab1bd
SequenceVPKAAMAKPA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:33.164 Y:38.220 Z:29.210
Model (left) based on template d1dbxa_
Top template information
Fold:YbaK/ProRS associated domain
Superfamily:YbaK/ProRS associated domain
Family:YbaK/ProRS associated domain
Confidence and coverage
Confidence: 99.6% Coverage: 86%
62 residues ( 86% of your sequence) have been modelled with 99.6% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1dbxa_



99.6 42
Fold:YbaK/ProRS associated domain
Superfamily:YbaK/ProRS associated domain
Family:YbaK/ProRS associated domain
2d1wdva_



99.6 25
Fold:YbaK/ProRS associated domain
Superfamily:YbaK/ProRS associated domain
Family:YbaK/ProRS associated domain
3c2dxaA_



99.5 34
PDB header:translation
Chain: A: PDB Molecule:protein ybak;
PDBTitle: crystal structure of trans editing enzyme prox from e.coli
4c2cx5B_



99.5 27
PDB header:translation
Chain: B: PDB Molecule:a putative trans-editing enzyme;
PDBTitle: crystal structure of a putative trans-editing enzyme for2 prolyl trna synthetase
5d1vkia_



99.5 17
Fold:YbaK/ProRS associated domain
Superfamily:YbaK/ProRS associated domain
Family:YbaK/ProRS associated domain
6d1vjfa_



99.4 19
Fold:YbaK/ProRS associated domain
Superfamily:YbaK/ProRS associated domain
Family:YbaK/ProRS associated domain
7c3memA_



99.4 10
PDB header:signaling protein
Chain: A: PDB Molecule:putative signal transduction protein;
PDBTitle: crystal structure of a putative signal transduction protein2 (maqu_0641) from marinobacter aquaeolei vt8 at 2.25 a resolution
8c3op6B_



99.3 17
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an oligo-nucleotide binding protein (lpg1207)2 from legionella pneumophila subsp. pneumophila str. philadelphia 1 at3 2.00 a resolution
9c4d2iB_



50.0 15
PDB header:hydrolase
Chain: B: PDB Molecule:hera;
PDBTitle: crystal structure of the hera hexameric dna translocase2 from sulfolobus solfataricus bound to amp-pnp
10c3uepB_



8.6 17
PDB header:protein transport
Chain: B: PDB Molecule:yscq-c, type iii secretion protein;
PDBTitle: crystal structure of yscq-c from yersinia pseudotuberculosis
11d1xi8a3



8.6 25
Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MoeA central domain-like
12c5jpqd_



8.3 19
PDB header:ribosome
Chain: D: PDB Molecule:wd40 domain proteins;
PDBTitle: cryo-em structure of the 90s pre-ribosome
13c3bqhA_



7.0 32
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb;
PDBTitle: structure of the central domain (msra) of neisseria meningitidis pilb2 (oxidized form)
14c2j89A_



6.8 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine sulfoxide reductase a;
PDBTitle: functional and structural aspects of poplar cytosolic and2 plastidial type a methionine sulfoxide reductases
15d2nqra3



6.4 14
Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MoeA central domain-like
16c2hbpA_



6.4 29
PDB header:endocytosis, protein binding
Chain: A: PDB Molecule:cytoskeleton assembly control protein sla1;
PDBTitle: solution structure of sla1 homology domain 1
17c4mj7B_



6.2 25
PDB header:rna binding protein
Chain: B: PDB Molecule:rrna-processing protein utp23;
PDBTitle: crystal structure of the pin domain of saccharomyces cerevisiae utp23
18d1spia_



6.1 14
Fold:Carbohydrate phosphatase
Superfamily:Carbohydrate phosphatase
Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like
19c5oezA_



5.7 14
PDB header:hydrolase
Chain: A: PDB Molecule:fbp protein;
PDBTitle: crystal structure of leishmania major fructose-1,6-bisphosphatase in2 apo form.
20d1bk4a_



5.5 18
Fold:Carbohydrate phosphatase
Superfamily:Carbohydrate phosphatase
Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like
21d1nuwa_



not modelled 5.3 18
Fold:Carbohydrate phosphatase
Superfamily:Carbohydrate phosphatase
Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like
22c2m86A_



not modelled 5.1 29
PDB header:protein binding/signaling protein
Chain: A: PDB Molecule:mco-pmi;
PDBTitle: solution structure of hdm2 with engineered cyclotide

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