1 c5mmjy_
99.9
25
PDB header: ribosomeChain: Y: PDB Molecule:
PDBTitle: structure of the small subunit of the chloroplast ribosome
2 c6dzkY_
99.9
84
PDB header: ribosomeChain: Y: PDB Molecule: ribosome hibernation promoting factor;
PDBTitle: cryo-em structure of mycobacterium smegmatis c(minus) 30s ribosomal2 subunit with mpy
3 c3ka5A_
99.9
43
PDB header: chaperoneChain: A: PDB Molecule: ribosome-associated protein y (psrp-1);
PDBTitle: crystal structure of ribosome-associated protein y (psrp-1)2 from clostridium acetobutylicum. northeast structural3 genomics consortium target id car123a
4 d1l4sa_
99.9
17
Fold: Ribosome binding protein Y (YfiA homologue)Superfamily: Ribosome binding protein Y (YfiA homologue)Family: Ribosome binding protein Y (YfiA homologue)
5 c2rqlA_
99.9
29
PDB header: translationChain: A: PDB Molecule: probable sigma-54 modulation protein;
PDBTitle: solution structure of the e. coli ribosome hibernation2 promoting factor hpf
6 c6qbzA_
99.9
24
PDB header: ribosomal proteinChain: A: PDB Molecule: ribosome hibernation promoting factor;
PDBTitle: solution structure of the n-terminal domain of the staphylococcus2 aureus hibernation promoting factor
7 c3tqmD_
99.9
22
PDB header: protein bindingChain: D: PDB Molecule: ribosome-associated factor y;
PDBTitle: structure of an ribosomal subunit interface protein from coxiella2 burnetii
8 d1imua_
99.9
18
Fold: Ribosome binding protein Y (YfiA homologue)Superfamily: Ribosome binding protein Y (YfiA homologue)Family: Ribosome binding protein Y (YfiA homologue)
9 c4fylB_
99.9
34
PDB header: translationChain: B: PDB Molecule: ribosome hibernation protein yhbh;
PDBTitle: high-resolution x-ray structure of hpf from vibrio cholerae
10 c3k2tA_
99.9
46
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: lmo2511 protein;
PDBTitle: crystal structure of lmo2511 protein from listeria2 monocytogenes, northeast structural genomics consortium3 target lkr84a
11 d2ywqa1
99.9
38
Fold: Ribosome binding protein Y (YfiA homologue)Superfamily: Ribosome binding protein Y (YfiA homologue)Family: Ribosome binding protein Y (YfiA homologue)
12 c3lyvF_
99.8
48
PDB header: chaperoneChain: F: PDB Molecule: ribosome-associated factor y;
PDBTitle: crystal structure of a domain of ribosome-associated factor y from2 streptococcus pyogenes serotype m6. northeast structural genomics3 consortium target id dr64a
13 c4jw1A_
47.3
36
PDB header: hydrolase activatorChain: A: PDB Molecule: effector protein b;
PDBTitle: crystal structure of n-terminal 618-residue fragment of lepb from2 legionella pneumophila
14 c3zf7R_
45.2
12
PDB header: ribosomeChain: R: PDB Molecule: 60s ribosomal protein l17, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
15 d1ohea1
40.1
12
Fold: (Phosphotyrosine protein) phosphatases IISuperfamily: (Phosphotyrosine protein) phosphatases IIFamily: Dual specificity phosphatase-like
16 c2j43A_
40.0
8
PDB header: carbohydrate-binding moduleChain: A: PDB Molecule: spydx;
PDBTitle: alpha-glucan recognition by family 41 carbohydrate-binding2 modules from streptococcal virulence factors
17 c1oheA_
39.2
12
PDB header: hydrolaseChain: A: PDB Molecule: cdc14b2 phosphatase;
PDBTitle: structure of cdc14b phosphatase with a peptide ligand
18 d1m0wa1
35.8
20
Fold: PreATP-grasp domainSuperfamily: PreATP-grasp domainFamily: Eukaryotic glutathione synthetase, substrate-binding domain
19 c3vcaA_
34.9
5
PDB header: oxidoreductaseChain: A: PDB Molecule: ring-hydroxylating dioxygenase;
PDBTitle: quaternary ammonium oxidative demethylation: x-ray crystallographic,2 resonance raman and uv-visible spectroscopic analysis of a rieske-3 type demethylase
20 c4v19W_
33.6
39
PDB header: ribosomeChain: W: PDB Molecule: mitoribosomal protein ul22m, mrpl22;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
21 c2j44A_
not modelled
33.2
19
PDB header: carbohydrate-binding moduleChain: A: PDB Molecule: alkaline amylopullulanase;
PDBTitle: alpha-glucan binding by a streptococcal virulence factor
22 c5nwmA_
not modelled
31.4
0
PDB header: signaling proteinChain: A: PDB Molecule: nuclear receptor coactivator 1;
PDBTitle: insight into the molecular recognition mechanism of the coactivator2 ncoa1 by stat6
23 c3n0qA_
not modelled
30.1
5
PDB header: oxidoreductaseChain: A: PDB Molecule: putative aromatic-ring hydroxylating dioxygenase;
PDBTitle: crystal structure of a putative aromatic-ring hydroxylating2 dioxygenase (tm1040_3219) from silicibacter sp. tm1040 at 1.80 a3 resolution
24 c4ce4W_
not modelled
29.5
37
PDB header: ribosomeChain: W: PDB Molecule: mrpl22;
PDBTitle: 39s large subunit of the porcine mitochondrial ribosome
25 c3j39P_
not modelled
27.8
21
PDB header: ribosomeChain: P: PDB Molecule: 60s ribosomal protein l17;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
26 c5o60T_
not modelled
27.8
21
PDB header: ribosomeChain: T: PDB Molecule: 50s ribosomal protein l22;
PDBTitle: structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis
27 d2zjrp1
not modelled
27.5
22
Fold: Ribosomal protein L22Superfamily: Ribosomal protein L22Family: Ribosomal protein L22
28 c2jvfA_
not modelled
27.3
19
PDB header: de novo proteinChain: A: PDB Molecule: de novo protein m7;
PDBTitle: solution structure of m7, a computationally-designed2 artificial protein
29 c3jywN_
not modelled
26.6
18
PDB header: ribosomeChain: N: PDB Molecule: 60s ribosomal protein l17(a);
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
30 c1vw4O_
not modelled
25.9
16
PDB header: ribosomeChain: O: PDB Molecule: 54s ribosomal protein l22, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
31 c2xp1A_
not modelled
24.7
11
PDB header: transcriptionChain: A: PDB Molecule: spt6;
PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6
32 c3j21S_
not modelled
24.3
24
PDB header: ribosomeChain: S: PDB Molecule: 50s ribosomal protein l22p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
33 d1i4ja_
not modelled
23.9
11
Fold: Ribosomal protein L22Superfamily: Ribosomal protein L22Family: Ribosomal protein L22
34 c5boiA_
not modelled
23.7
21
PDB header: unknown functionChain: A: PDB Molecule: germination protein ypeb;
PDBTitle: bacillus megaterium ypeb c-terminal domain
35 d1nnxa_
not modelled
22.8
24
Fold: OB-foldSuperfamily: Hypothetical protein YgiWFamily: Hypothetical protein YgiW
36 c3j3wS_
not modelled
22.6
17
PDB header: ribosomeChain: S: PDB Molecule: 50s ribosomal protein l22;
PDBTitle: atomic model of the immature 50s subunit from bacillus subtilis (state2 ii-a)
37 c1by0A_
not modelled
21.8
38
PDB header: rna binding proteinChain: A: PDB Molecule: protein (hepatitis delta antigen);
PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen
38 c2zylA_
not modelled
21.2
21
PDB header: oxidoreductaseChain: A: PDB Molecule: possible oxidoreductase;
PDBTitle: crystal structure of 3-ketosteroid-9-alpha-hydroxylase2 (ksha) from m. tuberculosis
39 c2de7B_
not modelled
21.1
17
PDB header: oxidoreductaseChain: B: PDB Molecule: terminal oxygenase component of carbazole;
PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase
40 c3nqrD_
not modelled
20.5
14
PDB header: transport proteinChain: D: PDB Molecule: magnesium and cobalt efflux protein corc;
PDBTitle: a putative cbs domain-containing protein from salmonella typhimurium2 lt2
41 d2v8qe2
not modelled
20.3
14
Fold: CBS-domain pairSuperfamily: CBS-domain pairFamily: CBS-domain pair
42 c4a17Q_
not modelled
19.5
18
PDB header: ribosomeChain: Q: PDB Molecule: rpl17;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.
43 d1egxa_
not modelled
19.4
15
Fold: PH domain-like barrelSuperfamily: PH domain-likeFamily: Enabled/VASP homology 1 domain (EVH1 domain)
44 c2ftcM_
not modelled
19.2
39
PDB header: ribosomeChain: M: PDB Molecule: mitochondrial ribosomal protein l22 isoform a;
PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome
45 c3u5eP_
not modelled
18.4
15
PDB header: ribosomeChain: P: PDB Molecule: 60s ribosomal protein l17-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 60s subunit, ribosome a
46 d2k0bx1
not modelled
18.3
29
Fold: RuvA C-terminal domain-likeSuperfamily: UBA-likeFamily: UBA domain
47 d1vqor1
not modelled
18.2
24
Fold: Ribosomal protein L22Superfamily: Ribosomal protein L22Family: Ribosomal protein L22
48 c3fwrB_
not modelled
17.8
29
PDB header: transcriptionChain: B: PDB Molecule: yqzb protein;
PDBTitle: crystal structure of the cbs domains from the bacillus subtilis ccpn2 repressor complexed with adp
49 c2zkrr_
not modelled
17.7
24
PDB header: ribosomal protein/rnaChain: R: PDB Molecule: rna expansion segment es39 part i;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
50 d2hkja2
not modelled
17.5
6
Fold: Ribosomal protein S5 domain 2-likeSuperfamily: Ribosomal protein S5 domain 2-likeFamily: DNA gyrase/MutL, second domain
51 c1v06A_
not modelled
17.2
22
PDB header: dna-binding proteinChain: A: PDB Molecule: hmg box-containing protein 1;
PDBTitle: axh domain of the transcription factor hbp1 from m.musculus
52 c4gi3C_
not modelled
17.1
42
PDB header: hydrolase/hydrolase inhibitorChain: C: PDB Molecule: greglin;
PDBTitle: crystal structure of greglin in complex with subtilisin
53 d2awia1
not modelled
17.0
35
Fold: lambda repressor-like DNA-binding domainsSuperfamily: lambda repressor-like DNA-binding domainsFamily: PrgX N-terminal domain-like
54 c5mlcU_
not modelled
16.9
21
PDB header: ribosomeChain: U: PDB Molecule: 50s ribosomal protein l22, chloroplastic;
PDBTitle: cryo-em structure of the spinach chloroplast ribosome reveals the2 location of plastid-specific ribosomal proteins and extensions
55 c4wujB_
not modelled
16.9
6
PDB header: circadian clock proteinChain: B: PDB Molecule: glycoside hydrolase family 15, cellulose signaling
PDBTitle: structural biochemistry of a fungal lov domain photoreceptor reveals2 an evolutionarily conserved pathway integrating blue-light and3 oxidative stress
56 c3gcfC_
not modelled
16.3
9
PDB header: oxidoreductaseChain: C: PDB Molecule: terminal oxygenase component of carbazole 1,9a-
PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from2 nocardioides aromaticivorans ic177
57 c5xw4A_
not modelled
16.2
19
PDB header: cell cycleChain: A: PDB Molecule: tyrosine-protein phosphatase cdc14;
PDBTitle: crystal structure of budding yeast cdc14p (wild type) in the apo state
58 c1gmjD_
not modelled
16.2
25
PDB header: atpase inhibitorChain: D: PDB Molecule: atpase inhibitor;
PDBTitle: the structure of bovine if1, the regulatory subunit of mitochondrial2 f-atpase
59 d2gycq1
not modelled
16.2
16
Fold: Ribosomal protein L22Superfamily: Ribosomal protein L22Family: Ribosomal protein L22
60 c2vlgD_
not modelled
16.0
7
PDB header: transferaseChain: D: PDB Molecule: sporulation kinase a;
PDBTitle: kina pas-a domain, homodimer
61 c1yavB_
not modelled
16.0
12
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: hypothetical protein bsu14130;
PDBTitle: crystal structure of cbs domain-containing protein ykul2 from bacillus subtilis
62 c6h1wA_
not modelled
15.9
18
PDB header: unknown functionChain: A: PDB Molecule: mj1004;
PDBTitle: crystal structure of protein mj1004 from mathanocaldococcus jannaschii
63 d2b1xa1
not modelled
15.7
10
Fold: ISP domainSuperfamily: ISP domainFamily: Ring hydroxylating alpha subunit ISP domain
64 c3zqbB_
not modelled
15.7
16
PDB header: cell invasionChain: B: PDB Molecule: protein prgi, cell invasion protein sipd;
PDBTitle: prgi-sipd from salmonella typhimurium
65 c2m5jA_
not modelled
15.1
6
PDB header: signaling proteinChain: A: PDB Molecule: hasr protein;
PDBTitle: solution structure of the periplasmic signaling domain of hasr, a2 tonb-dependent outer membrane heme transporter
66 c5ts4A_
not modelled
15.1
21
PDB header: de novo proteinChain: A: PDB Molecule: denovo ntf2;
PDBTitle: crystal structure of a de novo designed protein with curved beta-sheet
67 d1kx5b_
not modelled
14.8
22
Fold: Histone-foldSuperfamily: Histone-foldFamily: Nucleosome core histones
68 c2outA_
not modelled
14.5
18
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: mu-like prophage flumu protein gp35, protein
PDBTitle: solution structure of hi1506, a novel two domain protein2 from haemophilus influenzae
69 c4ky3A_
not modelled
14.5
32
PDB header: de novo proteinChain: A: PDB Molecule: designed protein or327;
PDBTitle: three-dimensional structure of the orthorhombic crystal of2 computationally designed insertion domain , northeast structural3 genomics consortium (nesg) target or327
70 d2bm0a4
not modelled
14.3
14
Fold: Ferredoxin-likeSuperfamily: EF-G C-terminal domain-likeFamily: EF-G/eEF-2 domains III and V
71 d1rq8a_
not modelled
14.0
6
Fold: IF3-likeSuperfamily: YhbY-likeFamily: YhbY-like
72 c3i8nB_
not modelled
13.7
11
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: uncharacterized protein vp2912;
PDBTitle: a domain of a conserved functionally known protein from2 vibrio parahaemolyticus rimd 2210633.
73 d2yzia1
not modelled
13.4
12
Fold: CBS-domain pairSuperfamily: CBS-domain pairFamily: CBS-domain pair
74 d1vr9a3
not modelled
13.4
14
Fold: CBS-domain pairSuperfamily: CBS-domain pairFamily: CBS-domain pair
75 c1vr9B_
not modelled
13.4
14
PDB header: unknown functionChain: B: PDB Molecule: cbs domain protein/act domain protein;
PDBTitle: crystal structure of a cbs domain pair/act domain protein (tm0892)2 from thermotoga maritima at 1.70 a resolution
76 d1nyta2
not modelled
13.3
7
Fold: Aminoacid dehydrogenase-like, N-terminal domainSuperfamily: Aminoacid dehydrogenase-like, N-terminal domainFamily: Shikimate dehydrogenase-like
77 c4irtA_
not modelled
13.3
13
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: crystal structure of a putative neuraminidase (bacova_03493) from2 bacteroides ovatus atcc 8483 at 1.74 a resolution
78 c3jtfB_
not modelled
13.2
14
PDB header: transport proteinChain: B: PDB Molecule: magnesium and cobalt efflux protein;
PDBTitle: the cbs domain pair structure of a magnesium and cobalt efflux protein2 from bordetella parapertussis in complex with amp
79 d1qqfa_
not modelled
13.1
10
Fold: alpha/alpha toroidSuperfamily: Terpenoid cyclases/Protein prenyltransferasesFamily: Complement components
80 d1jo0a_
not modelled
13.0
11
Fold: IF3-likeSuperfamily: YhbY-likeFamily: YhbY-like
81 c2jy8A_
not modelled
13.0
29
PDB header: protein bindingChain: A: PDB Molecule: ubiquitin-binding protein p62;
PDBTitle: nmr structure of the ubiquitin associated (uba) domain of2 p62 (sqstm1) in complex with ubiquitin. rdc refined
82 d3bb6a1
not modelled
13.0
14
Fold: Double-stranded beta-helixSuperfamily: Clavaminate synthase-likeFamily: TehB-like
83 c3lhhA_
not modelled
12.9
11
PDB header: membrane proteinChain: A: PDB Molecule: cbs domain protein;
PDBTitle: the crystal structure of cbs domain protein from shewanella2 oneidensis mr-1.
84 d1lr0a_
not modelled
12.3
14
Fold: TolA/TonB C-terminal domainSuperfamily: TolA/TonB C-terminal domainFamily: TolA
85 d1wqla1
not modelled
12.3
14
Fold: ISP domainSuperfamily: ISP domainFamily: Ring hydroxylating alpha subunit ISP domain
86 d2bmoa1
not modelled
12.2
5
Fold: ISP domainSuperfamily: ISP domainFamily: Ring hydroxylating alpha subunit ISP domain
87 d1rrpb_
not modelled
11.9
12
Fold: PH domain-like barrelSuperfamily: PH domain-likeFamily: Ran-binding domain
88 c3l2iB_
not modelled
11.9
13
PDB header: lyaseChain: B: PDB Molecule: 3-dehydroquinate dehydratase;
PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2.
89 d1sr9a3
not modelled
11.8
10
Fold: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domainSuperfamily: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domainFamily: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
90 d3dl3a1
not modelled
11.7
11
Fold: Double-stranded beta-helixSuperfamily: Clavaminate synthase-likeFamily: TehB-like
91 c1p74B_
not modelled
11.6
13
PDB header: oxidoreductaseChain: B: PDB Molecule: shikimate 5-dehydrogenase;
PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from haemophilus2 influenzae
92 c3kxeD_
not modelled
11.5
29
PDB header: protein bindingChain: D: PDB Molecule: antitoxin protein pard-1;
PDBTitle: a conserved mode of protein recognition and binding in a2 pard-pare toxin-antitoxin complex
93 d1pvma4
not modelled
11.5
18
Fold: CBS-domain pairSuperfamily: CBS-domain pairFamily: CBS-domain pair
94 c1m0tB_
not modelled
11.4
20
PDB header: ligaseChain: B: PDB Molecule: glutathione synthetase;
PDBTitle: yeast glutathione synthase
95 d1ln4a_
not modelled
11.3
9
Fold: IF3-likeSuperfamily: YhbY-likeFamily: YhbY-like
96 d2e9xd1
not modelled
11.0
27
Fold: GINS helical bundle-likeSuperfamily: GINS helical bundle-likeFamily: SLD5 N-terminal domain-like
97 d2dy1a4
not modelled
10.9
14
Fold: Ferredoxin-likeSuperfamily: EF-G C-terminal domain-likeFamily: EF-G/eEF-2 domains III and V
98 d2ooxe1
not modelled
10.8
14
Fold: CBS-domain pairSuperfamily: CBS-domain pairFamily: CBS-domain pair
99 c5cegC_
not modelled
10.8
6
PDB header: toxinChain: C: PDB Molecule: addiction module antidote protein, copg/arc/metj family;
PDBTitle: x-ray structure of toxin/anti-toxin complex from mesorhizobium2 opportunistum