Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3243c_(-)_3622246_3623088
DateThu Aug 8 16:20:44 BST 2019
Unique Job ID4b5b8184451b70f8
SequenceMSPRVPRLRW ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:27.148 Y:34.837 Z:46.834
Model (left) based on template d1q42a_
Top template information
Fold:Cystatin-like
Superfamily:NTF2-like
Family:NTF2-like
Confidence and coverage
Confidence: 40.6% Coverage: 19%
52 residues ( 19% of your sequence) have been modelled with 40.6% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1q42a_



40.6 33
Fold:Cystatin-like
Superfamily:NTF2-like
Family:NTF2-like
2d1h54a2



27.1 18
Fold:Supersandwich
Superfamily:Galactose mutarotase-like
Family:Glycosyltransferase family 36 N-terminal domain
3c2ka4B_



26.4 67
PDB header:transcription regulator
Chain: B: PDB Molecule:signal transducer and activator of transcription
PDBTitle: nmr structure of the cbp-taz1/stat2-tad complex
4c3al0B_



26.0 21
PDB header:ligase/rna
Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;
PDBTitle: crystal structure of the glutamine transamidosome from thermotoga2 maritima in the glutamylation state.
5d1qnia1



25.5 21
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Nitrosocyanin
6c2g5iB_



25.1 13
PDB header:ligase
Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase
PDBTitle: structure of trna-dependent amidotransferase gatcab2 complexed with adp-alf4
7d2f2ab2



24.0 13
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:GatB/GatE catalytic domain-like
8d1n9ra_



19.7 19
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
9c3iv6C_



17.0 25
PDB header:oxidoreductase
Chain: C: PDB Molecule:putative zn-dependent alcohol dehydrogenase;
PDBTitle: crystal structure of putative zn-dependent alcohol dehydrogenases from2 rhodobacter sphaeroides.
10c3ip4B_



15.5 30
PDB header:ligase
Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;
PDBTitle: the high resolution structure of gatcab
11c3h0mE_



15.0 50
PDB header:ligase
Chain: E: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase
PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus
12c1wu2B_



14.5 17
PDB header:structural genomics,biosynthetic protein
Chain: B: PDB Molecule:molybdopterin biosynthesis moea protein;
PDBTitle: crystal structure of molybdopterin biosynthesis moea2 protein from pyrococcus horikoshii ot3
13c4wj3K_



14.1 40
PDB header:ligase/rna
Chain: K: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;
PDBTitle: crystal structure of the asparagine transamidosome from pseudomonas2 aeruginosa
14c3kfuI_



13.9 40
PDB header:ligase/rna
Chain: I: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;
PDBTitle: crystal structure of the transamidosome
15c4n0iB_



13.8 30
PDB header:ligase
Chain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit b,
PDBTitle: crystal structure of s. cerevisiae mitochondrial gatfab in complex2 with glutamine
16c4wj3H_



13.7 40
PDB header:ligase/rna
Chain: H: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;
PDBTitle: crystal structure of the asparagine transamidosome from pseudomonas2 aeruginosa
17c4wj3E_



13.7 40
PDB header:ligase/rna
Chain: E: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;
PDBTitle: crystal structure of the asparagine transamidosome from pseudomonas2 aeruginosa
18c4wj3B_



13.7 40
PDB header:ligase/rna
Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;
PDBTitle: crystal structure of the asparagine transamidosome from pseudomonas2 aeruginosa
19c3kfuF_



13.4 40
PDB header:ligase/rna
Chain: F: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;
PDBTitle: crystal structure of the transamidosome
20c4wwuD_



13.3 29
PDB header:transport protein
Chain: D: PDB Molecule:mrna export factor mex67;
PDBTitle: structure of mex67:mtr2
21c5g2rA_



not modelled 13.3 21
PDB header:transferase
Chain: A: PDB Molecule:molybdopterin biosynthesis protein cnx1;
PDBTitle: crystal structure of the mo-insertase domain cnx1e from2 arabidopsis thaliana
22c2ogsA_



not modelled 12.8 20
PDB header:hydrolase
Chain: A: PDB Molecule:thermostable carboxylesterase est50;
PDBTitle: crystal structure of the geobacillus stearothermophilus2 carboxylesterase est55 at ph 6.2
23d2d6fc3



not modelled 12.2 15
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:GatB/GatE catalytic domain-like
24c5nbbA_



not modelled 12.2 28
PDB header:chaperone
Chain: A: PDB Molecule:rna chaperone proq;
PDBTitle: structure of the c-terminal domain of the escherichia coli proq rna2 binding protein
25c1n9sH_



not modelled 11.2 17
PDB header:translation
Chain: H: PDB Molecule:small nuclear ribonucleoprotein f;
PDBTitle: crystal structure of yeast smf in spacegroup p43212
26d1xi8a3



not modelled 10.9 23
Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MoeA central domain-like
27c2qm3A_



not modelled 10.5 19
PDB header:transferase
Chain: A: PDB Molecule:predicted methyltransferase;
PDBTitle: crystal structure of a predicted methyltransferase from pyrococcus2 furiosus
28d2nqra3



not modelled 10.3 28
Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MoeA central domain-like
29d1j3ka_



not modelled 10.3 33
Fold:Dihydrofolate reductase-like
Superfamily:Dihydrofolate reductase-like
Family:Dihydrofolate reductases
30c3cseA_



not modelled 9.9 47
PDB header:oxidoreductase
Chain: A: PDB Molecule:dihydrofolate reductase;
PDBTitle: candida glabrata dihydrofolate reductase complexed with nadph and 2,4-2 diamino-5-(3-(2,5-dimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine3 (ucp120b)
31c6j9mB_



not modelled 9.8 13
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:acriic2;
PDBTitle: nmebh+acriic2
32c1b9uA_



not modelled 9.8 50
PDB header:hydrolase
Chain: A: PDB Molecule:protein (atp synthase);
PDBTitle: membrane domain of the subunit b of the e.coli atp synthase
33c3rg9A_



not modelled 9.6 33
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: A: PDB Molecule:bifunctional dihydrofolate reductase-thymidylate synthase;
PDBTitle: trypanosoma brucei dihydrofolate reductase (tbdhfr) in complex with2 wr99210
34c4c92B_



not modelled 9.0 24
PDB header:transcription
Chain: B: PDB Molecule:u6 snrna-associated sm-like protein lsm2;
PDBTitle: crystal structure of the yeast lsm1-7 complex
35c3dg8B_



not modelled 8.9 33
PDB header:oxidoreductase, transferase
Chain: B: PDB Molecule:bifunctional dihydrofolate reductase-thymidylate synthase;
PDBTitle: quadruple mutant (n51i+c59r+s108n+i164l) plasmodium falciparum2 dihydrofolate reductase-thymidylate synthase (pfdhfr-ts) complexed3 with rjf670, nadph, and dump
36d1qe3a_



not modelled 8.9 33
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
37c6drsA_



not modelled 8.5 27
PDB header:antifungal protein/inhibitor
Chain: A: PDB Molecule:dihydrofolate reductase, putative;
PDBTitle: dihydrofolate reductase (dhfr) of aspergillus flavus in complex with a2 small molecule inhibitor
38c2blcA_



not modelled 8.4 40
PDB header:oxidoreductase
Chain: A: PDB Molecule:dihydrofolate reductase-thymidylate synthase;
PDBTitle: sp21 double mutant p. vivax dihydrofolate reductase in complex with2 des-chloropyrimethamine
39c3dh0B_



not modelled 8.1 27
PDB header:transferase
Chain: B: PDB Molecule:sam dependent methyltransferase;
PDBTitle: crystal structure of a sam dependent methyltransferase from2 aquifex aeolicus
40d1zq1c3



not modelled 7.9 20
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:GatB/GatE catalytic domain-like
41c6ghbB_



not modelled 7.3 23
PDB header:protein binding
Chain: B: PDB Molecule:upf0413 protein gk0824;
PDBTitle: crystal structure of spx in complex with yjbh (oxidized)
42d1ehia1



not modelled 7.2 36
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
43d1gtda_



not modelled 7.0 14
Fold:PurS-like
Superfamily:PurS-like
Family:PurS subunit of FGAM synthetase
44c1z8yE_



not modelled 6.8 22
PDB header:virus
Chain: E: PDB Molecule:spike glycoprotein e1;
PDBTitle: mapping the e2 glycoprotein of alphaviruses
45c2gidP_



not modelled 6.7 21
PDB header:translation
Chain: P: PDB Molecule:mitochondrial rna-binding protein 2;
PDBTitle: crystal structures of trypanosoma bruciei mrp1/mrp2
46d2giaa1



not modelled 6.6 21
Fold:ssDNA-binding transcriptional regulator domain
Superfamily:ssDNA-binding transcriptional regulator domain
Family:Guide RNA binding protein gBP
47d1i8fa_



not modelled 6.6 29
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
48c2dgbA_



not modelled 6.3 32
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein purs;
PDBTitle: structure of thermus thermophilus purs in the p21 form
49d1wu2a3



not modelled 6.2 21
Fold:Molybdenum cofactor biosynthesis proteins
Superfamily:Molybdenum cofactor biosynthesis proteins
Family:MoeA central domain-like
50c1ld4O_



not modelled 6.1 22
PDB header:virus
Chain: O: PDB Molecule:spike glycoprotein e1;
PDBTitle: placement of the structural proteins in sindbis virus
51d1t4aa_



not modelled 6.0 41
Fold:PurS-like
Superfamily:PurS-like
Family:PurS subunit of FGAM synthetase
52c2d6fC_



not modelled 5.9 14
PDB header:ligase/rna
Chain: C: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit e;
PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
53c5x7hA_



not modelled 5.9 40
PDB header:transferase
Chain: A: PDB Molecule:cycloisomaltooligosaccharide glucanotransferase;
PDBTitle: crystal structure of paenibacillus sp. 598k2 cycloisomaltooligosaccharide glucanotransferase complexed with3 cycloisomaltoheptaose
54d1p1ca_



not modelled 5.9 32
Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Guanidinoacetate methyltransferase
55c2xfbF_



not modelled 5.7 12
PDB header:virus
Chain: F: PDB Molecule:e1 envelope glycoprotein;
PDBTitle: the chikungunya e1 e2 envelope glycoprotein complex fit into2 the sindbis virus cryo-em map
56c3n42F_



not modelled 5.6 12
PDB header:viral protein
Chain: F: PDB Molecule:e1 envelope glycoprotein;
PDBTitle: crystal structures of the mature envelope glycoprotein complex (furin2 cleavage) of chikungunya virus.
57c2xfcD_



not modelled 5.5 12
PDB header:virus
Chain: D: PDB Molecule:e1 envelope glycoprotein;
PDBTitle: the chikungunya e1 e2 envelope glycoprotein complex fit into2 the semliki forest virus cryo-em map
58c3muwE_



not modelled 5.5 22
PDB header:virus
Chain: E: PDB Molecule:structural polyprotein;
PDBTitle: pseudo-atomic structure of the e2-e1 protein shell in sindbis virus
59d1e4ea1



not modelled 5.5 29
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:D-Alanine ligase N-terminal domain
60d1juva_



not modelled 5.4 33
Fold:Dihydrofolate reductase-like
Superfamily:Dihydrofolate reductase-like
Family:Dihydrofolate reductases
61c5cohA_



not modelled 5.2 29
PDB header:oxidoreductase
Chain: A: PDB Molecule:frne protein;
PDBTitle: crystal structure of a novel disulfide oxidoreductase from deinococcus2 radiodurans crystallized in presence of beta-mercaptoethanol
62c6q2zB_



not modelled 5.2 43
PDB header:unknown function
Chain: B: PDB Molecule:upf0339 family protein;
PDBTitle: nmr solution structure of the hvo_2922 protein from haloferax volcanii
63c2yx5A_



not modelled 5.1 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0062 protein mj1593;
PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway
64d1fwxa1



not modelled 5.0 15
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Nitrosocyanin

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