Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3252c_(alkB)_3630735_3631985
DateThu Aug 8 16:20:45 BST 2019
Unique Job ID9b11e4ad0195cf27
SequenceMTTQIGSGGP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:60.279 Y:59.957 Z:49.550
Model (left) based on template c4zyoA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coa desaturase;
PDBTitle: crystal structure of human integral membrane stearoyl-coa desaturase2 with substrate
Confidence and coverage
Confidence: 98.9% Coverage: 59%
247 residues ( 59% of your sequence) have been modelled with 98.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4zyoA_



98.9 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coa desaturase;
PDBTitle: crystal structure of human integral membrane stearoyl-coa desaturase2 with substrate
2c4ymkA_



98.7 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:acyl-coa desaturase 1;
PDBTitle: crystal structure of stearoyl-coenzyme a desaturase 1
3c5lnkn_



37.3 25
PDB header:oxidoreductase
Chain: N: PDB Molecule:mitochondrial complex i, nd2 subunit;
PDBTitle: entire ovine respiratory complex i
4c2i47A_



34.9 56
PDB header:hydrolase
Chain: A: PDB Molecule:adam 17;
PDBTitle: crystal structure of catalytic domain of tace with inhibitor
5d2i47a1



32.9 56
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:TNF-alpha converting enzyme, TACE, catalytic domain
6c3b8zB_



27.6 50
PDB header:hydrolase
Chain: B: PDB Molecule:protein adamts-5;
PDBTitle: high resolution crystal structure of the catalytic domain of adamts-52 (aggrecanase-2)
7c4a01B_



26.2 14
PDB header:hydrolase
Chain: B: PDB Molecule:proton pyrophosphatase;
PDBTitle: crystal structure of the h-translocating pyrophosphatase
8d1bswa_



25.3 67
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
9d1r55a_



24.0 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
10d1atla_



23.2 60
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
11c4dd8B_



22.7 60
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:disintegrin and metalloproteinase domain-containing protein
PDBTitle: adam-8 metalloproteinase domain with bound batimastat
12c1yp1A_



22.6 50
PDB header:hydrolase
Chain: A: PDB Molecule:fii;
PDBTitle: crystal structure of a non-hemorrhagic fibrin(ogen)olytic2 metalloproteinase from venom of agkistrodon acutus
13c3cqbB_



22.5 44
PDB header:hydrolase
Chain: B: PDB Molecule:probable protease htpx homolog;
PDBTitle: crystal structure of heat shock protein htpx domain from vibrio2 parahaemolyticus rimd 2210633
14c2rjpC_



22.3 40
PDB header:hydrolase
Chain: C: PDB Molecule:adamts-4;
PDBTitle: crystal structure of adamts4 with inhibitor bound
15d1nd1a_



22.2 56
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
16c2erpA_



22.0 70
PDB header:toxin
Chain: A: PDB Molecule:vascular apoptosis-inducing protein 1;
PDBTitle: crystal structure of vascular apoptosis-inducing protein-1(inhibitor-2 bound form)
17d1wnia_



21.1 40
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
18d1x1na1



20.9 25
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
19c3k7nA_



20.7 40
PDB header:hydrolase
Chain: A: PDB Molecule:k-like;
PDBTitle: structures of two elapid snake venom metalloproteases with2 distinct activities highlight the disulfide patterns in the3 d domain of adamalysin family proteins
20d4aiga_



20.7 56
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
21c2dw1B_



not modelled 20.4 60
PDB header:apoptosis, toxin
Chain: B: PDB Molecule:catrocollastatin;
PDBTitle: crystal structure of vap2 from crotalus atrox venom (form 2-2 crystal)
22c2v4bB_



not modelled 20.2 60
PDB header:hydrolase
Chain: B: PDB Molecule:adamts-1;
PDBTitle: crystal structure of human adamts-1 catalytic domain and cysteine-2 rich domain (apo-form)
23c6be6D_



not modelled 20.1 67
PDB header:membrane protein
Chain: D: PDB Molecule:disintegrin and metalloproteinase domain-containing protein
PDBTitle: adam10 extracellular domain
24d1quaa_



not modelled 19.8 56
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
25d1kufa_



not modelled 19.6 44
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Reprolysin-like
26c2e3xA_



not modelled 19.6 29
PDB header:hydrolase, blood clotting, toxin
Chain: A: PDB Molecule:coagulation factor x-activating enzyme heavy chain;
PDBTitle: crystal structure of russell's viper venom metalloproteinase
27c3k7lA_



not modelled 19.6 78
PDB header:hydrolase
Chain: A: PDB Molecule:atragin;
PDBTitle: structures of two elapid snake venom metalloproteases with2 distinct activities highlight the disulfide patterns in the3 d domain of adamalysin family proteins
28c2rjqA_



not modelled 19.4 50
PDB header:hydrolase
Chain: A: PDB Molecule:adamts-5;
PDBTitle: crystal structure of adamts5 with inhibitor bound
29d1mxga1



not modelled 17.3 33
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
30c3g5cA_



not modelled 16.5 20
PDB header:membrane protein
Chain: A: PDB Molecule:adam 22;
PDBTitle: structural and biochemical studies on the ectodomain of human adam22
31c2zfnA_



not modelled 16.2 17
PDB header:transferase
Chain: A: PDB Molecule:regulator of ty1 transposition protein 109;
PDBTitle: self-acetylation mediated histone h3 lysine 56 acetylation by rtt109
32c2pmzW_



not modelled 15.5 21
PDB header:translation, transferase
Chain: W: PDB Molecule:dna-directed rna polymerase subunit k;
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
33d1tz7a1



not modelled 15.4 18
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
34c6h9oB_



not modelled 14.6 50
PDB header:cell cycle
Chain: B: PDB Molecule:cell division protein ftsb;
PDBTitle: complex of the periplasmic domains of bacterial cell division proteins2 ftsq and ftsb
35c6h9oD_



not modelled 14.6 50
PDB header:cell cycle
Chain: D: PDB Molecule:cell division protein ftsb;
PDBTitle: complex of the periplasmic domains of bacterial cell division proteins2 ftsq and ftsb
36d1npca_



not modelled 14.2 38
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Thermolysin-like
37c4ainB_



not modelled 14.2 9
PDB header:membrane protein
Chain: B: PDB Molecule:glycine betaine transporter betp;
PDBTitle: crystal structure of betp with asymmetric protomers.
38c2j83B_



not modelled 13.7 50
PDB header:hydrolase
Chain: B: PDB Molecule:ulilysin;
PDBTitle: ulilysin metalloprotease in complex with batimastat.
39c5mtzA_



not modelled 13.5 12
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease z;
PDBTitle: crystal structure of a long form rnase z from yeast
40d1eswa_



not modelled 13.2 18
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
41d1u4ga_



not modelled 13.0 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Thermolysin-like
42c3nqxA_



not modelled 12.9 50
PDB header:hydrolase
Chain: A: PDB Molecule:secreted metalloprotease mcp02;
PDBTitle: crystal structure of vibriolysin mcp-02 mature enzyme, a zinc2 metalloprotease from m4 family
43d1bqqm_



not modelled 12.8 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
44c4oojB_



not modelled 12.7 25
PDB header:unknown function
Chain: B: PDB Molecule:sidc, interaptin;
PDBTitle: crystal structure of the n-terminal domain of the legionella2 pneumophila protein sidc at 2.4a resolution
45c3nqzB_



not modelled 12.6 50
PDB header:hydrolase
Chain: B: PDB Molecule:secreted metalloprotease mcp02;
PDBTitle: crystal structure of the autoprocessed vibriolysin mcp-02 with e369a2 mutation
46c3d35A_



not modelled 12.6 17
PDB header:transferase
Chain: A: PDB Molecule:regulator of ty1 transposition protein 109;
PDBTitle: crystal structure of rtt109-ac-coa complex
47c1yo4A_



not modelled 12.5 32
PDB header:viral protein
Chain: A: PDB Molecule:hypothetical protein x4;
PDBTitle: solution structure of the sars coronavirus orf 7a coded x42 protein
48d1bqba_



not modelled 12.3 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Thermolysin-like
49d1kjpa_



not modelled 12.3 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Thermolysin-like
50c3dtkA_



not modelled 12.3 50
PDB header:gene regulation
Chain: A: PDB Molecule:irre protein;
PDBTitle: crystal structure of the irre protein, a central regulator2 of dna damage repair in deinococcaceae
51c4il3B_



not modelled 12.0 22
PDB header:hydrolase
Chain: B: PDB Molecule:ste24p;
PDBTitle: crystal structure of s. mikatae ste24p
52c4gerB_



not modelled 11.8 38
PDB header:hydrolase
Chain: B: PDB Molecule:gentlyase metalloprotease;
PDBTitle: crystal structure of gentlyase, the neutral metalloprotease of2 paenibacillus polymyxa
53c2vqxA_



not modelled 11.8 25
PDB header:hydrolase
Chain: A: PDB Molecule:metalloproteinase;
PDBTitle: precursor of protealysin, metalloproteinase from serratia2 proteamaculans.
54d1c7ka_



not modelled 11.7 75
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Zinc protease
55d1cxva_



not modelled 11.6 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
56c6o38A_



not modelled 11.5 50
PDB header:sugar binding protein
Chain: A: PDB Molecule:acinetobacter secreted protease cpaa;
PDBTitle: structure of a chaperone-substrate complex
57d1k4ta2



not modelled 11.1 25
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Eukaryotic DNA topoisomerase I, catalytic core
58d2ovxa1



not modelled 10.8 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
59c4nm7B_



not modelled 10.7 22
PDB header:transferase/peptide
Chain: B: PDB Molecule:axin-1;
PDBTitle: crystal structure of gsk-3/axin complex bound to phosphorylated wnt2 receptor lrp6 e-motif
60c4nm5B_



not modelled 10.7 22
PDB header:transferase/peptide
Chain: B: PDB Molecule:axin-1;
PDBTitle: crystal structure of gsk-3/axin complex bound to phosphorylated wnt2 receptor lrp6 c-motif
61c4nu1B_



not modelled 10.7 22
PDB header:transferase/peptide
Chain: B: PDB Molecule:axin-1;
PDBTitle: crystal structure of a transition state mimic of the gsk-3/axin2 complex bound to phosphorylated n-terminal auto-inhibitory ps93 peptide
62c4nm3B_



not modelled 10.7 22
PDB header:transferase/peptide
Chain: B: PDB Molecule:axin-1;
PDBTitle: crystal structure of gsk-3/axin complex bound to phosphorylated n-2 terminal auto-inhibitory ps9 peptide
63d1v54g_



not modelled 10.6 33
Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIa
Family:Mitochondrial cytochrome c oxidase subunit VIa
64c3cz7A_



not modelled 10.5 17
PDB header:replication
Chain: A: PDB Molecule:regulator of ty1 transposition protein 109;
PDBTitle: molecular basis for the autoregulation of the protein acetyl2 transferase rtt109
65d1rm8a_



not modelled 10.4 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
66c6h9nB_



not modelled 10.2 50
PDB header:cell cycle
Chain: B: PDB Molecule:cell division protein ftsb;
PDBTitle: complex of the periplasmic domains of bacterial cell division proteins2 ftsq and ftsb
67d1y93a1



not modelled 10.1 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
68c4k90A_



not modelled 10.1 38
PDB header:hydrolase
Chain: A: PDB Molecule:extracellular metalloproteinase mep;
PDBTitle: extracellular metalloproteinase from aspergillus
69d2a3qa1



not modelled 10.1 11
Fold:all-alpha NTP pyrophosphatases
Superfamily:all-alpha NTP pyrophosphatases
Family:MazG-like
70c2q4pA_



not modelled 10.1 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein rs21-c6;
PDBTitle: ensemble refinement of the crystal structure of protein from mus2 musculus mm.29898
71c3c37B_



not modelled 10.0 50
PDB header:hydrolase
Chain: B: PDB Molecule:peptidase, m48 family;
PDBTitle: x-ray structure of the putative zn-dependent peptidase q74d82 at the2 resolution 1.7 a. northeast structural genomics consortium target3 gsr143a
72d1q3aa_



not modelled 9.9 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
73d1i76a_



not modelled 9.9 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
74c3sksA_



not modelled 9.9 50
PDB header:hydrolase
Chain: A: PDB Molecule:putative oligoendopeptidase f;
PDBTitle: crystal structure of a putative oligoendopeptidase f from bacillus2 anthracis str. ames
75d1hova_



not modelled 9.7 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
76c4aw6B_



not modelled 9.6 22
PDB header:hydrolase
Chain: B: PDB Molecule:caax prenyl protease 1 homolog;
PDBTitle: crystal structure of the human nuclear membrane zinc metalloprotease2 zmpste24 (face1)
77c2h1jA_



not modelled 9.6 44
PDB header:hydrolase
Chain: A: PDB Molecule:oligoendopeptidase f;
PDBTitle: 3.1 a x-ray structure of putative oligoendopeptidase f: crystals grown2 by microfluidic seeding
78c3q66C_



not modelled 9.6 17
PDB header:chaperone/transferase
Chain: C: PDB Molecule:histone acetyltransferase rtt109;
PDBTitle: structure of the vps75-rtt109 histone chaperone-lysine2 acetyltransferase complex (full-length proteins in space group p6122)
79c2xs4A_



not modelled 9.5 63
PDB header:hydrolase
Chain: A: PDB Molecule:karilysin protease;
PDBTitle: structure of karilysin catalytic mmp domain in complex with magnesium
80d1hy7a_



not modelled 9.4 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
81d1hfca_



not modelled 9.3 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
82c1twcF_



not modelled 9.1 25
PDB header:transcription
Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii 23
PDBTitle: rna polymerase ii complexed with gtp
83d1qiba_



not modelled 9.1 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
84d1twff_



not modelled 8.9 25
Fold:RPB6/omega subunit-like
Superfamily:RPB6/omega subunit-like
Family:RPB6
85d1mmqa_



not modelled 8.8 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
86d1cgla_



not modelled 8.8 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
87c4jiuA_



not modelled 8.7 38
PDB header:hydrolase
Chain: A: PDB Molecule:proabylysin;
PDBTitle: crystal structure of the metallopeptidase zymogen of pyrococcus abyssi2 abylysin
88c5xswA_



not modelled 8.7 19
PDB header:hydrolase
Chain: A: PDB Molecule:chitinase;
PDBTitle: crystal structure of an archaeal chitinase in the substrate-complex2 form (p63)
89c5th6D_



not modelled 8.6 63
PDB header:hydrolase/hydrolase inhibitor
Chain: D: PDB Molecule:matrix metalloproteinase-9,matrix metalloproteinase-9;
PDBTitle: structure determination of a potent, selective antibody inhibitor of2 human mmp9 (apo mmp9)
90d1fbla2



not modelled 8.6 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
91c2cltB_



not modelled 8.3 50
PDB header:hydrolase
Chain: B: PDB Molecule:interstitial collagenase;
PDBTitle: crystal structure of the active form (full-length) of human2 fibroblast collagenase.
92c3j01A_



not modelled 8.3 17
PDB header:ribosome/ribosomal protein
Chain: A: PDB Molecule:preprotein translocase secy subunit;
PDBTitle: structure of the ribosome-secye complex in the membrane environment
93c1dvaY_



not modelled 8.3 50
PDB header:hydrolase/hydrolase inhibitor
Chain: Y: PDB Molecule:peptide e-76;
PDBTitle: crystal structure of the complex between the peptide exosite inhibitor2 e-76 and coagulation factor viia
94c1dvaX_



not modelled 8.3 50
PDB header:hydrolase/hydrolase inhibitor
Chain: X: PDB Molecule:peptide e-76;
PDBTitle: crystal structure of the complex between the peptide exosite inhibitor2 e-76 and coagulation factor viia
95d1hv5a_



not modelled 8.3 63
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
96d1eaka2



not modelled 8.2 50
Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
97d1rxwa1



not modelled 8.2 23
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
98c4jixB_



not modelled 8.1 38
PDB header:hydrolase
Chain: B: PDB Molecule:projannalysin;
PDBTitle: crystal structure of the metallopeptidase zymogen of2 methanocaldococcus jannaschii jannalysin
99c3leuA_



not modelled 8.0 28
PDB header:antibacterial peptide
Chain: A: PDB Molecule:leucocin a;
PDBTitle: high resolution 1h nmr study of leucocin a in2 dodecylphosphocholine micelles, 19 structures (1:40 ratio3 of leucocin a:dpc) (0.1% tfa)

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below