Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3268_(-)_3649417_3650106
DateThu Aug 8 16:20:47 BST 2019
Unique Job ID1f311948e45e7d9d
SequenceMLRADPVGPR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.459 Y:47.852 Z:52.226
Model (left) based on template c6eqoB_
Top template information
PDB header:oxidoreductase
Chain: B: PDB Molecule:acetyl-coenzyme a synthetase;
PDBTitle: tri-functional propionyl-coa synthase of erythrobacter sp. nap1 with2 bound nadp+ and phosphomethylphosphonic acid adenylate ester
Confidence and coverage
Confidence:100.0% Coverage: 97%
223 residues ( 97% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6eqoB_
100.0 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:acetyl-coenzyme a synthetase;
PDBTitle: tri-functional propionyl-coa synthase of erythrobacter sp. nap1 with2 bound nadp+ and phosphomethylphosphonic acid adenylate ester
2c5gxdA_
100.0 13
PDB header:lyase
Chain: A: PDB Molecule:amp-dependent synthetase and ligase;
PDBTitle: structure of acryloyl-coa lyase prpe from dinoroseobacter shibae dfl2 12
3c3tsyA_
100.0 14
PDB header:ligase, transferase
Chain: A: PDB Molecule:fusion protein 4-coumarate--coa ligase 1, resveratrol
PDBTitle: 4-coumaroyl-coa ligase::stilbene synthase fusion protein
4c5u89A_
100.0 17
PDB header:hydrolase/inhibitor
Chain: A: PDB Molecule:amino acid adenylation domain protein;
PDBTitle: crystal structure of a cross-module fragment from the dimodular nrps2 dhbf
5c5es8A_
100.0 17
PDB header:ligase
Chain: A: PDB Molecule:linear gramicidin synthetase subunit a;
PDBTitle: crystal structure of the initiation module of lgra in the thiolation2 state
6c4wd1A_
100.0 17
PDB header:ligase
Chain: A: PDB Molecule:acetoacetate-coa ligase;
PDBTitle: acetoacetyl-coa synthetase from streptomyces lividans
7d1pg4a_
100.0 19
Fold:Acetyl-CoA synthetase-like
Superfamily:Acetyl-CoA synthetase-like
Family:Acetyl-CoA synthetase-like
8d1ry2a_
100.0 15
Fold:Acetyl-CoA synthetase-like
Superfamily:Acetyl-CoA synthetase-like
Family:Acetyl-CoA synthetase-like
9c5wmmA_
100.0 19
PDB header:biosynthetic protein
Chain: A: PDB Molecule:nrps;
PDBTitle: crystal structure of an adenylation domain interrupted by a2 methylation domain (ama4) from nonribosomal peptide synthetase tios
10c5mssA_
100.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioester reductase domain-containing protein;
PDBTitle: structure of the a-pcp didomain of carboxylic acid reductase (car)2 from segniliparus rugosus in complex with amp
11c6ozvA_
100.0 16
PDB header:biosynthetic protein
Chain: A: PDB Molecule:txo1;
PDBTitle: the structure of condensation and adenylation domains of teixobactin-2 producing nonribosomal peptide synthetase txo1 serine module in3 complex with amp
12c5ifiA_
100.0 18
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coenzyme a synthetase;
PDBTitle: crystal structure of acetyl-coa synthetase in complex with adenosine-2 5'-propylphosphate from cryptococcus neoformans h99
13c5ja2A_
100.0 16
PDB header:ligase
Chain: A: PDB Molecule:enterobactin synthase component f;
PDBTitle: entf, a terminal nonribosomal peptide synthetase module bound to the2 non-native mbth-like protein pa2412
14c5msdA_
100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:carboxylic acid reductase;
PDBTitle: structure of the a domain of carboxylic acid reductase (car) from2 nocardia iowensis in complex with amp and benzoic acid
15c6p1jA_
100.0 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:txo2;
PDBTitle: the structure of condensation and adenylation domains of teixobactin-2 producing nonribosomal peptide synthetase txo2 serine module
16c4gr5B_
100.0 15
PDB header:ligase
Chain: B: PDB Molecule:non-ribosomal peptide synthetase;
PDBTitle: crystal structure of slgn1deltaasub in complex with ampcpp
17c2vsqA_
100.0 17
PDB header:ligase
Chain: A: PDB Molecule:surfactin synthetase subunit 3;
PDBTitle: structure of surfactin a synthetase c (srfa-c), a nonribosomal peptide2 synthetase termination module
18c5mstA_
100.0 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioester reductase domain-containing protein;
PDBTitle: structure of the a domain of carboxylic acid reductase (car) from2 segniliparus rugosus in complex with amp and a co-purified carboxylic3 acid
19c6n8eA_
100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:holo-obif1;
PDBTitle: crystal structure of holo-obif1, a five domain nonribosomal peptide2 synthetase from burkholderia diffusa
20c4zxjA_
100.0 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:enterobactin synthase component f;
PDBTitle: crystal structure of holo-entf a nonribosomal peptide synthetase in2 the thioester-forming conformation
21c4lgcA_
not modelled 100.0 13
PDB header:ligase
Chain: A: PDB Molecule:bile acid-coenzyme a ligase;
PDBTitle: crystal structure of a bile acid-coenzyme a ligase (baib) from2 clostridium scindens (vpi 12708) at 2.19 a resolution
22c3etcB_
not modelled 100.0 12
PDB header:ligase
Chain: B: PDB Molecule:amp-binding protein;
PDBTitle: 2.1 a structure of acyl-adenylate synthetase from methanosarcina2 acetivorans containing a link between lys256 and cys298
23c3gqwB_
not modelled 100.0 14
PDB header:ligase
Chain: B: PDB Molecule:fatty acid amp ligase;
PDBTitle: crystal structure of a fatty acid amp ligase from e. coli with an acyl2 adenylate product bound
24c4r0mB_
not modelled 100.0 10
PDB header:ligase
Chain: B: PDB Molecule:mcyg protein;
PDBTitle: structure of mcyg a-pcp complexed with phenylalanyl-adenylate
25c3g7sA_
not modelled 100.0 10
PDB header:ligase
Chain: A: PDB Molecule:long-chain-fatty-acid--coa ligase (fadd-1);
PDBTitle: crystal structure of a long-chain-fatty-acid-coa ligase2 (fadd1) from archaeoglobus fulgidus
26c3kxwA_
not modelled 100.0 14
PDB header:ligase
Chain: A: PDB Molecule:saframycin mx1 synthetase b;
PDBTitle: the crystal structure of fatty acid amp ligase from legionella2 pneumophila
27c5x8gA_
not modelled 100.0 13
PDB header:ligase
Chain: A: PDB Molecule:2-succinylbenzoate--coa ligase;
PDBTitle: binary complex structure of a double mutant i454ra456k of o-2 succinylbenzoate coa synthetase (mene) from bacillus subtilis bound3 with its product analogue osb-ncoa at 1.90 angstrom
28c4r0mA_
not modelled 100.0 10
PDB header:ligase
Chain: A: PDB Molecule:mcyg protein;
PDBTitle: structure of mcyg a-pcp complexed with phenylalanyl-adenylate
29c4dg9A_
not modelled 100.0 13
PDB header:ligase/inhibitor
Chain: A: PDB Molecule:pa1221;
PDBTitle: structure of holo-pa1221, an nrps protein containing adenylation and2 pcp domains bound to vinylsulfonamide inhibitor
30c4zxiA_
not modelled 100.0 14
PDB header:biosynthetic protein
Chain: A: PDB Molecule:tyrocidine synthetase 3;
PDBTitle: crystal structure of holo-ab3403 a four domain nonribosomal peptide2 synthetase bound to amp and glycine
31d1v25a_
not modelled 100.0 16
Fold:Acetyl-CoA synthetase-like
Superfamily:Acetyl-CoA synthetase-like
Family:Acetyl-CoA synthetase-like
32c3vnqA_
not modelled 100.0 14
PDB header:ligase
Chain: A: PDB Molecule:nrps adenylation protein cytc1;
PDBTitle: co-crystal structure of nrps adenylation protein cytc1 with atp from2 streptomyces
33d3cw9a1
not modelled 100.0 15
Fold:Acetyl-CoA synthetase-like
Superfamily:Acetyl-CoA synthetase-like
Family:Acetyl-CoA synthetase-like
34c3iteB_
not modelled 100.0 12
PDB header:ligase
Chain: B: PDB Molecule:sidn siderophore synthetase;
PDBTitle: the third adenylation domain of the fungal sidn non-ribosomal peptide2 synthetase
35c4wv3A_
not modelled 100.0 15
PDB header:ligase/ligase inhibitor
Chain: A: PDB Molecule:anthranilate-coa ligase;
PDBTitle: crystal structure of the anthranilate coa ligase auaeii in complex2 with anthranoyl-amp
36c4w8oA_
not modelled 100.0 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:luciferase-like enzymeamp-coa-ligase;
PDBTitle: structure of the luciferase-like enzyme from the nonluminescent2 zophobas morio mealworm
37c3e7wA_
not modelled 100.0 12
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--poly(phosphoribitol) ligase subunit 1;
PDBTitle: crystal structure of dlta: implications for the reaction mechanism of2 non-ribosomal peptide synthetase (nrps) adenylation domains
38d1mdba_
not modelled 100.0 19
Fold:Acetyl-CoA synthetase-like
Superfamily:Acetyl-CoA synthetase-like
Family:Acetyl-CoA synthetase-like
39c5ey8D_
not modelled 100.0 16
PDB header:ligase
Chain: D: PDB Molecule:acyl-coa synthase;
PDBTitle: structure of fadd32 from mycobacterium smegmatis complexed to ampc20
40c4dg8A_
not modelled 100.0 14
PDB header:ligase
Chain: A: PDB Molecule:pa1221;
PDBTitle: structure of pa1221, an nrps protein containing adenylation and pcp2 domains
41c3eynB_
not modelled 100.0 15
PDB header:ligase
Chain: B: PDB Molecule:acyl-coenzyme a synthetase acsm2a;
PDBTitle: crystal structure of human acyl-coa synthetase medium-chain2 family member 2a (l64p mutation) in a complex with coa
42c3ni2A_
not modelled 100.0 12
PDB header:ligase
Chain: A: PDB Molecule:4-coumarate:coa ligase;
PDBTitle: crystal structures and enzymatic mechanisms of a populus tomentosa 4-2 coumarate:coa ligase
43c2v7bB_
not modelled 100.0 13
PDB header:ligase
Chain: B: PDB Molecule:benzoate-coenzyme a ligase;
PDBTitle: crystal structures of a benzoate coa ligase from2 burkholderia xenovorans lb400
44c2d1tA_
not modelled 100.0 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:luciferin 4-monooxygenase;
PDBTitle: crystal structure of the thermostable japanese firefly2 luciferase red-color emission s286n mutant complexed with3 high-energy intermediate analogue
45c5ie2A_
not modelled 100.0 13
PDB header:ligase
Chain: A: PDB Molecule:oxalate--coa ligase;
PDBTitle: crystal structure of a plant enzyme
46c3qyaA_
not modelled 100.0 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:luciferase;
PDBTitle: crystal structure of a red-emitter mutant of lampyris turkestanicus2 luciferase
47c6ac3B_
not modelled 100.0 12
PDB header:luminescent protein
Chain: B: PDB Molecule:red-bioluminescence eliciting luciferase;
PDBTitle: structure of a natural red emitting luciferase from phrixothrix hirtus2 (p3121 crystal form)
48c6abhG_
not modelled 100.0 11
PDB header:luminescent protein
Chain: G: PDB Molecule:red-bioluminescence eliciting luciferase;
PDBTitle: structure of a natural red emitting luciferase from phrixothrix hirtus2 (p1 crystal form)
49c5jjpB_
not modelled 100.0 20
PDB header:ligase
Chain: B: PDB Molecule:nonribosomal peptide synthase;
PDBTitle: crystal structure of cmis6
50c4ir7A_
not modelled 100.0 15
PDB header:transferase
Chain: A: PDB Molecule:long chain fatty acid coa ligase fadd10;
PDBTitle: crystal structure of mtb fadd10 in complex with dodecanoyl-amp
51c6ijbA_
not modelled 100.0 13
PDB header:ligase
Chain: A: PDB Molecule:amp-binding domain protein;
PDBTitle: structure of 3-methylmercaptopropionate coa ligase mutant k523a in2 complex with amp and mmpa
52c5c5hA_
not modelled 100.0 10
PDB header:ligase
Chain: A: PDB Molecule:2-succinylbenzoate--coa ligase;
PDBTitle: r195k e. coli mene with bound osb-ams
53c3e53A_
not modelled 100.0 15
PDB header:ligase
Chain: A: PDB Molecule:fatty-acid-coa ligase fadd28;
PDBTitle: crystal structure of n-terminal domain of a fatty acyl amp2 ligase faal28 from mycobacterium tuberculosis
54c1amuB_
not modelled 100.0 13
PDB header:peptide synthetase
Chain: B: PDB Molecule:gramicidin synthetase 1;
PDBTitle: phenylalanine activating domain of gramicidin synthetase 12 in a complex with amp and phenylalanine
55c3nyrA_
not modelled 100.0 17
PDB header:ligase
Chain: A: PDB Molecule:malonyl-coa ligase;
PDBTitle: malonyl-coa ligase ternary product complex with malonyl-coa and amp2 bound
56c5wm7A_
not modelled 100.0 19
PDB header:ligase
Chain: A: PDB Molecule:salicylate-amp ligase;
PDBTitle: crystal structure of cahj in complex with amp
57c5n81B_
not modelled 100.0 15
PDB header:ligase
Chain: B: PDB Molecule:tyrocidine synthase 1;
PDBTitle: crystal structure of an engineered tyca variant in complex with an o-2 propargyl-beta-tyr-amp analog
58c5aplA_
not modelled 100.0 19
PDB header:transferase
Chain: A: PDB Molecule:adenylation domain;
PDBTitle: structure of the adenylation domain thr1 involved in the biosynthesis2 of 4-chlorothreonine in streptomyces sp. oh-5093, apo structure
59c3rg2H_
not modelled 100.0 17
PDB header:ligase
Chain: H: PDB Molecule:enterobactin synthase component e (ente), 2,3-dihydro-2,3-
PDBTitle: structure of a two-domain nrps fusion protein containing the ente2 adenylation domain and entb aryl-carrier protein from enterobactin3 biosynthesis
60c5e7qB_
not modelled 99.9 11
PDB header:transferase
Chain: B: PDB Molecule:acyl-coa synthetase;
PDBTitle: acyl-coa synthetase ptma2 from streptomyces platensis
61c3o82B_
not modelled 99.9 19
PDB header:ligase
Chain: B: PDB Molecule:peptide arylation enzyme;
PDBTitle: structure of base n-terminal domain from acinetobacter baumannii bound2 to 5'-o-[n-(2,3-dihydroxybenzoyl)sulfamoyl] adenosine
62c6h1bA_
not modelled 99.9 17
PDB header:ligase
Chain: A: PDB Molecule:fatty acid coa ligase;
PDBTitle: structure of amide bond synthetase mcba k483a mutant from2 marinactinospora thermotolerans
63c4fuqD_
not modelled 99.9 13
PDB header:ligase
Chain: D: PDB Molecule:malonyl coa synthetase;
PDBTitle: crystal structure of apo matb from rhodopseudomonas palustris
64c5buqA_
not modelled 99.9 12
PDB header:ligase
Chain: A: PDB Molecule:2-succinylbenzoate--coa ligase;
PDBTitle: unliganded form of o-succinylbenzoate coenzyme a synthetase (mene)2 from bacillus subtilis, solved at 1.98 angstroms
65c3iplB_
not modelled 99.9 12
PDB header:ligase
Chain: B: PDB Molecule:2-succinylbenzoate--coa ligase;
PDBTitle: crystal structure of o-succinylbenzoic acid-coa ligase from2 staphylococcus aureus subsp. aureus mu50
66c5burB_
not modelled 99.9 13
PDB header:ligase
Chain: B: PDB Molecule:2-succinylbenzoate--coa ligase;
PDBTitle: o-succinylbenzoate coenzyme a synthetase (mene) from bacillus2 subtilis, in complex with atp and magnesium ion
67c3r44A_
not modelled 99.9 16
PDB header:ligase
Chain: A: PDB Molecule:fatty acyl coa synthetase fadd13 (fatty-acyl-coa
PDBTitle: mycobacterium tuberculosis fatty acyl coa synthetase
68c3o82A_
not modelled 99.9 18
PDB header:ligase
Chain: A: PDB Molecule:peptide arylation enzyme;
PDBTitle: structure of base n-terminal domain from acinetobacter baumannii bound2 to 5'-o-[n-(2,3-dihydroxybenzoyl)sulfamoyl] adenosine
69c3wv4B_
not modelled 99.9 15
PDB header:ligase
Chain: B: PDB Molecule:non-ribosomal peptide synthetase;
PDBTitle: crystal structure of vinn
70d1amua_
not modelled 99.9 13
Fold:Acetyl-CoA synthetase-like
Superfamily:Acetyl-CoA synthetase-like
Family:Acetyl-CoA synthetase-like
71c6akdA_
not modelled 99.9 19
PDB header:ligase
Chain: A: PDB Molecule:amp-dependent synthetase and ligase;
PDBTitle: crystal structure of idnl7
72c3ivrA_
not modelled 99.9 21
PDB header:ligase
Chain: A: PDB Molecule:putative long-chain-fatty-acid coa ligase;
PDBTitle: crystal structure of putative long-chain-fatty-acid coa ligase from2 rhodopseudomonas palustris cga009
73c3l8cA_
not modelled 99.9 11
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--poly(phosphoribitol) ligase subunit 1;
PDBTitle: structure of probable d-alanine--poly(phosphoribitol) ligase subunit-12 from streptococcus pyogenes
74c4d56A_
not modelled 99.9 12
PDB header:hydrolase
Chain: A: PDB Molecule:apnaa1;
PDBTitle: understanding bi-specificity of a-domains
75c5keiA_
not modelled 99.9 20
PDB header:ligase
Chain: A: PDB Molecule:2,3-dihydroxybenzoate-amp ligase;
PDBTitle: mycobacterium smegmatis mbta apo structure
76c5jjpC_
not modelled 99.9 20
PDB header:ligase
Chain: C: PDB Molecule:nonribosomal peptide synthase;
PDBTitle: crystal structure of cmis6
77c4eatB_
not modelled 99.9 12
PDB header:ligase
Chain: B: PDB Molecule:benzoate-coenzyme a ligase;
PDBTitle: crystal structure of a benzoate coenzyme a ligase
78c5u2aA_
not modelled 99.9 15
PDB header:ligase
Chain: A: PDB Molecule:amp-dependent synthetase and ligase;
PDBTitle: crystal structure of brucella canis acyl-coa synthetase
79c3t5cA_
not modelled 99.9 16
PDB header:ligase
Chain: A: PDB Molecule:probable chain-fatty-acid-coa ligase fadd13;
PDBTitle: crystal structure of n-terminal domain of facl13 from mycobacterium2 tuberculosis in different space group c2
80c4oxiA_
not modelled 99.9 14
PDB header:ligase
Chain: A: PDB Molecule:enterobactin synthetase component f-related protein;
PDBTitle: crystal structure of vibrio cholerae adenylation domain alme in2 complex with glycyl-adenosine-5'-phosphate
81c5oe3C_
not modelled 99.9 16
PDB header:ligase
Chain: C: PDB Molecule:anthranilate--coa ligase;
PDBTitle: crystal structure of the n-terminal domain of pqsa in complex with2 anthraniloyl-amp (crystal form 1)
82c5jjqB_
not modelled 99.9 20
PDB header:ligase
Chain: B: PDB Molecule:amp-dependent synthetase and ligase;
PDBTitle: crystal structure of idnl1
83d1lcia_
not modelled 99.9 10
Fold:Acetyl-CoA synthetase-like
Superfamily:Acetyl-CoA synthetase-like
Family:Acetyl-CoA synthetase-like
84c3dhvA_
not modelled 99.9 9
PDB header:ligase
Chain: A: PDB Molecule:d-alanine-poly(phosphoribitol) ligase;
PDBTitle: crystal structure of dlta protein in complex with d-alanine2 adenylate
85c4gs5A_
not modelled 99.6 12
PDB header:ligase
Chain: A: PDB Molecule:acyl-coa synthetase (amp-forming)/amp-acid ligase ii-like
PDBTitle: the crystal structure of acyl-coa synthetase (amp-forming)/amp-acid2 ligase ii-like protein from dyadobacter fermentans dsm 18053
86c2y4oA_
not modelled 99.5 9
PDB header:ligase
Chain: A: PDB Molecule:phenylacetate-coenzyme a ligase;
PDBTitle: crystal structure of paak2 in complex with phenylacetyl adenylate
87c2y27B_
not modelled 99.5 11
PDB header:ligase
Chain: B: PDB Molecule:phenylacetate-coenzyme a ligase;
PDBTitle: crystal structure of paak1 in complex with atp from burkholderia2 cenocepacia
88c3hguB_
not modelled 99.2 7
PDB header:biosynthetic protein
Chain: B: PDB Molecule:ehpf;
PDBTitle: structure of phenazine antibiotic biosynthesis protein
89c3qovD_
not modelled 99.2 13
PDB header:ligase
Chain: D: PDB Molecule:phenylacetate-coenzyme a ligase;
PDBTitle: crystal structure of a hypothetical acyl-coa ligase (bt_0428) from2 bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution
90c4eplA_
not modelled 77.2 10
PDB header:ligase
Chain: A: PDB Molecule:jasmonic acid-amido synthetase jar1;
PDBTitle: crystal structure of arabidopsis thaliana gh3.11 (jar1) in complex2 with ja-ile
91c5kodA_
not modelled 71.2 9
PDB header:ligase
Chain: A: PDB Molecule:indole-3-acetic acid-amido synthetase gh3.5;
PDBTitle: crystal structure of gh3.5 acyl acid amido synthetase from arabidopsis2 thaliana
92d2ayia1
not modelled 67.2 16
Fold:Thermophilic metalloprotease-like
Superfamily:Thermophilic metalloprotease-like
Family:Thermophilic metalloprotease (M29)
93c4b2gB_
not modelled 66.8 10
PDB header:signaling protein
Chain: B: PDB Molecule:gh3-1 auxin conjugating enzyme;
PDBTitle: crystal structure of an indole-3-acetic acid amido synthase from vitis2 vinifera involved in auxin homeostasis
94c6mb6A_
not modelled 64.4 9
PDB header:transferase
Chain: A: PDB Molecule:aac(3)-iiib protein;
PDBTitle: aac-iiib binary with coash
95c3e4fB_
not modelled 64.3 23
PDB header:transferase
Chain: B: PDB Molecule:aminoglycoside n3-acetyltransferase;
PDBTitle: crystal structure of ba2930- a putative aminoglycoside n3-2 acetyltransferase from bacillus anthracis
96c5ht0B_
not modelled 62.7 14
PDB header:transferase
Chain: B: PDB Molecule:aminoglycoside acetyltransferase hmb0005;
PDBTitle: crystal structure of an antibiotic_nat family aminoglycoside2 acetyltransferase hmb0038 from an uncultured soil metagenomic sample3 in complex with coenzyme a
97c6bc3A_
not modelled 62.3 23
PDB header:transferase/antibiotic
Chain: A: PDB Molecule:aac 3-vi protein;
PDBTitle: cryo x-ray structure of sisomicin bound aac-via
98c3smaD_
not modelled 61.8 14
PDB header:transferase
Chain: D: PDB Molecule:frbf;
PDBTitle: a new n-acetyltransferase fold in the structure and mechanism of the2 phosphonate biosynthetic enzyme frbf
99c6mn5A_
not modelled 61.2 18
PDB header:transferase/antibiotic
Chain: A: PDB Molecule:aminoglycoside n(3)-acetyltransferase, aac(3)-iva;
PDBTitle: crystal structure of aminoglycoside acetyltransferase aac(3)-iva,2 h154a mutant, in complex with gentamicin c1a
100d2nyga1
not modelled 60.7 14
Fold:TTHA0583/YokD-like
Superfamily:TTHA0583/YokD-like
Family:Aminoglycoside 3-N-acetyltransferase-like
101c4z1oB_
not modelled 58.5 20
PDB header:transferase
Chain: B: PDB Molecule:phosphoribosyltransferase;
PDBTitle: hypoxanthine-guanine-xanthine phosphoribosyltransferase (hgxprt) from2 sulfolobus solfataricus in complex with alpha-3 phosphoribosylpyrophosphoric acid (prpp) and magnesium
102d1e3ia2
not modelled 57.1 11
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
103d1p0fa2
not modelled 56.9 11
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
104d1d1ta2
not modelled 53.6 10
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
105d1u3wa2
not modelled 51.2 15
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
106d1piwa2
not modelled 48.1 13
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
107d2jhfa2
not modelled 47.1 11
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
108d1pl8a2
not modelled 46.5 11
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
109d2fzwa2
not modelled 45.2 13
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
110d1kola2
not modelled 43.1 17
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
111c4icqB_
not modelled 40.8 14
PDB header:hydrolase
Chain: B: PDB Molecule:aminopeptidase peps;
PDBTitle: structural basis for substrate recognition and reaction mechanism of2 bacterial aminopeptidase peps
112c2glwA_
not modelled 40.8 35
PDB header:transcription
Chain: A: PDB Molecule:92aa long hypothetical protein;
PDBTitle: the solution structure of phs018 from pyrococcus horikoshii
113d1cdoa2
not modelled 39.7 16
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
114c5vogA_
not modelled 38.6 11
PDB header:transferase
Chain: A: PDB Molecule:putative phosphoribosyltransferase;
PDBTitle: crystal structure of a hypothetical protein from neisseria gonorrhoeae2 with bound ppgpp
115c4k2bA_
not modelled 37.2 20
PDB header:transferase
Chain: A: PDB Molecule:ntd biosynthesis operon protein ntda;
PDBTitle: crystal structure of ntda from bacillus subtilis in complex with the2 internal aldimine
116d1zjca1
not modelled 36.9 16
Fold:Thermophilic metalloprotease-like
Superfamily:Thermophilic metalloprotease-like
Family:Thermophilic metalloprotease (M29)
117d1ykfa2
not modelled 36.6 10
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
118d1e3ja2
not modelled 36.6 12
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
119d1f8fa2
not modelled 32.9 17
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain
120d1llua2
not modelled 32.7 23
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Alcohol dehydrogenase-like, C-terminal domain

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below