Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3277_(-)_3659875_3660693
DateThu Aug 8 16:20:48 BST 2019
Unique Job ID227a452766d31e6a
SequenceMNEVTAGVRE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:49.446 Y:49.511 Z:29.050
Model (left) based on template c5mm1A_
Top template information
PDB header:membrane protein
Chain: A: PDB Molecule:dolichol monophosphate mannose synthase;
PDBTitle: dolichyl phosphate mannose synthase in complex with gdp and dolichyl2 phosphate mannose
Confidence and coverage
Confidence: 98.7% Coverage: 48%
131 residues ( 48% of your sequence) have been modelled with 98.7% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5mm1A_



98.7 18
PDB header:membrane protein
Chain: A: PDB Molecule:dolichol monophosphate mannose synthase;
PDBTitle: dolichyl phosphate mannose synthase in complex with gdp and dolichyl2 phosphate mannose
2c4px7A_



85.1 22
PDB header:hydrolase
Chain: A: PDB Molecule:phosphatidylglycerophosphatase;
PDBTitle: crystal structure of lipid phosphatase e. coli pgpb
3c5khnB_



26.9 7
PDB header:membrane protein
Chain: B: PDB Molecule:rnd transporter;
PDBTitle: crystal structures of the burkholderia multivorans hopanoid2 transporter hpnn
4c6ebuA_



26.4 14
PDB header:hydrolase
Chain: A: PDB Molecule:lpxe;
PDBTitle: crystal structure of aquifex aeolicus lpxe
5c4rfsS_



24.4 18
PDB header:hydrolase, transport protein
Chain: S: PDB Molecule:substrate binding pritein s;
PDBTitle: structure of a pantothenate energy coupling factor transporter
6c4zigB_



22.5 62
PDB header:apoptosis
Chain: B: PDB Molecule:bh3-interacting domain death agonist;
PDBTitle: crystal structure of core/latch dimer of bax in complex with2 bidbh3mini
7c6ajjA_



16.9 16
PDB header:membrane protein, hydrolase
Chain: A: PDB Molecule:drug exporters of the rnd superfamily-like protein,
PDBTitle: crystal structure of mycolic acid transporter mmpl3 from mycobacterium2 smegmatis complexed with ica38
8c4mt1A_



15.6 13
PDB header:membrane protein, tranport protein
Chain: A: PDB Molecule:drug efflux protein;
PDBTitle: crystal structure of the neisseria gonorrhoeae mtrd inner membrane2 multidrug efflux pump
9c5c0vA_



15.5 63
PDB header:rna binding protein
Chain: A: PDB Molecule:la-related protein 1;
PDBTitle: structure of the larp1-unique domain dm15
10c4akrC_



14.3 88
PDB header:actin-binding protein
Chain: C: PDB Molecule:f-actin-capping protein subunit alpha;
PDBTitle: crystal structure of the cytoplasmic actin capping protein2 cap32_34 from dictyostelium discoideum
11d1izna_



14.1 75
Fold:Subunits of heterodimeric actin filament capping protein Capz
Superfamily:Subunits of heterodimeric actin filament capping protein Capz
Family:Capz alpha-1 subunit
12c1zy3B_



12.6 54
PDB header:apoptosis
Chain: B: PDB Molecule:bh3-peptide from bh3 interacting domain death
PDBTitle: structural model of complex of bcl-w protein with bid bh3-2 peptide
13c6ithA_



12.4 26
PDB header:membrane protein
Chain: A: PDB Molecule:syndecan-2;
PDBTitle: structure of the transmembrane domain of syndecan 2 in micelles
14c4z38B_



11.9 25
PDB header:transferase
Chain: B: PDB Molecule:mlna;
PDBTitle: crystal structure of enoyl reductase domain of mlna from the2 macrolactin biosynthesis cluster from bacillus amyloliquefaciens
15c6k1hE_



11.5 22
PDB header:protein transport
Chain: E: PDB Molecule:pts mannose/fructose/sorbose transporter subunit iic;
PDBTitle: structure of membrane protein
16c2gv5C_



11.2 75
PDB header:cell cycle
Chain: C: PDB Molecule:sfi1p;
PDBTitle: crystal structure of sfi1p/cdc31p complex
17d1wpga4



11.1 14
Fold:Calcium ATPase, transmembrane domain M
Superfamily:Calcium ATPase, transmembrane domain M
Family:Calcium ATPase, transmembrane domain M
18c6fosK_



10.7 24
PDB header:photosynthesis
Chain: K: PDB Molecule:photosystem i reaction center subunit x;
PDBTitle: cyanidioschyzon merolae photosystem i
19c5hk1A_



10.0 20
PDB header:membrane protein
Chain: A: PDB Molecule:sigma non-opioid intracellular receptor 1;
PDBTitle: human sigma-1 receptor bound to pd144418
20c2rdcA_



9.9 30
PDB header:lipid binding protein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative lipid binding protein (gsu0061) from2 geobacter sulfurreducens pca at 1.80 a resolution
21d1rhzb_



not modelled 9.3 20
Fold:Single transmembrane helix
Superfamily:Preprotein translocase SecE subunit
Family:Preprotein translocase SecE subunit
22d1i17a_



not modelled 9.1 46
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
23c1pznG_



not modelled 9.1 26
PDB header:recombination
Chain: G: PDB Molecule:dna repair and recombination protein rad51;
PDBTitle: rad51 (rada)
24d1ijwc_



not modelled 9.0 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Recombinase DNA-binding domain
25d1gxua_



not modelled 8.9 22
Fold:Ferredoxin-like
Superfamily:Acylphosphatase/BLUF domain-like
Family:Acylphosphatase-like
26d1lg4a_



not modelled 8.4 38
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
27d1pzna2



not modelled 8.4 26
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
28c2fv2A_



not modelled 8.3 19
PDB header:transcription
Chain: A: PDB Molecule:rcd1 required for cell differentiation1 homolog;
PDBTitle: crystal structure analysis of human rcd-1 conserved region
29c2p64B_



not modelled 8.3 27
PDB header:ligase
Chain: B: PDB Molecule:f-box/wd repeat protein 1a;
PDBTitle: d domain of b-trcp
30d1w2ia_



not modelled 8.2 22
Fold:Ferredoxin-like
Superfamily:Acylphosphatase/BLUF domain-like
Family:Acylphosphatase-like
31d1z01a2



not modelled 7.9 17
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
32c2dflA_



not modelled 7.9 26
PDB header:recombination
Chain: A: PDB Molecule:dna repair and recombination protein rada;
PDBTitle: crystal structure of left-handed rada filament
33c3ouxB_



not modelled 7.8 23
PDB header:protein binding
Chain: B: PDB Molecule:lymphoid enhancer-binding factor 1;
PDBTitle: structure of beta-catenin with phosphorylated lef-1
34d3d31c1



not modelled 7.3 14
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
35c3d31D_



not modelled 7.3 14
PDB header:transport protein
Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease protein;
PDBTitle: modbc from methanosarcina acetivorans
36d1v5wa_



not modelled 7.2 32
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
37c5id3C_



not modelled 7.1 10
PDB header:transport protein
Chain: C: PDB Molecule:mitochondrial calcium uniporter;
PDBTitle: solution structure of the pore-forming region of c. elegans2 mitochondrial calcium uniporter (mcu)
38c2r6gF_



not modelled 7.1 11
PDB header:hydrolase/transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: the crystal structure of the e. coli maltose transporter
39c4b19A_



not modelled 6.9 38
PDB header:toxin
Chain: A: PDB Molecule:pepa1;
PDBTitle: s. aureus pepa1 nmr structure
40c4k0eC_



not modelled 6.9 11
PDB header:transport protein
Chain: C: PDB Molecule:heavy metal cation tricomponent efflux pump znea(czca-
PDBTitle: x-ray crystal structure of a heavy metal efflux pump, crystal form ii
41d1hcra_



not modelled 6.9 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Recombinase DNA-binding domain
42c3br8A_



not modelled 6.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:probable acylphosphatase;
PDBTitle: crystal structure of acylphosphatase from bacillus subtilis
43c2r3bA_



not modelled 6.5 23
PDB header:transferase
Chain: A: PDB Molecule:yjef-related protein;
PDBTitle: crystal structure of a ribokinase-like superfamily protein (ef1790)2 from enterococcus faecalis v583 at 1.80 a resolution
44c5xpdA_



not modelled 6.4 17
PDB header:transport protein
Chain: A: PDB Molecule:sugar transporter;
PDBTitle: sugar transporter of atsweet13 in inward-facing state with a substrate2 analog
45c5lnko_



not modelled 6.4 9
PDB header:oxidoreductase
Chain: O: PDB Molecule:
PDBTitle: entire ovine respiratory complex i
46c2gv1A_



not modelled 6.3 29
PDB header:hydrolase
Chain: A: PDB Molecule:probable acylphosphatase;
PDBTitle: nmr solution structure of the acylphosphatase from2 eschaerichia coli
47d2icha1



not modelled 6.3 28
Fold:AttH-like
Superfamily:AttH-like
Family:AttH-like
48c5ecfJ_



not modelled 6.3 10
PDB header:lipid binding protein
Chain: J: PDB Molecule:cell wall antigen;
PDBTitle: ligand binding domain 1 of penicillium marneffei mp1 protein complexed2 with arachidonic acids
49c5a96A_



not modelled 6.3 50
PDB header:viral protein
Chain: A: PDB Molecule:polyhedrin;
PDBTitle: crystal structure of lymantria dispar cpv14 polyhedra
50c1szpC_



not modelled 6.2 37
PDB header:dna binding protein
Chain: C: PDB Molecule:dna repair protein rad51;
PDBTitle: a crystal structure of the rad51 filament
51c2oucB_



not modelled 6.2 30
PDB header:hydrolase
Chain: B: PDB Molecule:dual specificity protein phosphatase 10;
PDBTitle: crystal structure of the map kinase binding domain of mkp5
52c6cc4A_



not modelled 6.1 14
PDB header:transport protein
Chain: A: PDB Molecule:soluble cytochrome b562, lipid ii flippase murj chimera;
PDBTitle: structure of murj from escherichia coli
53d1ulra_



not modelled 6.0 21
Fold:Ferredoxin-like
Superfamily:Acylphosphatase/BLUF domain-like
Family:Acylphosphatase-like
54d2acya_



not modelled 6.0 17
Fold:Ferredoxin-like
Superfamily:Acylphosphatase/BLUF domain-like
Family:Acylphosphatase-like
55d1szpa2



not modelled 5.9 37
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
56d2pfxa1



not modelled 5.8 17
Fold:AhpD-like
Superfamily:AhpD-like
Family:Atu0492-like
57d1apsa_



not modelled 5.7 13
Fold:Ferredoxin-like
Superfamily:Acylphosphatase/BLUF domain-like
Family:Acylphosphatase-like
58c2kl4A_



not modelled 5.7 0
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:bh2032 protein;
PDBTitle: nmr structure of the protein nb7804a
59c6j9nB_



not modelled 5.5 25
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:acriic3;
PDBTitle: nmehnh+acriic3
60c3l8jA_



not modelled 5.5 25
PDB header:protein binding
Chain: A: PDB Molecule:programmed cell death protein 10;
PDBTitle: crystal structure of ccm3, a cerebral cavernous malformation protein2 critical for vascular integrity
61c2n5lA_



not modelled 5.4 21
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease zc3h12a;
PDBTitle: regnase-1 c-terminal domain
62d1uj8a1



not modelled 5.4 27
Fold:Another 3-helical bundle
Superfamily:IscX-like
Family:IscX-like
63c2wwbB_



not modelled 5.4 38
PDB header:ribosome
Chain: B: PDB Molecule:protein transport protein sec61 subunit gamma;
PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the actively2 translating wheat germ 80s ribosome
64c6ijoL_



not modelled 5.3 12
PDB header:photosynthesis
Chain: L: PDB Molecule:psal;
PDBTitle: photosystem i of chlamydomonas reinhardtii
65c3jbrE_



not modelled 5.3 17
PDB header:membrane protein
Chain: E: PDB Molecule:voltage-dependent calcium channel gamma-1 subunit;
PDBTitle: cryo-em structure of the rabbit voltage-gated calcium channel cav1.12 complex at 4.2 angstrom
66c4cw5B_



not modelled 5.1 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:dfna;
PDBTitle: crystal structure of the enoyl reductase domain of dfna2 from bacillus amyloliquefaciens

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below