Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3279c_(birA)_3661209_3662009
DateThu Aug 8 16:20:48 BST 2019
Unique Job ID47ce4bf993f889df
SequenceVTDRDRLRPP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:43.809 Y:41.464 Z:58.968
Model (left) based on template c2ewnA_
Top template information
PDB header:ligase, transcription
Chain: A: PDB Molecule:bira bifunctional protein;
PDBTitle: ecoli biotin repressor with co-repressor analog
Confidence and coverage
Confidence:100.0% Coverage: 91%
243 residues ( 91% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2ewnA_
100.0 33
PDB header:ligase, transcription
Chain: A: PDB Molecule:bira bifunctional protein;
PDBTitle: ecoli biotin repressor with co-repressor analog
2c2cghB_
100.0 100
PDB header:ligase
Chain: B: PDB Molecule:biotin ligase;
PDBTitle: crystal structure of biotin ligase from mycobacterium tuberculosis
3c2ej9A_
100.0 25
PDB header:ligase
Chain: A: PDB Molecule:putative biotin ligase;
PDBTitle: crystal structure of biotin protein ligase from2 methanococcus jannaschii
4c3rkxA_
100.0 23
PDB header:ligase
Chain: A: PDB Molecule:biotin-[acetyl-coa-carboxylase] ligase;
PDBTitle: structural characterisation of staphylococcus aureus biotin protein2 ligase
5c2eayB_
100.0 24
PDB header:ligase
Chain: B: PDB Molecule:biotin [acetyl-coa-carboxylase] ligase;
PDBTitle: crystal structure of biotin protein ligase from aquifex2 aeolicus
6c3bfmA_
100.0 15
PDB header:unknown function
Chain: A: PDB Molecule:biotin protein ligase-like protein of unknown function;
PDBTitle: crystal structure of a biotin protein ligase-like protein of unknown2 function (tm1040_0394) from silicibacter sp. tm1040 at 1.70 a3 resolution
7c2dzcA_
100.0 28
PDB header:ligase
Chain: A: PDB Molecule:biotin--[acetyl-coa-carboxylase] ligase;
PDBTitle: crystal structure of biotin protein ligase from pyrococcus2 horikoshii, mutation r48a
8d2zgwa2
100.0 23
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Biotin holoenzyme synthetase
9c6ck0A_
100.0 23
PDB header:ligase
Chain: A: PDB Molecule:biotin acetyl coenzyme a carboxylase synthetase;
PDBTitle: crystal structure of biotin acetyl coenzyme a carboxylase synthetase2 from helicobacter pylori with bound biotinylated atp
10d1biaa3
100.0 32
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Biotin holoenzyme synthetase
11c2qhvA_
98.8 16
PDB header:transferase
Chain: A: PDB Molecule:lipoyltransferase;
PDBTitle: structural basis of octanoic acid recognition by lipoate-protein2 ligase b
12c2qhsA_
98.8 16
PDB header:transferase
Chain: A: PDB Molecule:lipoyltransferase;
PDBTitle: structural basis of octanoic acid recognition by lipoate-protein2 ligase b
13d1biaa2
98.7 34
Fold:SH3-like barrel
Superfamily:C-terminal domain of transcriptional repressors
Family:Biotin repressor (BirA)
14d1w66a1
98.6 16
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
15c1vqzA_
98.1 12
PDB header:ligase
Chain: A: PDB Molecule:lipoate-protein ligase, putative;
PDBTitle: crystal structure of a putative lipoate-protein ligase a (sp_1160)2 from streptococcus pneumoniae tigr4 at 1.99 a resolution
16d2p0la1
98.0 19
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
17d1vqza2
98.0 14
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
18c3r07A_
97.9 16
PDB header:transferase
Chain: A: PDB Molecule:lipoate-protein ligase a subunit 1;
PDBTitle: structural analysis of an archaeal lipoylation system. a bi-partite2 lipoate protein ligase and its e2 lipoyl domain from thermoplasma3 acidophilum
19d2c8ma1
97.8 16
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
20d1x2ga2
97.6 13
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
21d2zgwa1
not modelled 97.4 50
Fold:SH3-like barrel
Superfamily:C-terminal domain of transcriptional repressors
Family:Biotin repressor (BirA)
22c2e5aA_
not modelled 97.3 12
PDB header:ligase
Chain: A: PDB Molecule:lipoyltransferase 1;
PDBTitle: crystal structure of bovine lipoyltransferase in complex2 with lipoyl-amp
23c5ij6A_
not modelled 97.1 18
PDB header:ligase,transferase
Chain: A: PDB Molecule:lipoate--protein ligase;
PDBTitle: crystal structure of enterococcus faecalis lipoate-protein ligase a2 (lpla-1) in complex with lipoic acid
24c5ibyA_
not modelled 97.0 13
PDB header:ligase,transferase
Chain: A: PDB Molecule:lipoate--protein ligase;
PDBTitle: crystal structure of enterococcus faecalis lipoate-protein ligase a2 (lpla-2) in complex with lipoic acid
25d2p5ia1
not modelled 97.0 18
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
26c1x2gB_
not modelled 96.6 14
PDB header:ligase
Chain: B: PDB Molecule:lipoate-protein ligase a;
PDBTitle: crystal structure of lipate-protein ligase a from2 escherichia coli
27c5t8uA_
not modelled 94.4 13
PDB header:ligase
Chain: A: PDB Molecule:lipoate-protein ligase 1;
PDBTitle: crystal structure of p. falciparum lipl1 in complex lipoate
28d1d3bb_
not modelled 92.9 20
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
29d1i8fa_
not modelled 92.8 31
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
30d1d3bl_
not modelled 92.6 20
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
31c4c92G_
not modelled 92.4 36
PDB header:transcription
Chain: G: PDB Molecule:u6 snrna-associated sm-like protein lsm7;
PDBTitle: crystal structure of the yeast lsm1-7 complex
32c3swnC_
not modelled 92.4 27
PDB header:rna binding protein
Chain: C: PDB Molecule:u6 snrna-associated sm-like protein lsm7;
PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings
33c4m77H_
not modelled 91.5 21
PDB header:structural protein
Chain: H: PDB Molecule:u6 snrna-associated sm-like protein lsm8;
PDBTitle: crystal structure of lsm2-8 complex, space group i212121
34c3jb9b_
not modelled 91.4 18
PDB header:rna binding protein/rna
Chain: B: PDB Molecule:pre-mrna-splicing factor cwf10;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
35c3jcr7_
not modelled 91.2 32
PDB header:splicing
Chain: 7: PDB Molecule:lsm7;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
36c3jb9E_
not modelled 91.2 19
PDB header:rna binding protein/rna
Chain: E: PDB Molecule:small nuclear ribonucleoprotein-associated protein b;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
37c4m78H_
not modelled 91.2 21
PDB header:rna binding protein
Chain: H: PDB Molecule:u6 snrna-associated sm-like protein lsm8;
PDBTitle: crystal structure of lsm2-8 complex, space group p21
38d2ddza1
not modelled 91.1 18
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:PH0223-like
39c3jcr5_
not modelled 90.8 27
PDB header:splicing
Chain: 5: PDB Molecule:lsm5;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
40c2fwkB_
not modelled 90.7 30
PDB header:dna binding protein
Chain: B: PDB Molecule:u6 snrna-associated sm-like protein lsm5;
PDBTitle: crystal structure of cryptosporidium parvum u6 snrna-associated sm-2 like protein lsm5
41c3jb9J_
not modelled 90.7 27
PDB header:rna binding protein/rna
Chain: J: PDB Molecule:small nuclear ribonucleoprotein g;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
42c4c8qE_
not modelled 90.6 24
PDB header:transcription
Chain: E: PDB Molecule:u6 snrna-associated sm-like protein lsm5;
PDBTitle: crystal structure of the yeast lsm1-7-pat1 complex
43d1h641_
not modelled 90.6 21
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
44c5mknK_
not modelled 90.5 27
PDB header:rna binding protein
Chain: K: PDB Molecule:like-sm ribonucleoprotein core;
PDBTitle: crystal structure of smap (lsm) protein from methanococcus vannielii
45c3cw15_
not modelled 90.5 27
PDB header:splicing
Chain: 5: PDB Molecule:small nuclear ribonucleoprotein g;
PDB Fragment:residues 1-215; PDBTitle: crystal structure of human spliceosomal u1 snrnp
46d1th7a1
not modelled 90.4 30
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
47c3jcr8_
not modelled 90.1 30
PDB header:splicing
Chain: 8: PDB Molecule:lsm8;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
48c3swnA_
not modelled 90.1 24
PDB header:rna binding protein
Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm5;
PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings
49c3swnT_
not modelled 90.0 29
PDB header:rna binding protein
Chain: T: PDB Molecule:u6 snrna-associated sm-like protein lsm6;
PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings
50d1m5q1_
not modelled 89.9 23
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
51c3qiiA_
not modelled 89.8 13
PDB header:transcription regulator
Chain: A: PDB Molecule:phd finger protein 20;
PDBTitle: crystal structure of tudor domain 2 of human phd finger protein 20
52c3bw1A_
not modelled 89.8 24
PDB header:rna binding protein
Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm3;
PDBTitle: crystal structure of homomeric yeast lsm3 exhibiting novel octameric2 ring organisation
53d1mgqa_
not modelled 89.8 24
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
54c3cw1Z_
not modelled 89.8 23
PDB header:splicing
Chain: Z: PDB Molecule:small nuclear ribonucleoprotein f;
PDBTitle: crystal structure of human spliceosomal u1 snrnp
55c4emgM_
not modelled 89.6 21
PDB header:rna binding protein
Chain: M: PDB Molecule:probable u6 snrna-associated sm-like protein lsm3;
PDBTitle: crystal structure of splsm3
56d1i4k1_
not modelled 89.6 30
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
57c4xq3F_
not modelled 89.4 27
PDB header:rna binding protein
Chain: F: PDB Molecule:like-sm ribonucleoprotein core;
PDBTitle: crystal structure of sso-smap2
58c3pgwB_
not modelled 89.0 24
PDB header:splicing/dna/rna
Chain: B: PDB Molecule:sm b;
PDBTitle: crystal structure of human u1 snrnp
59c4c8qF_
not modelled 88.8 30
PDB header:transcription
Chain: F: PDB Molecule:u6 snrna-associated sm-like protein lsm6;
PDBTitle: crystal structure of the yeast lsm1-7-pat1 complex
60c3jcr3_
not modelled 88.2 15
PDB header:splicing
Chain: 3: PDB Molecule:lsm3;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
61c4c8qA_
not modelled 88.0 23
PDB header:transcription
Chain: A: PDB Molecule:sm-like protein lsm1;
PDBTitle: crystal structure of the yeast lsm1-7-pat1 complex
62d1d3ba_
not modelled 87.9 18
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
63c3pgwQ_
not modelled 87.9 24
PDB header:splicing/dna/rna
Chain: Q: PDB Molecule:sm b;
PDBTitle: crystal structure of human u1 snrnp
64c1b34A_
not modelled 87.7 23
PDB header:rna binding protein
Chain: A: PDB Molecule:protein (small nuclear ribonucleoprotein sm d1);
PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain
65d1b34a_
not modelled 87.7 23
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
66d1jbma_
not modelled 87.4 25
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
67c5ganr_
not modelled 87.2 20
PDB header:transcription
Chain: R: PDB Molecule:
PDBTitle: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at2 3.7 angstrom
68c1n9sH_
not modelled 87.0 24
PDB header:translation
Chain: H: PDB Molecule:small nuclear ribonucleoprotein f;
PDBTitle: crystal structure of yeast smf in spacegroup p43212
69c4c92D_
not modelled 86.9 27
PDB header:transcription
Chain: D: PDB Molecule:u6 snrna-associated sm-like protein lsm4;
PDBTitle: crystal structure of the yeast lsm1-7 complex
70c3jb9D_
not modelled 86.6 24
PDB header:rna binding protein/rna
Chain: D: PDB Molecule:small nuclear ribonucleoprotein sm d3;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
71c2ldmA_
not modelled 85.9 13
PDB header:transcription/protein binding
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of human phf20 tudor2 domain bound to a p53 segment2 containing a dimethyllysine analog p53k370me2
72c4c92A_
not modelled 85.7 23
PDB header:transcription
Chain: A: PDB Molecule:sm-like protein lsm1;
PDBTitle: crystal structure of the yeast lsm1-7 complex
73d2fwka1
not modelled 85.7 30
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
74c5gaon_
not modelled 85.6 24
PDB header:transcription
Chain: N: PDB Molecule:
PDBTitle: head region of the yeast spliceosomal u4/u6.u5 tri-snrnp
75c3cw1A_
not modelled 85.4 27
PDB header:splicing
Chain: A: PDB Molecule:small nuclear ribonucleoprotein-associated proteins b and
PDBTitle: crystal structure of human spliceosomal u1 snrnp
76c5ganm_
not modelled 85.3 10
PDB header:transcription
Chain: M: PDB Molecule:
PDBTitle: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at2 3.7 angstrom
77c3jcr4_
not modelled 84.5 21
PDB header:splicing
Chain: 4: PDB Molecule:lsm4;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
78c4uc4A_
not modelled 84.4 17
PDB header:replication
Chain: A: PDB Molecule:lysine-specific demethylase 4b;
PDBTitle: crystal structure of hybrid tudor domain of human lysine demethylase2 kdm4b
79c2qqsB_
not modelled 84.2 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:jmjc domain-containing histone demethylation
PDBTitle: jmjd2a tandem tudor domains in complex with a trimethylated2 histone h4-k20 peptide
80c3jcr2_
not modelled 82.8 24
PDB header:splicing
Chain: 2: PDB Molecule:lsm2;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
81c4c92B_
not modelled 82.8 27
PDB header:transcription
Chain: B: PDB Molecule:u6 snrna-associated sm-like protein lsm2;
PDBTitle: crystal structure of the yeast lsm1-7 complex
82c3p8dB_
not modelled 82.8 13
PDB header:protein binding
Chain: B: PDB Molecule:medulloblastoma antigen mu-mb-50.72;
PDBTitle: crystal structure of the second tudor domain of human phf20 (homodimer2 form)
83c5gank_
not modelled 82.2 24
PDB header:transcription
Chain: K: PDB Molecule:13 kda ribonucleoprotein-associated protein;
PDBTitle: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at2 3.7 angstrom
84c4emhY_
not modelled 82.2 29
PDB header:rna binding protein
Chain: Y: PDB Molecule:
PDBTitle: crystal structure of splsm4
85c3cw1D_
not modelled 81.3 18
PDB header:splicing
Chain: D: PDB Molecule:small nuclear ribonucleoprotein sm d3;
PDBTitle: crystal structure of human spliceosomal u1 snrnp
86d1n9sc_
not modelled 81.3 24
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
87c5uz5K_
not modelled 81.1 26
PDB header:nuclear protein/rna
Chain: K: PDB Molecule:small nuclear ribonucleoprotein-associated protein b;
PDBTitle: s. cerevisiae u1 snrnp
88d1n9ra_
not modelled 80.2 21
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
89d1ljoa_
not modelled 79.9 35
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
90c1b34B_
not modelled 79.8 13
PDB header:rna binding protein
Chain: B: PDB Molecule:protein (small nuclear ribonucleoprotein sm d2);
PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain
91d1b34b_
not modelled 79.8 13
Fold:Sm-like fold
Superfamily:Sm-like ribonucleoproteins
Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
92c2equA_
not modelled 76.1 11
PDB header:protein binding
Chain: A: PDB Molecule:phd finger protein 20-like 1;
PDBTitle: solution structure of the tudor domain of phd finger2 protein 20-like 1
93c2e5pA_
not modelled 72.7 16
PDB header:transcription
Chain: A: PDB Molecule:phd finger protein 1;
PDBTitle: solution structure of the tudor domain of phd finger2 protein 1 (phf1 protein)
94c2xdpA_
not modelled 72.3 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 4c;
PDBTitle: crystal structure of the tudor domain of human jmjd2c
95c3jcr6_
not modelled 68.9 30
PDB header:splicing
Chain: 6: PDB Molecule:lsm6;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
96c5gaol_
not modelled 64.1 24
PDB header:transcription
Chain: L: PDB Molecule:
PDBTitle: head region of the yeast spliceosomal u4/u6.u5 tri-snrnp
97d1sg5a1
not modelled 62.7 19
Fold:Rof/RNase P subunit-like
Superfamily:Rof/RNase P subunit-like
Family:Rof-like
98c3jb9m_
not modelled 62.5 11
PDB header:rna binding protein/rna
Chain: M: PDB Molecule:pre-mrna-processing protein 45;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
99c3cw1W_
not modelled 60.6 19
PDB header:splicing
Chain: W: PDB Molecule:small nuclear ribonucleoprotein e;
PDBTitle: crystal structure of human spliceosomal u1 snrnp
100c5ganp_
not modelled 55.5 9
PDB header:transcription
Chain: P: PDB Molecule:
PDBTitle: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at2 3.7 angstrom
101c1xniI_
not modelled 55.4 22
PDB header:cell cycle
Chain: I: PDB Molecule:tumor suppressor p53-binding protein 1;
PDBTitle: tandem tudor domain of 53bp1
102c2e5qA_
not modelled 54.5 18
PDB header:transcription
Chain: A: PDB Molecule:phd finger protein 19;
PDBTitle: solution structure of the tudor domain of phd finger2 protein 19, isoform b [homo sapiens]
103c3pgwV_
not modelled 51.7 11
PDB header:splicing/dna/rna
Chain: V: PDB Molecule:sm-d2;
PDBTitle: crystal structure of human u1 snrnp
104c5gl6A_
not modelled 49.7 7
PDB header:ribosomal protein
Chain: A: PDB Molecule:ribosome maturation factor rimp;
PDBTitle: msmeg rimp
105d1ib8a1
not modelled 48.7 15
Fold:Sm-like fold
Superfamily:YhbC-like, C-terminal domain
Family:YhbC-like, C-terminal domain
106c4qtkB_
not modelled 46.6 21
PDB header:transcription/dna
Chain: B: PDB Molecule:white-opaque regulator 1;
PDBTitle: complex of wopr domain of wor1 in candida albicans with the 17bp dsdna
107c4a53A_
not modelled 45.2 25
PDB header:rna binding protein
Chain: A: PDB Molecule:edc3;
PDBTitle: structural basis of the dcp1:dcp2 mrna decapping complex activation2 by edc3 and scd6
108c4m8bR_
not modelled 45.0 20
PDB header:transcription/dna
Chain: R: PDB Molecule:yhr177w;
PDBTitle: fungal protein
109c5szeA_
not modelled 44.6 19
PDB header:rna-binding protein/rna
Chain: A: PDB Molecule:rna-binding protein hfq;
PDBTitle: crystal structure of aquifex aeolicus hfq-rna complex at 1.5a
110c4tseA_
not modelled 43.6 21
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase mib1;
PDBTitle: crystal structure of the mib repeat domain of mind bomb 1
111d2qqra2
not modelled 42.1 23
Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
112c1y96D_
not modelled 41.7 19
PDB header:rna binding protein
Chain: D: PDB Molecule:gem-associated protein 7;
PDBTitle: crystal structure of the gemin6/gemin7 heterodimer from the2 human smn complex
113c2eqjA_
not modelled 40.7 15
PDB header:transcription
Chain: A: PDB Molecule:metal-response element-binding transcription
PDBTitle: solution structure of the tudor domain of metal-response2 element-binding transcription factor 2
114c2m0oA_
not modelled 38.3 17
PDB header:peptide binding protein
Chain: A: PDB Molecule:phd finger protein 1;
PDBTitle: the solution structure of human phf1 in complex with h3k36me3
115c1ssfA_
not modelled 37.5 20
PDB header:cell cycle
Chain: A: PDB Molecule:transformation related protein 53 binding
PDBTitle: solution structure of the mouse 53bp1 fragment (residues2 1463-1617)
116c4a54A_
not modelled 33.6 27
PDB header:rna binding protein/hydrolase
Chain: A: PDB Molecule:edc3;
PDBTitle: structural basis of the dcp1:dcp2 mrna decapping complex activation2 by edc3 and scd6
117c2hqxB_
not modelled 26.9 10
PDB header:transcription
Chain: B: PDB Molecule:p100 co-activator tudor domain;
PDBTitle: crystal structure of human p100 tudor domain conserved2 region
118d2hqxa1
not modelled 26.9 10
Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
119c3lv2A_
not modelled 26.6 20
PDB header:transferase
Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase;
PDBTitle: crystal structure of mycobacterium tuberculosis 7,8-diaminopelargonic2 acid synthase in complex with substrate analog sinefungin
120c6ekvA_
not modelled 25.5 44
PDB header:lipid binding protein
Chain: A: PDB Molecule:toxin complex component orf-x2;
PDBTitle: structure of orfx2 from clostridium botulinum a2

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below