Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3301c_(phoY1)_3686909_3687574
DateThu Aug 8 16:20:51 BST 2019
Unique Job IDca4c86c78c8838bc
SequenceMRTVYHQRLT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:55.184 Y:69.813 Z:27.826
Model (left) based on template d1sumb_
Top template information
Fold:Spectrin repeat-like
Superfamily:PhoU-like
Family:PhoU-like
Confidence and coverage
Confidence:100.0% Coverage: 95%
209 residues ( 95% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1sumb_



100.0 17
Fold:Spectrin repeat-like
Superfamily:PhoU-like
Family:PhoU-like
2d1t72a_



100.0 24
Fold:Spectrin repeat-like
Superfamily:PhoU-like
Family:PhoU-like
3d1xwma_



100.0 29
Fold:Spectrin repeat-like
Superfamily:PhoU-like
Family:PhoU-like
4c4q25B_



100.0 23
PDB header:unknown function
Chain: B: PDB Molecule:phosphate-specific transport system accessory protein phou
PDBTitle: crystal structure of phou from pseudomonas aeruginosa
5c2i0mA_



100.0 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phosphate transport system protein phou;
PDBTitle: crystal structure of the phosphate transport system regulatory protein2 phou from streptococcus pneumoniae
6c3l39A_



99.8 9
PDB header:phosphate-binding protein
Chain: A: PDB Molecule:putative phou-like phosphate regulatory protein;
PDBTitle: crystal structure of putative phou-like phosphate regulatory protein2 (bt4638) from bacteroides thetaiotaomicron vpi-5482 at 1.93 a3 resolution
7c2oltB_



99.8 15
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a phou-like protein (so_3770) from shewanella2 oneidensis mr-1 at 2.00 a resolution
8d1vcta1



99.6 22
Fold:Spectrin repeat-like
Superfamily:PhoU-like
Family:PhoU-like
9c2bknA_



99.3 22
PDB header:membrane protein
Chain: A: PDB Molecule:hypothetical protein ph0236;
PDBTitle: structure analysis of unknown function protein
10c5vwvB_



38.1 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: bak core latch dimer in complex with bim-bh3 - cubic
11c5vwwC_



37.6 25
PDB header:apoptosis
Chain: C: PDB Molecule:bcl-2-like protein 11;
PDBTitle: bak core latch dimer in complex with bim-rt - tetragonal
12c5vwwD_



34.5 25
PDB header:apoptosis
Chain: D: PDB Molecule:bcl-2-like protein 11;
PDBTitle: bak core latch dimer in complex with bim-rt - tetragonal
13c1pq1B_



29.3 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl2-like protein 11;
PDBTitle: crystal structure of bcl-xl/bim
14c3izcw_



28.2 16
PDB header:ribosome
Chain: W: PDB Molecule:60s ribosomal protein rpl22 (l22e);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
15c5ua4B_



27.4 25
PDB header:apoptosis
Chain: B: PDB Molecule:bh3-interacting domain death agonist;
PDBTitle: crystal structure of a179l:bid bh3 complex
16c5vmoB_



22.5 17
PDB header:viral protein/apoptosis
Chain: B: PDB Molecule:bcl-2 interacting mediator of cell death;
PDBTitle: crystal structure of grouper iridovirus giv66:bim complex
17d1l0oc_



20.9 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
18c1l0oC_



20.9 21
PDB header:protein binding
Chain: C: PDB Molecule:sigma factor;
PDBTitle: crystal structure of the bacillus stearothermophilus anti-2 sigma factor spoiiab with the sporulation sigma factor3 sigmaf
19c2k7wB_



20.3 30
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: bax activation is initiated at a novel interaction site
20c4qvfB_



18.6 25
PDB header:apoptosis
Chain: B: PDB Molecule:peptide from bcl-2-like protein 11;
PDBTitle: crystal structure of bcl-xl in complex with bim bh3 domain
21c5wosB_



not modelled 18.6 25
PDB header:viral protein
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: structural and functional insights into canarypox virus cnp0582 regulation of apoptosis
22c4zieC_



not modelled 18.1 25
PDB header:apoptosis
Chain: C: PDB Molecule:bcl-2-like protein 11;
PDBTitle: crystal structure of core/latch dimer of bax in complex with bimbh3
23c4d2mB_



not modelled 18.1 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: vaccinia virus f1l bound to bim bh3
24c4d2mD_



not modelled 18.0 25
PDB header:apoptosis
Chain: D: PDB Molecule:bcl-2-like protein 11;
PDBTitle: vaccinia virus f1l bound to bim bh3
25c2v6qB_



not modelled 17.9 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: crystal structure of a bhrf-1 : bim bh3 complex
26c2wh6B_



not modelled 17.8 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: crystal structure of anti-apoptotic bhrf1 in complex with the bim bh32 domain
27c2pqkB_



not modelled 17.7 25
PDB header:apoptosis
Chain: B: PDB Molecule:bim bh3 peptide;
PDBTitle: x-ray crystal structure of human mcl-1 in complex with bim bh3
28c2nl9B_



not modelled 17.5 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: crystal structure of the mcl-1:bim bh3 complex
29c6qfiB_



not modelled 17.5 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: structure of human mcl-1 in complex with bim bh3 peptide
30c3fdlB_



not modelled 17.2 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: bim bh3 peptide in complex with bcl-xl
31c3kj2B_



not modelled 17.1 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: mcl-1 in complex with bim bh3 mutant f4ae
32c3ci9B_



not modelled 16.2 18
PDB header:transcription
Chain: B: PDB Molecule:heat shock factor-binding protein 1;
PDBTitle: crystal structure of the human hsbp1
33d1seta1



not modelled 14.6 17
Fold:Long alpha-hairpin
Superfamily:tRNA-binding arm
Family:Seryl-tRNA synthetase (SerRS)
34c3kz0C_



not modelled 12.6 17
PDB header:apoptosis
Chain: C: PDB Molecule:mcl-1 specific peptide mb7;
PDBTitle: mcl-1 complex with mcl-1-specific selected peptide
35c3kz0D_



not modelled 12.6 17
PDB header:apoptosis
Chain: D: PDB Molecule:mcl-1 specific peptide mb7;
PDBTitle: mcl-1 complex with mcl-1-specific selected peptide
36c5l33A_



not modelled 12.1 23
PDB header:de novo protein
Chain: A: PDB Molecule:denovo ntf2;
PDBTitle: crystal structure of a de novo designed protein with curved beta-sheet
37d1uptb_



not modelled 11.6 3
Fold:GRIP domain
Superfamily:GRIP domain
Family:GRIP domain
38c3d7vB_



not modelled 10.8 29
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: crystal structure of mcl-1 in complex with an mcl-1 selective bh32 ligand
39d1eqzb_



not modelled 10.2 19
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
40d1kx5d_



not modelled 10.1 21
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
41d1s32d_



not modelled 10.1 21
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
42c3io8D_



not modelled 10.0 30
PDB header:apoptosis
Chain: D: PDB Molecule:bcl-2-like protein 11;
PDBTitle: biml12f in complex with bcl-xl
43d1nexa1



not modelled 9.7 15
Fold:Skp1 dimerisation domain-like
Superfamily:Skp1 dimerisation domain-like
Family:Skp1 dimerisation domain-like
44c4j7oA_



not modelled 9.6 40
PDB header:cell invasion
Chain: A: PDB Molecule:putative surface cell antigen sca2;
PDBTitle: structure of the n-terminal repeat domain of rickettsia sca2
45c1nfoA_



not modelled 9.4 11
PDB header:lipid transport
Chain: A: PDB Molecule:apolipoprotein e2;
PDBTitle: apolipoprotein e2 (apoe2, d154a mutation)
46c3e6sD_



not modelled 9.3 9
PDB header:oxidoreductase
Chain: D: PDB Molecule:ferritin;
PDBTitle: crystal structure of ferritin soaked with iron from pseudo-nitzschia2 multiseries
47c3axjB_



not modelled 9.1 9
PDB header:dna binding protein
Chain: B: PDB Molecule:translin associated factor x, isoform b;
PDBTitle: high resolution crystal structure of c3po
48d1jmsa1



not modelled 9.1 7
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
49c4h63K_



not modelled 8.9 24
PDB header:transcription
Chain: K: PDB Molecule:mediator of rna polymerase ii transcription subunit 11;
PDBTitle: structure of the schizosaccharomyces pombe mediator head module
50c3io8B_



not modelled 8.8 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: biml12f in complex with bcl-xl
51c6qeqD_



not modelled 8.6 17
PDB header:dna binding protein
Chain: D: PDB Molecule:pcff;
PDBTitle: pcff from enterococcus faecalis pcf10
52c3kj0B_



not modelled 8.4 22
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: mcl-1 in complex with bim bh3 mutant i2dy
53d1fs1b1



not modelled 8.0 18
Fold:Skp1 dimerisation domain-like
Superfamily:Skp1 dimerisation domain-like
Family:Skp1 dimerisation domain-like
54c3io9B_



not modelled 7.5 25
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: biml12y in complex with mcl-1
55c3kgkA_



not modelled 7.4 27
PDB header:chaperone
Chain: A: PDB Molecule:arsenical resistance operon trans-acting repressor arsd;
PDBTitle: crystal structure of arsd
56d1fs2b1



not modelled 7.3 18
Fold:Skp1 dimerisation domain-like
Superfamily:Skp1 dimerisation domain-like
Family:Skp1 dimerisation domain-like
57c3kj1B_



not modelled 7.1 17
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-like protein 11;
PDBTitle: mcl-1 in complex with bim bh3 mutant i2da
58d2o02a1



not modelled 7.0 12
Fold:alpha-alpha superhelix
Superfamily:14-3-3 protein
Family:14-3-3 protein
59d1uptd_



not modelled 7.0 4
Fold:GRIP domain
Superfamily:GRIP domain
Family:GRIP domain
60c2k6sB_



not modelled 6.9 12
PDB header:protein transport
Chain: B: PDB Molecule:rab11fip2 protein;
PDBTitle: structure of rab11-fip2 c-terminal coiled-coil domain
61c3p8cF_



not modelled 6.8 11
PDB header:protein binding
Chain: F: PDB Molecule:abl interactor 2;
PDBTitle: structure and control of the actin regulatory wave complex
62d2coha1



not modelled 6.7 9
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
63c3iz5w_



not modelled 6.7 23
PDB header:ribosome
Chain: W: PDB Molecule:60s ribosomal protein l22 (l22e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
64c5jreC_



not modelled 6.5 9
PDB header:dna binding protein
Chain: C: PDB Molecule:neq131;
PDBTitle: crystal structure of nec3po in complex with ssdna.
65c3d1dC_



not modelled 6.4 24
PDB header:nuclear protein
Chain: C: PDB Molecule:rna-induced transcriptional silencing complex
PDBTitle: hexagonal crystal structure of tas3 c-terminal alpha motif
66c4dg7D_



not modelled 6.3 13
PDB header:dna binding protein
Chain: D: PDB Molecule:gm27569p;
PDBTitle: low resolution structure of drosophila translin
67c3fmtF_



not modelled 6.2 16
PDB header:replication inhibitor/dna
Chain: F: PDB Molecule:protein seqa;
PDBTitle: crystal structure of seqa bound to dna
68d1ofcx1



not modelled 6.1 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Myb/SANT domain
69c3ktbD_



not modelled 6.0 27
PDB header:transcription regulator
Chain: D: PDB Molecule:arsenical resistance operon trans-acting repressor;
PDBTitle: crystal structure of arsenical resistance operon trans-acting2 repressor from bacteroides vulgatus atcc 8482
70d1t6ua_



not modelled 5.9 8
Fold:Four-helical up-and-down bundle
Superfamily:Nickel-containing superoxide dismutase, NiSOD
Family:Nickel-containing superoxide dismutase, NiSOD
71d1rp3a1



not modelled 5.7 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma3 domain
72d1q0ga_



not modelled 5.7 8
Fold:Four-helical up-and-down bundle
Superfamily:Nickel-containing superoxide dismutase, NiSOD
Family:Nickel-containing superoxide dismutase, NiSOD
73d1tzyb_



not modelled 5.6 19
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
74d1ku2a1



not modelled 5.6 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma3 domain
75d2ovra1



not modelled 5.6 19
Fold:Skp1 dimerisation domain-like
Superfamily:Skp1 dimerisation domain-like
Family:Skp1 dimerisation domain-like
76d1x92a_



not modelled 5.4 16
Fold:SIS domain
Superfamily:SIS domain
Family:mono-SIS domain
77c2xa0C_



not modelled 5.3 25
PDB header:apoptosis
Chain: C: PDB Molecule:apoptosis regulator bax;
PDBTitle: crystal structure of bcl-2 in complex with a bax bh32 peptide
78c5toiB_



not modelled 5.3 14
PDB header:viral protein
Chain: B: PDB Molecule:polymerase cofactor vp35;
PDBTitle: crystal structure of the marburg virus vp35 oligomerization domain2 p4222
79c4d18I_



not modelled 5.3 8
PDB header:signaling protein
Chain: I: PDB Molecule:cop9 signalosome complex subunit 1;
PDBTitle: crystal structure of the cop9 signalosome
80c4khaA_



not modelled 5.3 14
PDB header:chaperone/nuclear protein
Chain: A: PDB Molecule:spt16m-histone h2b 1.1 chimera;
PDBTitle: structural basis of histone h2a-h2b recognition by the essential2 chaperone fact
81d1fpoa2



not modelled 5.2 19
Fold:Open three-helical up-and-down bundle
Superfamily:HSC20 (HSCB), C-terminal oligomerisation domain
Family:HSC20 (HSCB), C-terminal oligomerisation domain
82c5xauC_



not modelled 5.2 13
PDB header:cell adhesion
Chain: C: PDB Molecule:laminin subunit gamma-1;
PDBTitle: crystal structure of integrin binding fragment of laminin-511

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