Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3304_(-)_3691312_3691791
DateThu Aug 8 16:20:51 BST 2019
Unique Job ID57f7fb3ccad9223a
SequenceVPLYAAYGSN ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:39.906 Y:34.044 Z:43.800
Model (left) based on template c2rbhA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:gamma-glutamyl cyclotransferase;
PDBTitle: gamma-glutamyl cyclotransferase
Confidence and coverage
Confidence:100.0% Coverage: 92%
146 residues ( 92% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2rbhA_



100.0 26
PDB header:transferase
Chain: A: PDB Molecule:gamma-glutamyl cyclotransferase;
PDBTitle: gamma-glutamyl cyclotransferase
2c2qikA_



100.0 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0131 protein ykqa;
PDBTitle: crystal structure of ykqa from bacillus subtilis. northeast structural2 genomics target sr631
3c5hwiA_



99.8 19
PDB header:transferase
Chain: A: PDB Molecule:glutathione-specific gamma-glutamylcyclotransferase;
PDBTitle: crystal structure of selenomethionine labelled gama glutamyl2 cyclotransferease specific to glutathione from yeast
4c2g0qA_



99.7 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:at5g39720.1 protein;
PDBTitle: solution structure of at5g39720.1 from arabidopsis thaliana
5c2jqvA_



99.7 17
PDB header:structural genomics
Chain: A: PDB Molecule:aig2 protein-like;
PDBTitle: solution structure at3g28950.1 from arabidopsis thaliana
6d1xhsa_



99.6 20
Fold:Gamma-glutamyl cyclotransferase-like
Superfamily:Gamma-glutamyl cyclotransferase-like
Family:Gamma-glutamyl cyclotransferase-like
7c3jubA_



99.3 18
PDB header:transferase
Chain: A: PDB Molecule:aig2-like domain-containing protein 1;
PDBTitle: human gamma-glutamylamine cyclotransferase
8d1vkba_



99.3 16
Fold:Gamma-glutamyl cyclotransferase-like
Superfamily:Gamma-glutamyl cyclotransferase-like
Family:Gamma-glutamyl cyclotransferase-like
9d1v30a_



99.2 13
Fold:Gamma-glutamyl cyclotransferase-like
Superfamily:Gamma-glutamyl cyclotransferase-like
Family:Gamma-glutamyl cyclotransferase-like
10c5c5zA_



96.9 15
PDB header:hydrolase
Chain: A: PDB Molecule:glutamyl-trna amidotransferase;
PDBTitle: crystal structure analysis of c4763, a uropathogenic e. coli-specific2 protein
11c2gacA_



22.9 10
PDB header:hydrolase
Chain: A: PDB Molecule:glycosylasparaginase;
PDBTitle: t152c mutant glycosylasparaginase from flavobacterium2 meningosepticum
12c4p9gA_



17.5 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:2,4'-dihydroxyacetophenone dioxygenase;
PDBTitle: structure of the 2,4'-dihydroxyacetophenone dioxygenase from2 alcaligenes sp.
13d2ejna1



13.7 31
Fold:Uteroglobin-like
Superfamily:Uteroglobin-like
Family:Uteroglobin-like
14c6ig4B_



11.2 60
PDB header:transferase
Chain: B: PDB Molecule:phosphatidate cytidylyltransferase, mitochondrial;
PDBTitle: structure of mitochondrial cdp-dag synthase tam41, delta 74
15c2k89A_



10.6 4
PDB header:protein binding
Chain: A: PDB Molecule:phospholipase a-2-activating protein;
PDBTitle: solution structure of a novel ubiquitin-binding domain from2 human plaa (pfuc, gly76-pro77 cis isomer)
16c4yxaA_



9.2 27
PDB header:protein transport
Chain: A: PDB Molecule:surface presentation of antigens protein spao;
PDBTitle: complex of spao(spoa1,2 semet) and orgb(apar)::t4lysozyme fusion2 protein
17d2gtvx1



8.4 0
Fold:Chorismate mutase II
Superfamily:Chorismate mutase II
Family:monomeric chorismate mutase
18c3qbcB_



8.3 33
PDB header:transferase/transferase inhibitor
Chain: B: PDB Molecule:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
PDBTitle: structure and design of a new pterin site inhibitor of s. aureus hppk
19d1cbka_



8.2 40
Fold:Ferredoxin-like
Superfamily:6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Family:6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
20c1p4vA_



7.7 10
PDB header:hydrolase
Chain: A: PDB Molecule:n(4)-(beta-n-acetylglucosaminyl)-l-asparaginase
PDBTitle: crystal structure of the glycosylasparaginase precursor2 d151n mutant with glycine
21c2p22D_



not modelled 7.7 50
PDB header:transport protein
Chain: D: PDB Molecule:hypothetical 12.0 kda protein in ade3-ser2 intergenic
PDBTitle: structure of the yeast escrt-i heterotetramer core
22d2nn6i1



not modelled 7.4 11
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
23d1f9ya_



not modelled 7.1 50
Fold:Ferredoxin-like
Superfamily:6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Family:6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
24d1b77a2



not modelled 6.3 27
Fold:DNA clamp
Superfamily:DNA clamp
Family:DNA polymerase processivity factor
25d1czda2



not modelled 6.2 20
Fold:DNA clamp
Superfamily:DNA clamp
Family:DNA polymerase processivity factor
26d1utga_



not modelled 5.6 42
Fold:Uteroglobin-like
Superfamily:Uteroglobin-like
Family:Uteroglobin-like
27d1n7za_



not modelled 5.6 19
Fold:Baseplate structural protein gp8
Superfamily:Baseplate structural protein gp8
Family:Baseplate structural protein gp8
28c5lskP_



not modelled 5.5 25
PDB header:cell cycle
Chain: P: PDB Molecule:centromere protein c;
PDBTitle: crystal structure of the human kinetochore mis12-cenp-c complex

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite