Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3311_(-)_3698292_3699554
DateThu Aug 8 16:20:52 BST 2019
Unique Job ID706e8020ac6b7116
SequenceMVADLVPIRL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.097 Y:40.077 Z:56.200
Model (left) based on template c6dnmA_
Top template information
PDB header:chaperone
Chain: A: PDB Molecule:export chaperone sats;
PDBTitle: the crystal structure of sats c-terminal domain
Confidence and coverage
Confidence:100.0% Coverage: 45%
187 residues ( 45% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6dnmA_
100.0 100
PDB header:chaperone
Chain: A: PDB Molecule:export chaperone sats;
PDBTitle: the crystal structure of sats c-terminal domain
2d1gph12
61.5 17
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Class II glutamine amidotransferases
3d1xffa_
56.0 15
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Class II glutamine amidotransferases
4d2a1ha1
54.1 13
Fold:D-aminoacid aminotransferase-like PLP-dependent enzymes
Superfamily:D-aminoacid aminotransferase-like PLP-dependent enzymes
Family:D-aminoacid aminotransferase-like PLP-dependent enzymes
5c3dtfB_
52.0 21
PDB header:transferase
Chain: B: PDB Molecule:branched-chain amino acid aminotransferase;
PDBTitle: structural analysis of mycobacterial branched chain aminotransferase-2 implications for inhibitor design
6c4dqnA_
47.3 22
PDB header:transferase
Chain: A: PDB Molecule:putative branched-chain amino acid aminotransferase ilve;
PDBTitle: crystal structure of the branched-chain aminotransferase from2 streptococcus mutans
7c2abjG_
42.7 15
PDB header:transferase
Chain: G: PDB Molecule:branched-chain-amino-acid aminotransferase, cytosolic;
PDBTitle: crystal structure of human branched chain amino acid transaminase in a2 complex with an inhibitor, c16h10n2o4f3scl, and pyridoxal 5'3 phosphate.
8c2vtwF_
41.8 19
PDB header:viral protein
Chain: F: PDB Molecule:fiber protein 2;
PDBTitle: structure of the c-terminal head domain of the fowl2 adenovirus type 1 short fibre
9c1gph1_
40.6 21
PDB header:transferase
Chain: 1: PDB Molecule:glutamine phosphoribosyl-pyrophosphate amidotransferase;
PDBTitle: structure of the allosteric regulatory enzyme of purine biosynthesis
10c2kuaA_
36.0 10
PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2-like protein 10;
PDBTitle: solution structure of a divergent bcl-2 protein
11c1wd6B_
32.3 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein ydhr;
PDBTitle: crystal structure of jw1657 from escherichia coli
12c6cfzC_
31.5 42
PDB header:nuclear protein
Chain: C: PDB Molecule:dad2;
PDBTitle: structure of the dash/dam1 complex shows its role at the yeast2 kinetochore-microtubule interface
13c3uzbA_
30.7 14
PDB header:transferase
Chain: A: PDB Molecule:branched-chain-amino-acid aminotransferase;
PDBTitle: crystal structures of branched-chain aminotransferase from deinococcus2 radiodurans complexes with alpha-ketoisocaproate and l-glutamate3 suggest its radio-resistance for catalysis
14c2hq3A_
29.7 26
PDB header:metal transport
Chain: A: PDB Molecule:nosl protein;
PDBTitle: solution nmr structure of the apo-nosl protein from2 achromobacter cycloclastes
15d2hpua1
29.7 26
Fold:NosL/MerB-like
Superfamily:NosL/MerB-like
Family:NosL-like
16c1ecjB_
28.2 21
PDB header:transferase
Chain: B: PDB Molecule:glutamine phosphoribosylpyrophosphate
PDBTitle: escherichia coli glutamine phosphoribosylpyrophosphate2 (prpp) amidotransferase complexed with 2 amp per tetramer
17c3l7mC_
27.4 18
PDB header:structural protein
Chain: C: PDB Molecule:teichoic acid biosynthesis protein f;
PDBTitle: structure of the wall teichoic acid polymerase tagf, h548a
18d1t0ha_
25.4 20
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
19c2vofA_
24.3 19
PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2-related protein a1;
PDBTitle: structure of mouse a1 bound to the puma bh3-domain
20d2o2xa1
21.0 13
Fold:HAD-like
Superfamily:HAD-like
Family:Histidinol phosphatase-like
21c1wrjA_
not modelled 20.9 18
PDB header:transferase
Chain: A: PDB Molecule:methylated-dna--protein-cysteine
PDBTitle: crystal structure of o6-methylguanine methyltransferase2 from sulfolobus tokodaii
22d1vyua1
not modelled 20.6 20
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
23c5wddA_
not modelled 20.2 10
PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2-related ovarian killer protein;
PDBTitle: crystal structure of chicken bok
24d1zxqa1
not modelled 20.2 21
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C2 set domains
25c2yudA_
not modelled 19.7 19
PDB header:rna binding protein
Chain: A: PDB Molecule:yth domain-containing protein 1;
PDBTitle: solution structure of the yth domain in yth domain-2 containing protein 1 (putative splicing factor yt521)
26c3oqlA_
not modelled 19.7 33
PDB header:transcription
Chain: A: PDB Molecule:tena homolog;
PDBTitle: crystal structure of a tena homolog (pspto1738) from pseudomonas2 syringae pv. tomato str. dc3000 at 2.54 a resolution
27c5d5nA_
not modelled 18.6 22
PDB header:viral protein
Chain: A: PDB Molecule:virion egress protein ul34 homolog;
PDBTitle: crystal structure of the human cytomegalovirus pul50-pul53 complex
28c6h1nA_
not modelled 18.3 14
PDB header:apoptosis
Chain: A: PDB Molecule:bcl2-like 10 (apoptosis facilitator);
PDBTitle: crystal structure of a zebra-fish pro-survival protein nrz-apo
29c3oqlB_
not modelled 18.1 33
PDB header:transcription
Chain: B: PDB Molecule:tena homolog;
PDBTitle: crystal structure of a tena homolog (pspto1738) from pseudomonas2 syringae pv. tomato str. dc3000 at 2.54 a resolution
30c5e8jC_
not modelled 18.0 22
PDB header:translation
Chain: C: PDB Molecule:rnmt-activating mini protein;
PDBTitle: crystal structure of mrna cap guanine-n7 methyltransferase in complex2 with ram
31c3wofB_
not modelled 17.4 50
PDB header:transferase/transcription
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of p23-45 gp39 (6-132) bound to thermus thermophilus2 rna polymerase beta-flap domain
32d2bhua1
not modelled 17.4 40
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:E-set domains of sugar-utilizing enzymes
33c2h6oA_
not modelled 16.7 42
PDB header:viral protein
Chain: A: PDB Molecule:major outer envelope glycoprotein gp350;
PDBTitle: epstein barr virus major envelope glycoprotein
34c4b4sA_
not modelled 16.4 13
PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2-like protein 10;
PDBTitle: crystal structure of a pro-survival bcl-2:bim bh3 complex
35c2gk2B_
not modelled 16.3 10
PDB header:cell adhesion
Chain: B: PDB Molecule:carcinoembryonic antigen-related cell adhesion molecule 1;
PDBTitle: crystal structure of the n terminal domain of human ceacam1
36c2dskA_
not modelled 16.1 20
PDB header:hydrolase
Chain: A: PDB Molecule:chitinase;
PDBTitle: crystal structure of catalytic domain of hyperthermophilic chitinase2 from pyrococcus furiosus
37d1pgja1
not modelled 15.8 21
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
38c3wodG_
not modelled 15.6 50
PDB header:transferase/transcription
Chain: G: PDB Molecule:putative uncharacterized protein;
PDBTitle: rna polymerase-gp39 complex
39c5ua4A_
not modelled 15.3 11
PDB header:apoptosis
Chain: A: PDB Molecule:5-hl;
PDBTitle: crystal structure of a179l:bid bh3 complex
40d1o6aa_
not modelled 15.3 17
Fold:Surface presentation of antigens (SPOA)
Superfamily:Surface presentation of antigens (SPOA)
Family:Surface presentation of antigens (SPOA)
41c2vm6A_
not modelled 15.0 17
PDB header:immune system
Chain: A: PDB Molecule:bcl-2-related protein a1;
PDBTitle: human bcl2-a1 in complex with bim-bh3 peptide
42c1ezaA_
not modelled 15.0 16
PDB header:phosphotransferase
Chain: A: PDB Molecule:enzyme i;
PDBTitle: amino terminal domain of enzyme i from escherichia coli nmr,2 restrained regularized mean structure
43d1uxja2
not modelled 13.6 19
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:Lactate & malate dehydrogenases, C-terminal domain
44d1hxna_
not modelled 13.4 20
Fold:4-bladed beta-propeller
Superfamily:Hemopexin-like domain
Family:Hemopexin-like domain
45d2oz4a2
not modelled 13.1 20
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
46d1prtf_
not modelled 13.0 26
Fold:OB-fold
Superfamily:Bacterial enterotoxins
Family:Bacterial AB5 toxins, B-subunits
47c3uepB_
not modelled 12.8 25
PDB header:protein transport
Chain: B: PDB Molecule:yscq-c, type iii secretion protein;
PDBTitle: crystal structure of yscq-c from yersinia pseudotuberculosis
48c4azzB_
not modelled 12.8 25
PDB header:hydrolase
Chain: B: PDB Molecule:levanase;
PDBTitle: carbohydrate binding module cbm66 from bacillus subtilis
49d1m7xa1
not modelled 12.6 50
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:E-set domains of sugar-utilizing enzymes
50c1zvtA_
not modelled 12.4 19
PDB header:isomerase
Chain: A: PDB Molecule:topoisomerase iv subunit a;
PDBTitle: structure of the e. coli parc c-terminal domain
51c4e8cA_
not modelled 12.2 18
PDB header:hydrolase
Chain: A: PDB Molecule:glycosyl hydrolase, family 35;
PDBTitle: crystal structure of streptococcal beta-galactosidase in complex with2 galactose
52c4ifdH_
not modelled 12.2 18
PDB header:hydrolase/rna
Chain: H: PDB Molecule:exosome complex component rrp4;
PDBTitle: crystal structure of an 11-subunit eukaryotic exosome complex bound to2 rna
53c2k0mA_
not modelled 12.1 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the uncharacterized protein from2 rhodospirillum rubrum gene locus rru_a0810. northeast3 structural genomics target rrr43
54c4zyeA_
not modelled 11.9 13
PDB header:transferase
Chain: A: PDB Molecule:methylated-dna--protein-cysteine methyltransferase;
PDBTitle: crystal structure of sulfolobus solfataricus o6-methylguanine2 methyltransferase
55d1axxa_
not modelled 11.8 18
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
56d1ofda2
not modelled 11.7 30
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
57c4lubA_
not modelled 11.4 22
PDB header:lyase
Chain: A: PDB Molecule:putative prephenate dehydratase;
PDBTitle: x-ray structure of prephenate dehydratase from streptococcus mutans
58d2plga1
not modelled 11.3 24
Fold:Secretion chaperone-like
Superfamily:Type III secretory system chaperone-like
Family:Tll0839-like
59c4l4qA_
not modelled 11.2 23
PDB header:transferase
Chain: A: PDB Molecule:s-adenosylmethionine synthase;
PDBTitle: methionine adenosyltransferase
60c1x5eA_
not modelled 11.0 15
PDB header:electron transport
Chain: A: PDB Molecule:thioredoxin domain containing protein 1;
PDBTitle: the solution structure of the thioredoxin-like domain of2 human thioredoxin-related transmembrane protein
61c2xa0A_
not modelled 10.6 8
PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis regulator bcl-2;
PDBTitle: crystal structure of bcl-2 in complex with a bax bh32 peptide
62d1qhua1
not modelled 10.6 27
Fold:4-bladed beta-propeller
Superfamily:Hemopexin-like domain
Family:Hemopexin-like domain
63c1mq8C_
not modelled 10.2 11
PDB header:immune system
Chain: C: PDB Molecule:intercellular adhesion molecule-1;
PDBTitle: crystal structure of alphal i domain in complex with icam-1
64c1pgjA_
not modelled 10.1 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase;
PDBTitle: x-ray structure of 6-phosphogluconate dehydrogenase from the protozoan2 parasite t. brucei
65d2hiqa1
not modelled 10.1 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Hypothetical protein YdhR
66d1ea0a2
not modelled 10.1 22
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
67d1hyha2
not modelled 10.1 22
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:Lactate & malate dehydrogenases, C-terminal domain
68c5xrwD_
not modelled 9.8 28
PDB header:motor protein
Chain: D: PDB Molecule:fliy;
PDBTitle: crystal structure of flagellar motor switch complex from h. pylori
69c5a15A_
not modelled 9.7 20
PDB header:signaling protein
Chain: A: PDB Molecule:btb/poz domain-containing protein kctd16;
PDBTitle: crystal structure of the btb domain of human kctd16
70d1pkxa2
not modelled 9.3 15
Fold:Cytidine deaminase-like
Superfamily:Cytidine deaminase-like
Family:AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC
71c3iykK_
not modelled 9.3 32
PDB header:virus
Chain: K: PDB Molecule:vp2;
PDBTitle: bluetongue virus structure reveals a sialic acid binding domain,2 amphipathic helices and a central coiled coil in the outer capsid3 proteins
72d1gv0a2
not modelled 9.3 28
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:Lactate & malate dehydrogenases, C-terminal domain
73c3ushB_
not modelled 9.2 46
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the q2s0r5 protein from salinibacter ruber,2 northeast structural genomics consortium target srr207
74d1qhma_
not modelled 9.2 20
Fold:PFL-like glycyl radical enzymes
Superfamily:PFL-like glycyl radical enzymes
Family:PFL-like
75c2ds2B_
not modelled 9.1 10
PDB header:plant protein
Chain: B: PDB Molecule:sweet protein mabinlin-2 chain b;
PDBTitle: crystal structure of mabinlin ii
76c2l3gA_
not modelled 9.1 21
PDB header:signaling protein
Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 7;
PDBTitle: solution nmr structure of ch domain of rho guanine nucleotide exchange2 factor 7 from homo sapiens, northeast structural genomics consortium3 target hr4495e
77c4iohA_
not modelled 9.1 46
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:tll1086 protein;
PDBTitle: crystal structure of the tll1086 protein from thermosynechococcus2 elongatus, northeast structural genomics consortium target ter258
78c3fgrB_
not modelled 9.0 15
PDB header:hydrolase
Chain: B: PDB Molecule:putative phospholipase b-like 2 40 kda form;
PDBTitle: two chain form of the 66.3 kda protein at 1.8 angstroem
79c2mwfA_
not modelled 9.0 22
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation regulator 1;
PDBTitle: nmr structure of fbp28 ww2 mutant y438r dn
80c4bzyC_
not modelled 8.8 40
PDB header:transferase
Chain: C: PDB Molecule:1,4-alpha-glucan-branching enzyme;
PDBTitle: crystal structure of human glycogen branching enzyme (gbe1)
81d1hkoa_
not modelled 8.8 18
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
82c3drzE_
not modelled 8.7 22
PDB header:unknown function
Chain: E: PDB Molecule:btb/poz domain-containing protein kctd5;
PDBTitle: x-ray crystal structure of the n-terminal btb domain of human kctd52 protein
83c1bdsA_
not modelled 8.6 36
PDB header:anti-hypertensive, anti-viral protein
Chain: A: PDB Molecule:bds-i;
PDBTitle: determination of the three-dimensional solution structure of the2 antihypertensive and antiviral protein bds-i from the sea anemone3 anemonia sulcata. a study using nuclear magnetic resonance and hybrid4 distance geometry-dynamical simulated annealing
84d1bdsa_
not modelled 8.6 36
Fold:Defensin-like
Superfamily:Defensin-like
Family:Defensin
85c1lm1A_
not modelled 8.6 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferredoxin-dependent glutamate synthase;
PDBTitle: structural studies on the synchronization of catalytic centers in2 glutamate synthase: native enzyme
86c5vgjG_
not modelled 8.5 46
PDB header:viral protein/immune system
Chain: G: PDB Molecule:1fd6-v1v2-wito;
PDBTitle: crystal structure of the human fab vrc38.01, an hiv-1 v1v2-directed2 neutralizing antibody isolated from donor n90, bound to a scaffolded3 wito v1v2 domain
87c1sfeA_
not modelled 8.4 17
PDB header:dna-binding protein
Chain: A: PDB Molecule:ada o6-methylguanine-dna methyltransferase;
PDBTitle: ada o6-methylguanine-dna methyltransferase from escherichia coli
88d1hc7a3
not modelled 8.3 25
Fold:IF3-like
Superfamily:C-terminal domain of ProRS
Family:C-terminal domain of ProRS
89c2lpdA_
not modelled 8.3 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of a mbth-like protein from burkholderia2 pseudomallei, the etiological agent responsible for melioidosis,3 seattle structural genomics center for infectious disease target4 bupsa.13472.b
90c1t39A_
not modelled 8.3 22
PDB header:transferase/dna
Chain: A: PDB Molecule:methylated-dna--protein-cysteine
PDBTitle: human o6-alkylguanine-dna alkyltransferase covalently2 crosslinked to dna
91c2vdcF_
not modelled 8.2 22
PDB header:oxidoreductase
Chain: F: PDB Molecule:glutamate synthase [nadph] large chain;
PDBTitle: the 9.5 a resolution structure of glutamate synthase from cryo-2 electron microscopy and its oligomerization behavior in solution:3 functional implications.
92c5azaA_
not modelled 8.2 18
PDB header:sugar binding protein, transferase
Chain: A: PDB Molecule:maltose-binding periplasmic protein,oligosaccharyl
PDBTitle: crystal structure of mbp-saglb fusion protein with a 20-residue spacer2 in the connector helix
93d1soxa2
not modelled 8.1 15
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
94c5gquA_
not modelled 8.0 36
PDB header:transferase
Chain: A: PDB Molecule:1,4-alpha-glucan branching enzyme glgb;
PDBTitle: crystal structure of branching enzyme from cyanothece sp. atcc 51142
95c4ht7G_
not modelled 8.0 32
PDB header:protein binding
Chain: G: PDB Molecule:co2 concentrating mechanism protein p;
PDBTitle: co2 concentrating mechanism protein p, ccmp form 2
96d1euea_
not modelled 8.0 13
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
97c5czdB_
not modelled 7.9 23
PDB header:transferase
Chain: B: PDB Molecule:acyl-carrier-protein;
PDBTitle: the complex structure of vink with vinl
98d1ldna2
not modelled 7.9 34
Fold:LDH C-terminal domain-like
Superfamily:LDH C-terminal domain-like
Family:Lactate & malate dehydrogenases, C-terminal domain
99c5us5B_
not modelled 7.9 27
PDB header:structural genomics
Chain: B: PDB Molecule:upf0297 protein ef_1202;
PDBTitle: solution structure of the ireb homodimer

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