Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3314c_(deoA)_3702355_3703638
DateThu Aug 8 16:20:52 BST 2019
Unique Job ID1dba835e83e2d532
SequenceVTDFAFDAPT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:65.666 Y:51.843 Z:61.154
Model (left) based on template c2dsjA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase;
PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8
Confidence and coverage
Confidence:100.0% Coverage: 98%
418 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2dsjA_
100.0 44
PDB header:transferase
Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase;
PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8
2c1brwB_
100.0 47
PDB header:transferase
Chain: B: PDB Molecule:protein (pyrimidine nucleoside phosphorylase);
PDBTitle: the crystal structure of pyrimidine nucleoside2 phosphorylase in a closed conformation
3c2j0fC_
100.0 47
PDB header:transferase
Chain: C: PDB Molecule:thymidine phosphorylase;
PDBTitle: structural basis for non-competitive product inhibition in2 human thymidine phosphorylase: implication for drug design
4c1otpA_
100.0 42
PDB header:phosphorylase
Chain: A: PDB Molecule:thymidine phosphorylase;
PDBTitle: structural and theoretical studies suggest domain movement produces an2 active conformation of thymidine phosphorylase
5c3h5qA_
100.0 40
PDB header:transferase
Chain: A: PDB Molecule:pyrimidine-nucleoside phosphorylase;
PDBTitle: crystal structure of a putative pyrimidine-nucleoside phosphorylase2 from staphylococcus aureus
6c4ga5H_
100.0 34
PDB header:transferase
Chain: H: PDB Molecule:putative thymidine phosphorylase;
PDBTitle: crystal structure of amp phosphorylase c-terminal deletion mutant in2 the apo-form
7c1khdD_
100.0 22
PDB header:transferase
Chain: D: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: crystal structure analysis of the anthranilate2 phosphoribosyltransferase from erwinia carotovora at 1.9 resolution3 (current name, pectobacterium carotovorum)
8d1brwa2
100.0 52
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
9c1vquB_
100.0 21
PDB header:transferase
Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase 2;
PDBTitle: crystal structure of anthranilate phosphoribosyltransferase 22 (17130499) from nostoc sp. at 1.85 a resolution
10d1uoua2
100.0 52
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
11c1v8gB_
100.0 23
PDB header:transferase
Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: crystal structure of anthranilate phosphoribosyltransferase2 (trpd) from thermus thermophilus hb8
12d2tpta2
100.0 52
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
13c1o17A_
100.0 15
PDB header:transferase
Chain: A: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: anthranilate phosphoribosyl-transferase (trpd)
14c2bpqB_
100.0 23
PDB header:transferase
Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: anthranilate phosphoribosyltransferase (trpd) from2 mycobacterium tuberculosis (apo structure)
15c5nofB_
100.0 19
PDB header:transferase
Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: anthranilate phosphoribosyltransferase from thermococcus kodakaraensis
16c4hkmA_
100.0 20
PDB header:transferase
Chain: A: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: crystal structure of an anthranilate phosphoribosyltransferase (target2 id nysgrc-016600) from xanthomonas campestris
17c4gtnA_
100.0 20
PDB header:transferase
Chain: A: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: structure of anthranilate phosphoribosyl transferase from2 acinetobacter baylyi
18c4muoB_
100.0 19
PDB header:dna binding protein
Chain: B: PDB Molecule:uncharacterized protein ybib;
PDBTitle: the trpd2 enzyme from e.coli: ybib
19d2elca2
100.0 24
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
20d1o17a2
100.0 12
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
21d1khda2
not modelled 100.0 21
Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
22d2tpta3
not modelled 100.0 22
Fold:alpha/beta-Hammerhead
Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain
Family:Pyrimidine nucleoside phosphorylase C-terminal domain
23d1brwa3
not modelled 100.0 30
Fold:alpha/beta-Hammerhead
Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain
Family:Pyrimidine nucleoside phosphorylase C-terminal domain
24d1uoua3
not modelled 99.9 27
Fold:alpha/beta-Hammerhead
Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain
Family:Pyrimidine nucleoside phosphorylase C-terminal domain
25d2tpta1
not modelled 99.8 38
Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
26d1brwa1
not modelled 99.8 47
Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
27d1uoua1
not modelled 99.7 47
Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
28d1o17a1
not modelled 99.7 21
Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
29d1khda1
not modelled 99.7 20
Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
30d1v8ga1
not modelled 99.6 25
Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
31d2elca1
not modelled 99.3 25
Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
32c4gijC_
not modelled 94.4 22
PDB header:hydrolase
Chain: C: PDB Molecule:pseudouridine-5'-phosphate glycosidase;
PDBTitle: crystal structure of pseudouridine monophosphate glycosidase complexed2 with sulfate
33d1qpoa2
not modelled 93.3 21
Fold:alpha/beta-Hammerhead
Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like
Family:NadC N-terminal domain-like
34c4ex8A_
not modelled 93.2 21
PDB header:ligase
Chain: A: PDB Molecule:alna;
PDBTitle: crystal structure of the prealnumycin c-glycosynthase alna
35d1vkma_
not modelled 92.7 18
Fold:Indigoidine synthase A-like
Superfamily:Indigoidine synthase A-like
Family:Indigoidine synthase A-like
36d1vf7a_
not modelled 92.4 23
Fold:HlyD-like secretion proteins
Superfamily:HlyD-like secretion proteins
Family:HlyD-like secretion proteins
37c3lnnB_
not modelled 92.2 21
PDB header:metal transport
Chain: B: PDB Molecule:membrane fusion protein (mfp) heavy metal cation efflux
PDBTitle: crystal structure of zneb from cupriavidus metallidurans
38c4l8jA_
not modelled 90.9 15
PDB header:transport protein
Chain: A: PDB Molecule:putative efflux transporter;
PDBTitle: crystal structure of a putative efflux transporter (bacegg_01895) from2 bacteroides eggerthii dsm 20697 at 2.06 a resolution
39c2v4dM_
not modelled 90.5 20
PDB header:membrane protein
Chain: M: PDB Molecule:multidrug resistance protein mexa;
PDBTitle: re-refinement of mexa adaptor protein
40c2gu1A_
not modelled 90.4 18
PDB header:hydrolase
Chain: A: PDB Molecule:zinc peptidase;
PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae
41c2f1mA_
not modelled 90.3 21
PDB header:transport protein
Chain: A: PDB Molecule:acriflavine resistance protein a;
PDBTitle: conformational flexibility in the multidrug efflux system protein acra
42d1o4ua2
not modelled 90.1 19
Fold:alpha/beta-Hammerhead
Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like
Family:NadC N-terminal domain-like
43c5v5sH_
not modelled 89.7 22
PDB header:membrane protein
Chain: H: PDB Molecule:multidrug efflux pump subunit acra;
PDBTitle: multi-drug efflux; membrane transport; rnd superfamily; drug2 resistance
44c3h9iB_
not modelled 88.9 19
PDB header:transport protein
Chain: B: PDB Molecule:cation efflux system protein cusb;
PDBTitle: crystal structure of the membrane fusion protein cusb from escherichia2 coli
45c1t5eB_
not modelled 88.8 17
PDB header:transport protein
Chain: B: PDB Molecule:multidrug resistance protein mexa;
PDBTitle: the structure of mexa
46d1dcza_
not modelled 88.4 27
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
47c5xu0B_
not modelled 87.5 14
PDB header:transport protein
Chain: B: PDB Molecule:membrane-fusion protein;
PDBTitle: structure of the membrane fusion protein spr0693 from streptococcus2 pneumoniae r6
48d1qapa2
not modelled 87.3 19
Fold:alpha/beta-Hammerhead
Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like
Family:NadC N-terminal domain-like
49c3lnnA_
not modelled 86.8 18
PDB header:metal transport
Chain: A: PDB Molecule:membrane fusion protein (mfp) heavy metal cation efflux
PDBTitle: crystal structure of zneb from cupriavidus metallidurans
50c4tkoB_
not modelled 86.7 22
PDB header:membrane protein
Chain: B: PDB Molecule:emra;
PDBTitle: structure of the periplasmic adaptor protein emra
51c5c22A_
not modelled 86.3 24
PDB header:protein transport
Chain: A: PDB Molecule:chromosomal hemolysin d;
PDBTitle: crystal structure of zn-bound hlyd from e. coli
52d2pnrc1
not modelled 85.7 21
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
53c2hsiB_
not modelled 84.8 28
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative peptidase m23;
PDBTitle: crystal structure of putative peptidase m23 from2 pseudomonas aeruginosa, new york structural genomics3 consortium
54c5nilG_
not modelled 84.5 14
PDB header:transport protein
Chain: G: PDB Molecule:macrolide export protein maca;
PDBTitle: structure of the macab-tolc abc-type tripartite multidrug efflux pump-2 macb section
55c2jbmA_
not modelled 84.2 13
PDB header:transferase
Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase;
PDBTitle: qprtase structure from human
56c2q8iB_
not modelled 84.0 25
PDB header:transferase
Chain: B: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase component of
PDBTitle: pyruvate dehydrogenase kinase isoform 3 in complex with antitumor drug2 radicicol
57d1gjxa_
not modelled 83.6 25
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
58d1o78a_
not modelled 83.4 31
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
59c5ks8D_
not modelled 83.4 27
PDB header:ligase
Chain: D: PDB Molecule:pyruvate carboxylase subunit beta;
PDBTitle: crystal structure of two-subunit pyruvate carboxylase from2 methylobacillus flagellatus
60d2gpra_
not modelled 83.3 25
Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
61c2dneA_
not modelled 83.0 17
PDB header:transferase
Chain: A: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase
PDBTitle: solution structure of rsgi ruh-058, a lipoyl domain of2 human 2-oxoacid dehydrogenase
62d1y8ob1
not modelled 82.8 25
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
63c2dncA_
not modelled 82.8 29
PDB header:transferase
Chain: A: PDB Molecule:pyruvate dehydrogenase protein x component;
PDBTitle: solution structure of rsgi ruh-054, a lipoyl domain from2 human 2-oxoacid dehydrogenase
64d1iyua_
not modelled 82.6 17
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
65d1glaf_
not modelled 82.6 25
Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
66d1gpra_
not modelled 82.4 25
Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
67c2ejmA_
not modelled 82.3 17
PDB header:ligase
Chain: A: PDB Molecule:methylcrotonoyl-coa carboxylase subunit alpha;
PDBTitle: solution structure of ruh-072, an apo-biotnyl domain form2 human acetyl coenzyme a carboxylase
68c2yvqA_
not modelled 81.0 16
PDB header:ligase
Chain: A: PDB Molecule:carbamoyl-phosphate synthase;
PDBTitle: crystal structure of mgs domain of carbamoyl-phosphate2 synthetase from homo sapiens
69c2ejgD_
not modelled 80.9 35
PDB header:ligase
Chain: D: PDB Molecule:149aa long hypothetical methylmalonyl-coa decarboxylase
PDBTitle: crystal structure of the biotin protein ligase (mutation r48a) and2 biotin carboxyl carrier protein complex from pyrococcus horikoshii3 ot3
70c2k33A_
not modelled 80.6 22
PDB header:membrane protein, transport protein
Chain: A: PDB Molecule:acra;
PDBTitle: solution structure of an n-glycosylated protein using in2 vitro glycosylation
71d2f3ga_
not modelled 80.6 25
Fold:Barrel-sandwich hybrid
Superfamily:Duplicated hybrid motif
Family:Glucose permease-like
72c3fppB_
not modelled 80.5 16
PDB header:membrane protein
Chain: B: PDB Molecule:macrolide-specific efflux protein maca;
PDBTitle: crystal structure of e.coli maca
73c3sluB_
not modelled 80.4 22
PDB header:hydrolase
Chain: B: PDB Molecule:m23 peptidase domain protein;
PDBTitle: crystal structure of nmb0315
74c4dk0A_
not modelled 80.3 19
PDB header:membrane protein
Chain: A: PDB Molecule:putative maca;
PDBTitle: crystal structure of maca from actinobacillus actinomycetemcomitans
75c3uz0D_
not modelled 80.3 22
PDB header:transport protein
Chain: D: PDB Molecule:stage ii sporulation protein q;
PDBTitle: crystal structure of spoiiiah and spoiiq complex
76d1qjoa_
not modelled 80.0 17
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
77d1k8ma_
not modelled 79.9 9
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
78c2b8gA_
not modelled 79.9 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:biotin/lipoyl attachment protein;
PDBTitle: solution structure of bacillus subtilis blap biotinylated-2 form (energy minimized mean structure)
79c3n6rK_
not modelled 79.6 28
PDB header:ligase
Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit;
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
80c3l0gD_
not modelled 78.6 11
PDB header:transferase
Chain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase;
PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution
81d1laba_
not modelled 78.5 21
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
82c3c2vA_
not modelled 78.2 9
PDB header:transferase
Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase;
PDBTitle: crystal structure of the quinolinate phosphoribosyl transferase (bna6)2 from saccharomyces cerevisiae complexed with prpp and the inhibitor3 phthalate
83d1ghja_
not modelled 78.2 29
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
84c3t51C_
not modelled 77.9 18
PDB header:transport protein
Chain: C: PDB Molecule:cation efflux system protein cusb;
PDBTitle: crystal structures of the pre-extrusion and extrusion states of the2 cusba adaptor-transporter complex
85c2dn8A_
not modelled 77.4 13
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: solution structure of rsgi ruh-053, an apo-biotin carboxy2 carrier protein from human transcarboxylase
86c3tufB_
not modelled 75.6 22
PDB header:signaling protein
Chain: B: PDB Molecule:stage ii sporulation protein q;
PDBTitle: structure of the spoiiq-spoiiiah pore forming complex.
87c4bh5B_
not modelled 74.9 32
PDB header:cell cycle
Chain: B: PDB Molecule:murein hydrolase activator envc;
PDBTitle: lytm domain of envc, an activator of cell wall amidases in2 escherichia coli
88c2l5tA_
not modelled 74.8 27
PDB header:transferase
Chain: A: PDB Molecule:lipoamide acyltransferase;
PDBTitle: solution nmr structure of e2 lipoyl domain from thermoplasma2 acidophilum
89c5b0hB_
not modelled 74.7 23
PDB header:metal binding protein
Chain: B: PDB Molecule:leukocyte cell-derived chemotaxin-2;
PDBTitle: crystal structure of human leukocyte cell-derived chemotaxin 2
90c2m0nA_
not modelled 74.6 23
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: solution structure of a duf3349 annotated protein from mycobacterium2 abscessus, mab_3403c. seattle structural genomics center for3 infectious disease target myaba.17112.a.a2
91d2pa2a1
not modelled 74.3 14
Fold:alpha/beta-Hammerhead
Superfamily:Ribosomal protein L16p/L10e
Family:Ribosomal protein L10e
92c2kccA_
not modelled 74.1 13
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coa carboxylase 2;
PDBTitle: solution structure of biotinoyl domain from human acetyl-2 coa carboxylase 2
93c4dk1B_
not modelled 73.8 14
PDB header:membrane protein
Chain: B: PDB Molecule:putative maca, multidrug resistance protein mexa;
PDBTitle: crystal structure of maca-mexa chimeric protein, containing the2 pseudomonas aeruginosa mexa alpha-hairpin domain.
94c1x1oC_
not modelled 72.4 15
PDB header:transferase
Chain: C: PDB Molecule:nicotinate-nucleotide pyrophosphorylase;
PDBTitle: crystal structure of project id tt0268 from thermus thermophilus hb8
95c2kvcA_
not modelled 71.9 17
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a
96c3pajA_
not modelled 70.5 17
PDB header:transferase
Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase, carboxylating;
PDBTitle: 2.00 angstrom resolution crystal structure of a quinolinate2 phosphoribosyltransferase from vibrio cholerae o1 biovar eltor str.3 n16961
97c5nenA_
not modelled 68.8 29
PDB header:hydrolase
Chain: A: PDB Molecule:lipase c;
PDBTitle: crystal structure of the soluble domain of lipc, a membrane fusion2 protein of a type i secretion system
98d1e2wa2
not modelled 68.5 32
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:Cytochrome f, small domain
99d1bdoa_
not modelled 67.9 18
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
100c2qj8B_
not modelled 67.9 14
PDB header:hydrolase
Chain: B: PDB Molecule:mlr6093 protein;
PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution
101d1ci3m2
not modelled 67.6 37
Fold:Barrel-sandwich hybrid
Superfamily:Rudiment single hybrid motif
Family:Cytochrome f, small domain
102c5bufA_
not modelled 67.6 11
PDB header:transferase
Chain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase;
PDBTitle: 2.37 angstrom structure of epsp synthase from acinetobacter baumannii
103c2b7pA_
not modelled 67.2 18
PDB header:transferase
Chain: A: PDB Molecule:probable nicotinate-nucleotide pyrophosphorylase;
PDBTitle: crystal structure of quinolinic acid phosphoribosyltransferase from2 helicobacter pylori with phthalic acid
104c4rnzA_
not modelled 66.1 22
PDB header:hydrolase
Chain: A: PDB Molecule:conserved hypothetical secreted protein;
PDBTitle: structure of helicobacter pylori csd3 from the hexagonal crystal
105c2qguA_
not modelled 65.5 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:probable signal peptide protein;
PDBTitle: three-dimensional structure of the phospholipid-binding protein from2 ralstonia solanacearum q8xv73_ralsq in complex with a phospholipid at3 the resolution 1.53 a. northeast structural genomics consortium4 target rsr89
106c3tqvA_
not modelled 65.2 13
PDB header:transferase
Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase;
PDBTitle: structure of the nicotinate-nucleotide pyrophosphorylase from2 francisella tularensis.
107c1qapA_
not modelled 64.5 20
PDB header:glycosyltransferase
Chain: A: PDB Molecule:quinolinic acid phosphoribosyltransferase;
PDBTitle: quinolinic acid phosphoribosyltransferase with bound2 quinolinic acid
108c3nyyA_
not modelled 64.4 22
PDB header:hydrolase
Chain: A: PDB Molecule:putative glycyl-glycine endopeptidase lytm;
PDBTitle: crystal structure of a putative glycyl-glycine endopeptidase lytm2 (rumgna_02482) from ruminococcus gnavus atcc 29149 at 1.60 a3 resolution
109c3gnnA_
not modelled 63.4 15
PDB header:transferase
Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase;
PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 burkholderi pseudomallei
110d1pmra_
not modelled 63.1 27
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
111c3fmcC_
not modelled 63.0 29
PDB header:hydrolase
Chain: C: PDB Molecule:putative succinylglutamate desuccinylase / aspartoacylase;
PDBTitle: crystal structure of a putative succinylglutamate desuccinylase /2 aspartoacylase family protein (sama_0604) from shewanella amazonensis3 sb2b at 1.80 a resolution
112c2lkyA_
not modelled 62.4 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b
113c3zf7K_
not modelled 62.2 21
PDB header:ribosome
Chain: K: PDB Molecule:60s ribosomal protein l10, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
114c2jxmB_
not modelled 62.0 19
PDB header:electron transport
Chain: B: PDB Molecule:cytochrome f;
PDBTitle: ensemble of twenty structures of the prochlorothrix2 hollandica plastocyanin- cytochrome f complex
115c4hnvB_
not modelled 61.7 25
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of r54e mutant of s. aureus pyruvate carboxylase
116c3bg5B_
not modelled 61.2 25
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of staphylococcus aureus pyruvate carboxylase
117c3hblA_
not modelled 59.9 25
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of s. aureus pyruvate carboxylase t908a mutant
118c3j39I_
not modelled 59.6 14
PDB header:ribosome
Chain: I: PDB Molecule:60s ribosomal protein l10;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
119c5gt1A_
not modelled 59.6 18
PDB header:choline-binding protein
Chain: A: PDB Molecule:choline binding protein a;
PDBTitle: crystal structure of cbpa from l. salivarius ren
120c5vz0D_
not modelled 59.3 25
PDB header:ligase
Chain: D: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of lactococcus lactis pyruvate carboxylase g746a2 mutant in complex with cyclic-di-amp

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite