Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3316_(sdhC)_3704273_3704611
DateThu Aug 8 16:20:52 BST 2019
Unique Job ID80a451fbfe025daf
SequenceMWSWVCHRIS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:37.566 Y:37.862 Z:54.499
Model (left) based on template d1nekc_
Top template information
Fold:Heme-binding four-helical bundle
Superfamily:Fumarate reductase respiratory complex transmembrane subunits
Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
Confidence and coverage
Confidence:100.0% Coverage: 92%
103 residues ( 92% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1nekc_



100.0 23
Fold:Heme-binding four-helical bundle
Superfamily:Fumarate reductase respiratory complex transmembrane subunits
Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
2c1yq3C_



100.0 21
PDB header:oxidoreductase
Chain: C: PDB Molecule:succinate dehydrogenase cytochrome b, large subunit;
PDBTitle: avian respiratory complex ii with oxaloacetate and ubiquinone
3c3vrbG_



99.9 18
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: G: PDB Molecule:cytochrome b-large subunit;
PDBTitle: mitochondrial rhodoquinol-fumarate reductase from the parasitic2 nematode ascaris suum with the specific inhibitor flutolanil and3 substrate fumarate
4d1nekd_



99.7 21
Fold:Heme-binding four-helical bundle
Superfamily:Fumarate reductase respiratory complex transmembrane subunits
Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
5d2bs2c1



99.1 16
Fold:Heme-binding four-helical bundle
Superfamily:Fumarate reductase respiratory complex transmembrane subunits
Family:Fumarate reductase respiratory complex cytochrome b subunit, FrdC
6c5xmjG_



98.8 14
PDB header:electron transport
Chain: G: PDB Molecule:fumarate reductase respiratory complex;
PDBTitle: crystal structure of quinol:fumarate reductase from desulfovibrio2 gigas
7d1kf6c_



97.6 10
Fold:Heme-binding four-helical bundle
Superfamily:Fumarate reductase respiratory complex transmembrane subunits
Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
8d1kf6d_



97.5 14
Fold:Heme-binding four-helical bundle
Superfamily:Fumarate reductase respiratory complex transmembrane subunits
Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
9d3cx5c2



19.7 12
Fold:Heme-binding four-helical bundle
Superfamily:Transmembrane di-heme cytochromes
Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
10d1q90b_



15.7 12
Fold:Heme-binding four-helical bundle
Superfamily:Transmembrane di-heme cytochromes
Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
11c5mrwL_



11.6 27
PDB header:hydrolase
Chain: L: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
12c6hraD_



11.6 27
PDB header:membrane protein
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: cryo-em structure of the kdpfabc complex in an e1 outward-facing state2 (state 1)
13c6hrbD_



11.6 27
PDB header:membrane protein
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: cryo-em structure of the kdpfabc complex in an e2 inward-facing state2 (state 2)
14c5mrwD_



11.6 27
PDB header:hydrolase
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
15c5mrwH_



11.6 27
PDB header:hydrolase
Chain: H: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
16c1zp0D_



11.4 22
PDB header:oxidoreductase
Chain: D: PDB Molecule:small cytochrome binding protein;
PDBTitle: crystal structure of mitochondrial respiratory complex ii2 bound with 3-nitropropionate and 2-thenoyltrifluoroacetone
17c6et5b_



11.1 24
PDB header:photosynthesis
Chain: B: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
18c1xrdA_



9.0 26
PDB header:membrane protein
Chain: A: PDB Molecule:light-harvesting protein b-880, alpha chain;
PDBTitle: light-harvesting complex 1 alfa subunit from wild-type2 rhodospirillum rubrum
19d1xrda1



9.0 26
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
20d2e74a1



7.8 16
Fold:Heme-binding four-helical bundle
Superfamily:Transmembrane di-heme cytochromes
Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
21c4idxA_



not modelled 7.7 67
PDB header:dna binding protein
Chain: A: PDB Molecule:nucleocapsid protein;
PDBTitle: hexameric crystal structure of schmallenberg virus nucleoprotein
22c3wmmY_



not modelled 7.4 29
PDB header:photosynthesis
Chain: Y: PDB Molecule:lh1 alpha polypeptide;
PDBTitle: crystal structure of the lh1-rc complex from thermochromatium tepidum2 in c2 form
23c4ijsB_



not modelled 6.7 67
PDB header:rna binding protein/rna
Chain: B: PDB Molecule:nucleoprotein;
PDBTitle: crystal structure of nucleocapsid protein encoded by the prototypic2 member of orthobunyavirus
24c5zazA_



not modelled 5.1 13
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin beta-2;
PDBTitle: solution structure of integrin b2 monomer tranmembrane domain in2 bicelle

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below