Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3328c_(sigJ)_3713565_3714503
DateThu Aug 8 16:20:54 BST 2019
Unique Job ID17d68dc4c9c6266d
SequenceMEVSEFEALR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.658 Y:43.401 Z:71.709
Model (left) based on template c5xe7A_
Top template information
PDB header:dna binding protein
Chain: A: PDB Molecule:ecf rna polymerase sigma factor sigj;
PDBTitle: crystal structure of mycobacterium tuberculosis extracytoplasmic2 function sigma factor sigj
Confidence and coverage
Confidence:100.0% Coverage: 89%
277 residues ( 89% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xe7A_
100.0 97
PDB header:dna binding protein
Chain: A: PDB Molecule:ecf rna polymerase sigma factor sigj;
PDBTitle: crystal structure of mycobacterium tuberculosis extracytoplasmic2 function sigma factor sigj
2c3t0yA_
99.9 30
PDB header:transcription regulator/protein binding
Chain: A: PDB Molecule:response regulator;
PDBTitle: structure of the phyr anti-anti-sigma domain bound to the anti-sigma2 factor, nepr
3c2lfwA_
99.9 16
PDB header:signaling protein
Chain: A: PDB Molecule:phyr sigma-like domain;
PDBTitle: nmr structure of the phyrsl-nepr complex from sphingomonas sp. fr1
4c5uxxC_
99.9 19
PDB header:dna binding protein/unknown function
Chain: C: PDB Molecule:rna polymerase sigma factor;
PDBTitle: co-crystal structure of the sigma factor rpoe in complex with the2 anti-sigma factor nepr from bartonella quintana
5c5zx3F_
99.9 21
PDB header:transcription
Chain: F: PDB Molecule:ecf rna polymerase sigma factor sigh;
PDBTitle: mycobacterium tuberculosis rna polymerase holoenzyme with ecf sigma2 factor sigma h
6c6in7B_
99.9 15
PDB header:transcription
Chain: B: PDB Molecule:rna polymerase sigma-h factor;
PDBTitle: crystal structure of algu in complex with muca(cyto)
7c4cxfA_
99.9 25
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor cnrh;
PDBTitle: structure of cnrh in complex with the cytosolic domain of cnry
8c6dvdF_
99.9 26
PDB header:transferase/dna
Chain: F: PDB Molecule:ecf rna polymerase sigma factor sigl;
PDBTitle: crystal structure of mycobacterium tuberculosis transcription2 initiation complex(ecf sigma factor l) with 6 nt spacer and bromine3 labelled in position "-11
9c1or7A_
99.9 19
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma-e factor;
PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea
10c5wurB_
99.9 23
PDB header:metal binding protein
Chain: B: PDB Molecule:ecf rna polymerase sigma factor sigw;
PDBTitle: crystal structure of sigw in complex with its anti-sigma rsiw, an2 oxdized form
11c6c03A_
99.9 27
PDB header:transcription
Chain: A: PDB Molecule:putative rna polymerase ecf-subfamily sigma factor;
PDBTitle: the crystal structure streptomyces venezuelae rsbn-bldn complex
12c5ipmF_
99.9 15
PDB header:transcription, transferase/dna/rna
Chain: F: PDB Molecule:rna polymerase sigma factor rpos;
PDBTitle: sigmas-transcription initiation complex with 4-nt nascent rna
13c2q1zA_
99.9 17
PDB header:transcription
Chain: A: PDB Molecule:rpoe, ecf sige;
PDBTitle: crystal structure of rhodobacter sphaeroides sige in complex with the2 anti-sigma chrr
14c3vdoA_
99.9 16
PDB header:dna binding protein/protein binding
Chain: A: PDB Molecule:rna polymerase sigma factor sigk;
PDBTitle: structure of extra-cytoplasmic function(ecf) sigma factor sigk in2 complex with its negative regulator rska from mycobacterium3 tuberculosis
15c1rp3G_
99.8 16
PDB header:transcription
Chain: G: PDB Molecule:rna polymerase sigma factor sigma-28 (flia);
PDBTitle: cocrystal structure of the flagellar sigma/anti-sigma complex, sigma-2 28/flgm
16c5tw1F_
99.7 19
PDB header:transcription activator/transferase/dna
Chain: F: PDB Molecule:rna polymerase sigma factor siga;
PDBTitle: crystal structure of a mycobacterium smegmatis transcription2 initiation complex with rbpa
17c3mzyA_
99.7 17
PDB header:rna binding protein
Chain: A: PDB Molecule:rna polymerase sigma-h factor;
PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
18c6c05F_
99.7 18
PDB header:transcription
Chain: F: PDB Molecule:rna polymerase sigma factor siga;
PDBTitle: mycobacterium tuberculosis rnap holo/rbpa in relaxed state
19c3wodF_
99.7 13
PDB header:transferase/transcription
Chain: F: PDB Molecule:rna polymerase sigma factor;
PDBTitle: rna polymerase-gp39 complex
20c3n0rA_
99.6 23
PDB header:signaling protein
Chain: A: PDB Molecule:response regulator;
PDBTitle: structure of the phyr stress response regulator at 1.25 angstrom2 resolution
21c1l9uH_
not modelled 99.4 14
PDB header:transcription
Chain: H: PDB Molecule:sigma factor siga;
PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution
22d1or7a2
not modelled 99.4 15
Fold:Sigma2 domain of RNA polymerase sigma factors
Superfamily:Sigma2 domain of RNA polymerase sigma factors
Family:Sigma2 domain of RNA polymerase sigma factors
23c2a6eF_
not modelled 99.4 17
PDB header:transferase
Chain: F: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: crystal structure of the t. thermophilus rna polymerase2 holoenzyme
24d1h3la_
not modelled 99.4 26
Fold:Sigma2 domain of RNA polymerase sigma factors
Superfamily:Sigma2 domain of RNA polymerase sigma factors
Family:Sigma2 domain of RNA polymerase sigma factors
25d1or7b2
not modelled 99.4 17
Fold:Sigma2 domain of RNA polymerase sigma factors
Superfamily:Sigma2 domain of RNA polymerase sigma factors
Family:Sigma2 domain of RNA polymerase sigma factors
26d3en8a1
not modelled 99.3 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Rpa4348-like
27d1nwwa_
not modelled 99.3 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Limonene-1,2-epoxide hydrolase-like
28c2o7gA_
not modelled 99.3 26
PDB header:transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-c factor;
PDBTitle: crystal structure of the pribnow box recognition region of sigc from2 mycobacterium tuberculosis
29c5cxoA_
not modelled 99.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:epoxide hydrolase;
PDBTitle: intriguing role of epoxide hydrolase/cyclase-like enzyme salbiii in2 pyran ring formation in polyether salinomycin
30c3f8xD_
not modelled 99.3 15
PDB header:isomerase
Chain: D: PDB Molecule:putative delta-5-3-ketosteroid isomerase;
PDBTitle: crystal structure of a putative delta-5-3-ketosteroid isomerase2 (eca2236) from pectobacterium atrosepticum scri1043 at 1.55 a3 resolution
31c3hugA_
not modelled 99.3 20
PDB header:transcription/membrane protein
Chain: A: PDB Molecule:rna polymerase sigma factor;
PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
32d3dmca1
not modelled 99.2 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:PhzA/PhzB-like
33c3wmdA_
not modelled 99.2 19
PDB header:isomerase
Chain: A: PDB Molecule:probable monensin biosynthesis isomerase;
PDBTitle: crystal structure of epoxide hydrolase monbi
34c3vepA_
not modelled 99.2 24
PDB header:membrane protein/transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-d factor;
PDBTitle: crystal structure of sigd4 in complex with its negative regulator rsda
35d1ohpa1
not modelled 99.2 20
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
36c3f40A_
not modelled 99.2 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of ntf2-like protein of unknown function2 (yp_677363.1) from cytophaga hutchinsonii atcc 33406 at 1.27 a3 resolution
37d3dm8a1
not modelled 99.2 7
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Rpa4348-like
38c3fh1A_
not modelled 99.2 15
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of a ntf2-like protein of unknown function (mll8193)2 from mesorhizobium loti at 1.60 a resolution
39c1tuhA_
not modelled 99.2 13
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein egc068;
PDBTitle: structure of bal32a from a soil-derived mobile gene cassette
40d1tuha_
not modelled 99.2 13
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Hypothetical protein egc068 from a soil-derived mobile gene cassette
41c2o8xA_
not modelled 99.2 28
PDB header:transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-c factor;
PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc
42d1or7a1
not modelled 99.2 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
43d1rp3a2
not modelled 99.2 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
44d1s7oa_
not modelled 99.2 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
45d2k54a1
not modelled 99.2 13
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Atu0742-like
46c4igcX_
not modelled 99.2 15
PDB header:transcription, transferase
Chain: X: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: x-ray crystal structure of escherichia coli sigma70 holoenzyme
47c5evhA_
not modelled 99.2 18
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of known function protein from kribbella flavida dsm2 17836
48d1oh0a_
not modelled 99.2 12
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
49c3ff2A_
not modelled 99.2 16
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized cystatin fold protein (yp_497570.1) from
PDBTitle: crystal structure of an uncharacterized cystatin fold protein2 (saro_2299) from novosphingobium aromaticivorans dsm at 1.90 a3 resolution
50c1z1sA_
not modelled 99.2 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pa3332;
PDBTitle: crystal structure of putative isomerase pa3332 from2 pseudomonas aeruginosa
51d1z1sa1
not modelled 99.2 17
Fold:Cystatin-like
Superfamily:NTF2-like
Family:PhzA/PhzB-like
52d3ebta1
not modelled 99.2 19
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
53c3msoA_
not modelled 99.2 21
PDB header:isomerase
Chain: A: PDB Molecule:steroid delta-isomerase;
PDBTitle: crystal structure of a steroid delta-isomerase (np_250810.1) from2 pseudomonas aeruginosa at 2.57 a resolution
54c3h3hA_
not modelled 99.1 12
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized snoal-like protein;
PDBTitle: crystal structure of a snoal-like protein of unknown function2 (bth_ii0226) from burkholderia thailandensis e264 at 1.60 a3 resolution
55d3ec9a1
not modelled 99.1 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:PhzA/PhzB-like
56c4lmiA_
not modelled 99.1 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of putative ketosteroid isomerase from kribbella2 flavida dsm 17836
57d1xsva_
not modelled 99.1 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:YlxM/p13-like
58c6d34B_
not modelled 99.1 19
PDB header:biosynthetic protein
Chain: B: PDB Molecule:terc;
PDBTitle: apo crystal structure of terc, a terfestatin biosynthesis enzyme
59c4h3uB_
not modelled 99.1 16
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of hypothetical protein with ketosteroid isomerase-2 like protein fold from catenulispora acidiphila dsm 44928
60d2a15a1
not modelled 99.1 13
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
61c5fgmA_
not modelled 99.1 21
PDB header:hydrolase
Chain: A: PDB Molecule:ecf rna polymerase sigma factor sigr;
PDBTitle: streptomyces coelicolor sigr region 4
62d2bnga1
not modelled 99.1 17
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Limonene-1,2-epoxide hydrolase-like
63d1s5aa_
not modelled 99.1 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:PhzA/PhzB-like
64c6a5hB_
not modelled 99.0 14
PDB header:biosynthetic protein
Chain: B: PDB Molecule:101015d;
PDBTitle: the structure of [4+2] and [6+4] cyclase in the biosynthetic pathway2 of unidentified natural product
65c4u13B_
not modelled 99.0 18
PDB header:transferase
Chain: B: PDB Molecule:putative polyketide cyclase sma1630;
PDBTitle: crystal structure of putative polyketide cyclase (protein sma1630)2 from sinorhizobium meliloti at 2.3 a resolution
66c4kvhA_
not modelled 99.0 16
PDB header:unknown function
Chain: A: PDB Molecule:ketosteroid isomerase fold protein hmuk_0747;
PDBTitle: crystal structure of ketosteroid isomerase fold protein hmuk_0747
67c3fgyB_
not modelled 99.0 14
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of a ntf2-like protein (bxe_b1094) from burkholderia2 xenovorans lb400 at 1.59 a resolution
68c3fljA_
not modelled 99.0 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein conserved in bacteria with a
PDBTitle: crystal structure of uncharacterized protein conserved in bacteria2 with a cystatin-like fold (yp_168589.1) from silicibacter pomeroyi3 dss-3 at 2.00 a resolution
69d1smyf2
not modelled 99.0 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
70c3f14A_
not modelled 99.0 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of ntf2-like protein of unknown function2 (yp_680363.1) from cytophaga hutchinsonii atcc 33406 at 1.45 a3 resolution
71c4qicC_
not modelled 99.0 19
PDB header:signaling protein/dna binding protein
Chain: C: PDB Molecule:sensory transduction regulatory protein, anti-anti-sigma
PDBTitle: co-crystal structure of anti-anti-sigma factor phyr complexed with2 anti-sigma factor nepr from bartonella quintana
72c3k0zB_
not modelled 98.9 13
PDB header:lyase
Chain: B: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of putative polyketide cyclase (np_977253.1) from2 bacillus cereus atcc 10987 at 1.91 a resolution
73c3b4oB_
not modelled 98.9 13
PDB header:biosynthetic protein
Chain: B: PDB Molecule:phenazine biosynthesis protein a/b;
PDBTitle: crystal structure of phenazine biosynthesis protein phza/b2 from burkholderia cepacia r18194, apo form
74c3f8hA_
not modelled 98.9 20
PDB header:unknown function
Chain: A: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (tm1040_3560) from2 silicibacter sp. tm1040 at 2.00 a resolution
75c3iydF_
not modelled 98.9 14
PDB header:transcription/dna
Chain: F: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
76d1ttya_
not modelled 98.9 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
77c3g8zA_
not modelled 98.9 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein of unknown function with cystatin-like fold;
PDBTitle: crystal structure of protein of unknown function with cystatin-like2 fold (np_639274.1) from xanthomonas campestris at 1.90 a resolution
78c5aiiP_
not modelled 98.9 24
PDB header:hydrolase
Chain: P: PDB Molecule:limonene-1,2-epoxide hydrolase;
PDBTitle: discovery and characterization of thermophilic limonene-1,2-epoxide2 hydrolases from hot spring metagenomic libraries.3 ch55-sample-peg complex
79d2f99a1
not modelled 98.9 17
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
80c3hk4B_
not modelled 98.9 15
PDB header:lyase
Chain: B: PDB Molecule:mlr7391 protein;
PDBTitle: crystal structure of a putative snoal-like polyketide cyclase2 [carbohydrate phosphatase] (mlr7391) from mesorhizobium loti at 1.963 a resolution
81d1sjwa_
not modelled 98.8 17
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
82c3i0yC_
not modelled 98.8 22
PDB header:isomerase
Chain: C: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (xcc0381) from2 xanthomonas campestris pv. campestris at 1.50 a resolution
83c5aigA_
not modelled 98.8 17
PDB header:hydrolase
Chain: A: PDB Molecule:limonene-1,2-epoxide hydrolase;
PDBTitle: discovery and characterization of thermophilic limonene-1,2-epoxide2 hydrolases from hot spring metagenomic libraries. tomsk-sample-3 valpromide complex
84d3dxoa1
not modelled 98.8 15
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Atu0744-like
85d1m98a2
not modelled 98.8 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Orange carotenoid protein, C-terminal domain
86c3rgaA_
not modelled 98.8 19
PDB header:isomerase
Chain: A: PDB Molecule:epoxide hydrolase;
PDBTitle: crystal structure of epoxide hydrolase for polyether lasalocid a2 biosynthesis
87c3ff0A_
not modelled 98.8 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:phenazine biosynthesis protein phzb 2;
PDBTitle: crystal structure of a phenazine biosynthesis-related protein (phzb2)2 from pseudomonas aeruginosa at 1.90 a resolution
88c4lgqA_
not modelled 98.8 19
PDB header:lyase
Chain: A: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (cv_0247) from2 chromobacterium violaceum atcc 12472 at 2.72 a resolution
89d1ku7a_
not modelled 98.7 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
90c3f7xA_
not modelled 98.7 20
PDB header:unknown function
Chain: A: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (pp0894) from2 pseudomonas putida kt2440 at 1.24 a resolution
91d2geya1
not modelled 98.7 19
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
92c3f9sB_
not modelled 98.7 11
PDB header:lyase
Chain: B: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (lferr_0659) from2 acidithiobacillus ferrooxidans atcc at 1.76 a resolution
93c6fejA_
not modelled 98.7 10
PDB header:photosynthesis
Chain: A: PDB Molecule:all4940 protein;
PDBTitle: anabaena apo-c-terminal domain homolog protein
94d1ku3a_
not modelled 98.7 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
95c3grdA_
not modelled 98.7 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-superfamily protein;
PDBTitle: crystal structure of ntf2-superfamily protein with unknown function2 (np_977240.1) from bacillus cereus atcc 10987 at 1.25 a resolution
96d2gexa1
not modelled 98.6 23
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SnoaL-like polyketide cyclase
97c3g0kA_
not modelled 98.6 14
PDB header:ca-binding protein
Chain: A: PDB Molecule:putative membrane protein;
PDBTitle: crystal structure of a protein of unknown function with a cystatin-2 like fold (saro_2880) from novosphingobium aromaticivorans dsm at3 1.30 a resolution
98c3t72o_
not modelled 98.6 19
PDB header:transcription/dna
Chain: O: PDB Molecule:pho box dna (strand 1);
PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex
99c5x9jB_
not modelled 98.6 10
PDB header:isomerase
Chain: B: PDB Molecule:prhc;
PDBTitle: strucutre of prhc from penicillium brasilianum nbrc 6234
100c3h51A_
not modelled 98.6 17
PDB header:protein binding
Chain: A: PDB Molecule:putative calcium/calmodulin dependent protein kinase ii
PDBTitle: crystal structure of putative calcium/calmodulin dependent protein2 kinase ii association domain (np_636218.1) from xanthomonas3 campestris at 1.70 a resolution
101c3ke7A_
not modelled 98.6 14
PDB header:isomerase
Chain: A: PDB Molecule:putative ketosteroid isomerase;
PDBTitle: crystal structure of putative ketosteroid isomerase (yp_001303366.1)2 from parabacteroides distasonis atcc 8503 at 1.45 a resolution
102d2p7vb1
not modelled 98.5 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
103c3ehcA_
not modelled 98.5 10
PDB header:unknown function
Chain: A: PDB Molecule:snoal-like polyketide cyclase;
PDBTitle: crystal structure of a snoal-like polyketide cyclase (atu3018) from2 agrobacterium tumefaciens str. c58 at 2.12 a resolution
104d1rp3a3
not modelled 98.5 13
Fold:Sigma2 domain of RNA polymerase sigma factors
Superfamily:Sigma2 domain of RNA polymerase sigma factors
Family:Sigma2 domain of RNA polymerase sigma factors
105c5x7lA_
not modelled 98.4 20
PDB header:isomerase
Chain: A: PDB Molecule:tsrd;
PDBTitle: structure of tsrd from streptomyces laurentii
106c3kkgA_
not modelled 98.3 22
PDB header:lyase
Chain: A: PDB Molecule:putative snoal-like polyketide cyclase;
PDBTitle: crystal structure of putative snoal-like polyketide cyclase2 (yp_509242.1) from jannaschia sp. ccs1 at 1.40 a resolution
107d1yioa1
not modelled 98.2 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators)
108c5x9kA_
not modelled 98.1 11
PDB header:isomerase
Chain: A: PDB Molecule:austinol synthesis protein h;
PDBTitle: strucutre of aush from aspergillus nidulans
109c5wqhE_
not modelled 98.1 8
PDB header:isomerase
Chain: E: PDB Molecule:isomerase trt14;
PDBTitle: structure of fungal meroterpenoid isomerase trt14 complexed with2 substrate analog and endo-terretonin d
110c3qp5C_
not modelled 98.1 18
PDB header:transcription
Chain: C: PDB Molecule:cvir transcriptional regulator;
PDBTitle: crystal structure of cvir bound to antagonist chlorolactone (cl)
111c3f7sA_
not modelled 98.1 9
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of a ntf2-like protein of unknown function (pp_4556)2 from pseudomonas putida kt2440 at 2.11 a resolution
112c3sztB_
not modelled 98.0 11
PDB header:transcription
Chain: B: PDB Molecule:quorum-sensing control repressor;
PDBTitle: quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone
113c3robC_
not modelled 98.0 17
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved protein from planctomyces2 limnophilus dsm 3776
114c4lfuA_
not modelled 98.0 16
PDB header:dna binding protein
Chain: A: PDB Molecule:regulatory protein sdia;
PDBTitle: crystal structure of escherichia coli sdia in the space group c2
115c3hx8A_
not modelled 98.0 15
PDB header:isomerase
Chain: A: PDB Molecule:putative ketosteroid isomerase;
PDBTitle: crystal structure of putative ketosteroid isomerase (np_103587.1) from2 mesorhizobium loti at 1.45 a resolution
116d2rcda1
not modelled 98.0 14
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BxeB1374-like
117c3gwrA_
not modelled 98.0 12
PDB header:protein binding
Chain: A: PDB Molecule:putative calcium/calmodulin-dependent protein kinase type
PDBTitle: crystal structure of putative calcium/calmodulin-dependent protein2 kinase type ii association domain (yp_315894.1) from thiobacillus3 denitrificans atcc 25259 at 2.00 a resolution
118c1x3uA_
not modelled 97.9 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein fixj;
PDBTitle: solution structure of the c-terminal transcriptional2 activator domain of fixj from sinorhizobium melilot
119c2q0oA_
not modelled 97.9 15
PDB header:transcription
Chain: A: PDB Molecule:probable transcriptional activator protein trar;
PDBTitle: crystal structure of an anti-activation complex in bacterial quorum2 sensing
120d3cu3a1
not modelled 97.9 12
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BaiE/LinA-like

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite