Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3335c_(-)_3721902_3722771
DateThu Aug 8 16:20:54 BST 2019
Unique Job ID902463cd788db15c
SequenceMGELAEPGVL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.836 Y:44.381 Z:25.830
Model (left) based on template d2r6gf1
Top template information
Fold:MalF N-terminal region-like
Superfamily:MalF N-terminal region-like
Family:MalF N-terminal region-like
Confidence and coverage
Confidence: 51.3% Coverage: 20%
57 residues ( 20% of your sequence) have been modelled with 51.3% confidence by the single highest scoring template.
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2r6gf1



51.3 16
Fold:MalF N-terminal region-like
Superfamily:MalF N-terminal region-like
Family:MalF N-terminal region-like
2c5mb9C_



19.8 31
PDB header:chaperone
Chain: C: PDB Molecule:putative ribosome associated protein;
PDBTitle: crystal structure of the eukaryotic ribosome associated complex (rac),2 a unique hsp70/hsp40 pair
3c2qksA_



19.4 13
PDB header:metal transport
Chain: A: PDB Molecule:kir3.1-prokaryotic kir channel chimera;
PDBTitle: crystal structure of a kir3.1-prokaryotic kir channel chimera
4c5mb9D_



18.5 31
PDB header:chaperone
Chain: D: PDB Molecule:putative ribosome associated protein;
PDBTitle: crystal structure of the eukaryotic ribosome associated complex (rac),2 a unique hsp70/hsp40 pair
5c1xl6B_



15.6 8
PDB header:metal transport
Chain: B: PDB Molecule:inward rectifier potassium channel;
PDBTitle: intermediate gating structure 2 of the inwardly rectifying k+ channel2 kirbac3.1
6d1aila_



10.1 38
Fold:S15/NS1 RNA-binding domain
Superfamily:S15/NS1 RNA-binding domain
Family:N-terminal, RNA-binding domain of nonstructural protein NS1
7c4atbC_



9.5 29
PDB header:immune system
Chain: C: PDB Molecule:interleukin enhancer-binding factor 2;
PDBTitle: crystal structure of the nf90-nf45 dimerisation domain2 complex with ctp
8c5ec0A_



9.1 35
PDB header:structural protein
Chain: A: PDB Molecule:alp7a;
PDBTitle: crystal structure of actin-like protein alp7a
9d2h9da1



9.0 19
Fold:Chorismate mutase II
Superfamily:Chorismate mutase II
Family:Dimeric chorismate mutase
10c5lnkW_



8.8 15
PDB header:oxidoreductase
Chain: W: PDB Molecule:mitochondrial complex i, sgdh subunit;
PDBTitle: entire ovine respiratory complex i
11c4o9lA_



8.8 29
PDB header:antiviral protein
Chain: A: PDB Molecule:mitochondrial antiviral signaling protein (mavs);
PDBTitle: crystal structure of horse mavs card domain mutant e26r
12c6cfwD_



8.6 11
PDB header:membrane protein
Chain: D: PDB Molecule:mbh subunit;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
13c1w8xP_



8.6 12
PDB header:virus
Chain: P: PDB Molecule:protein p16;
PDBTitle: structural analysis of prd1
14c1p0lA_



8.3 14
PDB header:ribosome
Chain: A: PDB Molecule:19-mer peptide from 50s ribosomal protein l1;
PDBTitle: hp (2-20) substitution gln to trp modification in sds-d252 micelles
15c5lnk2_



7.9 22
PDB header:oxidoreductase
Chain: 2: PDB Molecule:mitochondrial complex i, 24 kda subunit;
PDBTitle: entire ovine respiratory complex i
16c4z3pA_



7.8 13
PDB header:transport protein
Chain: A: PDB Molecule:putative drug/sodium antiporter;
PDBTitle: mate transporter clbm in complex with rb+
17c2m6xC_



7.7 23
PDB header:membrane protein
Chain: C: PDB Molecule:p7;
PDBTitle: structure of the p7 channel of hepatitis c virus, genotype 5a
18c4iu8A_



7.5 4
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter (selenomethionine2 derivative)
19c3p5nA_



7.4 4
PDB header:transport protein
Chain: A: PDB Molecule:riboflavin uptake protein;
PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter
20c5kq4C_



7.1 25
PDB header:hydrolase
Chain: C: PDB Molecule:proline-rich nuclear receptor coactivator 2;
PDBTitle: crystal structure of s. pombe dcp1/dcp2 in complex with h. sapiens2 pnrc2 and synthetic cap analog
21c2f8xM_



not modelled 7.1 56
PDB header:transcription/dna
Chain: M: PDB Molecule:mastermind-like protein 1;
PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence
22d2hwna1



not modelled 7.1 15
Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
23c2kpmA_



not modelled 7.1 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of uncharacterized protein from gene2 locus ne0665 of nitrosomonas europaea. northeast structural3 genomics target ner103a
24c3ixzB_



not modelled 7.1 5
PDB header:hydrolase
Chain: B: PDB Molecule:potassium-transporting atpase subunit beta;
PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride
25c2l16A_



not modelled 6.9 14
PDB header:protein transport
Chain: A: PDB Molecule:sec-independent protein translocase protein tatad;
PDBTitle: solution structure of bacillus subtilits tatad protein in dpc micelles
26d1vk3a4



not modelled 6.8 10
Fold:PurM C-terminal domain-like
Superfamily:PurM C-terminal domain-like
Family:PurM C-terminal domain-like
27c4rp9A_



not modelled 6.8 12
PDB header:membrane protein
Chain: A: PDB Molecule:ascorbate-specific permease iic component ulaa;
PDBTitle: bacterial vitamin c transporter ulaa/sgat in c2 form
28c1cdlG_



not modelled 6.7 29
PDB header:calcium-binding protein
Chain: G: PDB Molecule:calcium/calmodulin-dependent protein kinase type
PDBTitle: target enzyme recognition by calmodulin: 2.4 angstroms2 structure of a calmodulin-peptide complex
29c1cdlF_



not modelled 6.7 29
PDB header:calcium-binding protein
Chain: F: PDB Molecule:calcium/calmodulin-dependent protein kinase type
PDBTitle: target enzyme recognition by calmodulin: 2.4 angstroms2 structure of a calmodulin-peptide complex
30c1cdlE_



not modelled 6.7 29
PDB header:calcium-binding protein
Chain: E: PDB Molecule:calcium/calmodulin-dependent protein kinase type
PDBTitle: target enzyme recognition by calmodulin: 2.4 angstroms2 structure of a calmodulin-peptide complex
31d1rh1a1



not modelled 6.7 18
Fold:Cloacin translocation domain
Superfamily:Cloacin translocation domain
Family:Cloacin translocation domain
32c1rh1A_



not modelled 6.6 18
PDB header:antibiotic
Chain: A: PDB Molecule:colicin b;
PDBTitle: crystal structure of the cytotoxic bacterial protein2 colicin b at 2.5 a resolution
33c2ht2B_



not modelled 6.5 9
PDB header:membrane protein
Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca;
PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex
34c2o5gB_



not modelled 6.3 29
PDB header:metal binding protein
Chain: B: PDB Molecule:smooth muscle myosin light chain kinase peptide;
PDBTitle: calmodulin-smooth muscle light chain kinase peptide complex
35c2lzlB_



not modelled 6.2 31
PDB header:membrane protein
Chain: B: PDB Molecule:fibroblast growth factor receptor 3;
PDBTitle: fgfr3tm
36d2as0a1



not modelled 6.1 0
Fold:PUA domain-like
Superfamily:PUA domain-like
Family:Hypothetical RNA methyltransferase domain (HRMD)
37c6n10A_



not modelled 6.1 15
PDB header:lyase
Chain: A: PDB Molecule:diphosphomevalonate decarboxylase mvd1, peroxisomal;
PDBTitle: crystal structure of arabidopsis thaliana mevalonate 5-diphosphate2 decarboxylase 1 complexed with (r)-mvapp
38d1r2aa_



not modelled 6.1 15
Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
39d2ca5a1



not modelled 6.0 14
Fold:Long alpha-hairpin
Superfamily:MxiH-like
Family:MxiH-like
40c1hgzA_



not modelled 6.0 21
PDB header:virus
Chain: A: PDB Molecule:ph75 inovirus major coat protein;
PDBTitle: filamentous bacteriophage ph75
41c1qtxB_



not modelled 5.9 29
PDB header:signaling protein
Chain: B: PDB Molecule:protein (rs20);
PDBTitle: the 1.65 angstrom structure of calmodulin rs20 peptide2 complex
42c5ojyA_



not modelled 5.9 14
PDB header:transcription
Chain: A: PDB Molecule:tetr family transcription regulator;
PDBTitle: co-complex structure of regulator protein 2 (pamr2) with pamamycin 6072 from streptomyces alboniger
43c3f5tA_



not modelled 5.7 43
PDB header:viral protein
Chain: A: PDB Molecule:nonstructural protein 1;
PDBTitle: x-ray structure of h5n1 ns1
44c6bhuA_



not modelled 5.5 7
PDB header:transport protein
Chain: A: PDB Molecule:multidrug resistance-associated protein 1;
PDBTitle: cryo-em structure of atp-bound, outward-facing bovine multidrug2 resistance protein 1 (mrp1)
45c4od5C_



not modelled 5.4 14
PDB header:transferase
Chain: C: PDB Molecule:4-hydroxybenzoate octaprenyltransferase;
PDBTitle: substrate-bound structure of a ubia homolog from aeropyrum pernix k1
46c2v6lI_



not modelled 5.3 13
PDB header:protein transport
Chain: I: PDB Molecule:mxih;
PDBTitle: molecular model of a type iii secretion system needle
47c4wxmD_



not modelled 5.3 40
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator fleq;
PDBTitle: fleq rec domain from pseudomonas aeruginosa pao1
48c4fp9B_



not modelled 5.3 21
PDB header:transferase
Chain: B: PDB Molecule:mterf domain-containing protein 2;
PDBTitle: human mterf4-nsun4 protein complex
49d1e3ha5



not modelled 5.2 15
Fold:Ribonuclease PH domain 2-like
Superfamily:Ribonuclease PH domain 2-like
Family:Ribonuclease PH domain 2-like
50c2hkeB_



not modelled 5.2 10
PDB header:lyase
Chain: B: PDB Molecule:diphosphomevalonate decarboxylase, putative;
PDBTitle: mevalonate diphosphate decarboxylase from trypanosoma brucei
51c1fi4A_



not modelled 5.2 13
PDB header:lyase
Chain: A: PDB Molecule:mevalonate 5-diphosphate decarboxylase;
PDBTitle: the x-ray crystal structure of mevalonate 5-diphosphate decarboxylase2 at 2.3 angstrom resolution.
52d1lq1a_



not modelled 5.2 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:Spo0A
53c3j9pD_



not modelled 5.2 8
PDB header:transport protein
Chain: D: PDB Molecule:maltose-binding periplasmic protein, transient receptor
PDBTitle: structure of the trpa1 ion channel determined by electron cryo-2 microscopy
54c5lc5m_



not modelled 5.1 14
PDB header:oxidoreductase
Chain: M: PDB Molecule:nadh-ubiquinone oxidoreductase chain 4;
PDBTitle: structure of mammalian respiratory complex i, class2

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below