Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3354_(-)_3769282_3769671
DateThu Aug 8 16:20:56 BST 2019
Unique Job IDf1b1a1d65b06167c
SequenceMNLRRHQTLT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:16.823 Y:21.303 Z:25.482
Model (left) based on template d2csua3
Top template information
Fold:Flavodoxin-like
Superfamily:Succinyl-CoA synthetase domains
Family:Succinyl-CoA synthetase domains
Confidence and coverage
Confidence: 31.0% Coverage: 21%
27 residues ( 21% of your sequence) have been modelled with 31.0% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2csua3



31.0 22
Fold:Flavodoxin-like
Superfamily:Succinyl-CoA synthetase domains
Family:Succinyl-CoA synthetase domains
2c6c3rB_



27.2 14
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
3d1mkea1



19.5 22
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
4c5uqdA_



15.5 35
PDB header:oxidoreductase
Chain: A: PDB Molecule:dumpy: shorter than wild-type;
PDBTitle: dpy-21 in complex with fe(ii) and alpha-ketoglutarate
5c2ifsA_



11.6 22
PDB header:signaling protein
Chain: A: PDB Molecule:wiskott-aldrich syndrome protien interacting protein and
PDBTitle: structure of the n-wasp evh1 domain in complex with an extended wip2 peptide
6c1vjqB_



10.8 16
PDB header:structural genomics, de novo protein
Chain: B: PDB Molecule:designed protein;
PDBTitle: designed protein based on backbone conformation of2 procarboxypeptidase-a (1aye) with sidechains chosen for maximal3 predicted stability.
7d1zara1



9.7 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Rio2 serine protein kinase N-terminal domain
8c2lweA_



9.2 13
PDB header:signaling protein
Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx58;
PDBTitle: solution structure of mutant (t170e) second card of human rig-i
9c4rl6A_



8.1 43
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q04l03_strp2 protein from streptococcus2 pneumoniae. northeast structural genomics consortium target spr105
10c4inaA_



7.9 36
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q7mss8_wolsu protein from wolinella2 succinogenes. northeast structural genomics consortium target wsr35
11d1xoda1



7.5 23
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
12c5tchG_



7.5 36
PDB header:lyase
Chain: G: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase from m. tuberculosis -2 ligand-free form, trpa-g66v mutant
13c2hjmB_



7.2 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein pf1176;
PDBTitle: crystal structure of a singleton protein pf1176 from p. furiosus
14c3ss4C_



6.7 44
PDB header:hydrolase
Chain: C: PDB Molecule:glutaminase c;
PDBTitle: crystal structure of mouse glutaminase c, phosphate-bound form
15c5k9xA_



6.6 14
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha chain from legionella2 pneumophila subsp. pneumophila
16d2j9ga2



6.5 11
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
17d1ulza2



6.2 15
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
18c4ph2A_



6.0 46
PDB header:viral protein
Chain: A: PDB Molecule:blv capsid - n-terminal domain;
PDBTitle: mature n-terminal domain of capsid protein from bovine leukemia virus
19c6a0aA_



5.8 50
PDB header:structural protein
Chain: A: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
20d1eucb1



5.7 19
Fold:Flavodoxin-like
Superfamily:Succinyl-CoA synthetase domains
Family:Succinyl-CoA synthetase domains
21c1pemA_



not modelled 5.7 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase 2 alpha
PDBTitle: ribonucleotide reductase protein r1e from salmonella2 typhimurium
22c5dggB_



not modelled 5.7 36
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: central domain of uncharacterized lpg1148 protein from legionella2 pneumophila
23c2v75A_



not modelled 5.6 13
PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein nab2;
PDBTitle: n-terminal domain of nab2
24c6a0aB_



not modelled 5.4 50
PDB header:structural protein
Chain: B: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
25c6a0aC_



not modelled 5.4 50
PDB header:structural protein
Chain: C: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii
26c6cgmA_



not modelled 5.4 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase;
PDBTitle: x-ray crystal structure of bacillus subtilis ribonucleotide reductase2 nrde alpha subunit (nucleotide free)
27c5us3A_



not modelled 5.3 75
PDB header:de novo protein
Chain: A: PDB Molecule:heterogeneous-backbone variant of the sp1-3 zinc finger: n-
PDBTitle: heterogeneous-backbone foldamer mimic of the sp1-3 zinc finger
28d1w2za3



not modelled 5.1 22
Fold:Cystatin-like
Superfamily:Amine oxidase N-terminal region
Family:Amine oxidase N-terminal region
29d1a6qa1



not modelled 5.0 45
Fold:Another 3-helical bundle
Superfamily:Protein serine/threonine phosphatase 2C, C-terminal domain
Family:Protein serine/threonine phosphatase 2C, C-terminal domain

Binding site prediction 

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