Phyre 2 Results for RVBD3355c_(-)_3769685

Email	mdejesus@rockefeller.edu
Description	RVBD3355c_(-)_3769685_3769978
Date	Thu Aug 8 16:20:57 BST 2019
Unique Job ID	95251c4b6fbddd6a
Sequence	MTVRAVFRRT ... Download FASTA
Job Type	normal
Job Expiry

Summary

Top model

Image coloured by rainbow N → C terminus

Model dimensions (Å):

X:29.859 Y:12.772 Z:28.963

Model (left) based on template c2micA_

Top template information

PDB header:membrane protein
Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily member 16;
PDBTitle: nmr structure of p75 transmembrane domain in dpc micelles

Confidence and coverage

Confidence:

8.5%

Coverage:

22%

21 residues ( 22% of your sequence) have been modelled with 8.5% confidence by the single highest scoring template.

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3D viewing

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Sequence analysis

Download FASTA version

Secondary structure and disorder prediction [Show]

Domain analysis [Show]

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence	M	T	V	R	A	V	F	R	R	T	V	G	A	Q	W	P	I	L	L	V	G	S	I	F	A	V	G	F	V	L	A	G	A	N	F	W	R	R	G	A	L	L	I	G	I	G	V	G	V	A	A	V	L	R	L	V	L	S	E	E
Secondary structure
SS confidence
Disorder	?	?	?	?
Disorder confidence

	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Sequence	R	A	G	L	L	V	V	R	S	K	G	I	D	F	V	T	T	V	T	V	A	A	A	M	V	Y	I	A	S	T	I	D	P	L	G	T	G
Secondary structure
SS confidence
Disorder																																?	?	?	?	?	?
Disorder confidence

PDB 2mic chain A

PDB 2mic chain B

PDB 5nf8 chain A

PDB 2ouf chain A domain 1

PDB 3jbr chain E