Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3368c_(-)_3780515_3781159
DateFri Aug 9 18:20:03 BST 2019
Unique Job ID8519d0cdb3402053
SequenceMTLNLSVDEV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.426 Y:50.855 Z:48.611
Model (left) based on template d1zcha1
Top template information
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
Confidence and coverage
Confidence:100.0% Coverage: 87%
187 residues ( 87% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1zcha1
100.0 21
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
2c2islB_
100.0 24
PDB header:flavoprotein
Chain: B: PDB Molecule:blub;
PDBTitle: blub bound to reduced flavin (fmnh2) and molecular oxygen.2 (clear crystal form)
3c5heiE_
100.0 18
PDB header:oxidoreductase
Chain: E: PDB Molecule:nfra2;
PDBTitle: structure of b. megaterium nfra2
4c5hdjA_
100.0 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:nfra1;
PDBTitle: structure of b. megaterium nfra1
5c3gr3B_
100.0 22
PDB header:flavoprotein
Chain: B: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a nitroreductase-like family protein (pnba,2 bh06130) from bartonella henselae str. houston-1 at 1.45 a resolution
6c3n2sD_
100.0 22
PDB header:oxidoreductase
Chain: D: PDB Molecule:nadph-dependent nitro/flavin reductase;
PDBTitle: structure of nfra1 nitroreductase from b. subtilis
7c3eofB_
100.0 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of putative oxidoreductase (yp_213212.1) from2 bacteroides fragilis nctc 9343 at 1.99 a resolution
8c4eo3A_
100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:bacterioferritin comigratory protein/nadh dehydrogenase;
PDBTitle: peroxiredoxin nitroreductase fusion enzyme
9d1f5va_
100.0 17
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
10c2wzvB_
100.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:nfnb protein;
PDBTitle: crystal structure of the fmn-dependent nitroreductase nfnb2 from mycobacterium smegmatis
11d1bkja_
100.0 20
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
12c4dn2A_
100.0 29
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of putative nitroreductase from geobacter2 metallireducens gs-15
13c4xomB_
100.0 25
PDB header:unknown function
Chain: B: PDB Molecule:coenzyme f420:l-glutamate ligase;
PDBTitle: coenzyme f420:l-glutamate ligase (fbib) from mycobacterium2 tuberculosis (c-terminal domain).
14d2ifaa1
100.0 14
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
15c3gbhC_
100.0 19
PDB header:oxidoreductase
Chain: C: PDB Molecule:nad(p)h-flavin oxidoreductase;
PDBTitle: crystal structure of a putative nad(p)h:fmn oxidoreductase (se1966)2 from staphylococcus epidermidis atcc 12228 at 2.00 a resolution
16c3ge6B_
100.0 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (exig_2970) from exiguobacterium sibiricum 255-15 at 1.85 a3 resolution
17c3eo8A_
100.0 23
PDB header:flavoprotein
Chain: A: PDB Molecule:blub-like flavoprotein;
PDBTitle: crystal structure of blub-like flavoprotein (yp_001089088.1) from2 clostridium difficile 630 at 1.74 a resolution
18c4qlyB_
100.0 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:enone reductase cla-er;
PDBTitle: crystal structure of cla-er, a novel enone reductase catalyzing a key2 step of a gut-bacterial fatty acid saturation metabolism,3 biohydrogenation
19d1vfra_
100.0 21
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
20d1ykia1
100.0 23
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
21c6czpH_
not modelled 100.0 21
PDB header:oxidoreductase
Chain: H: PDB Molecule:oxygen-insensitive nad(p)h nitroreductase;
PDBTitle: 2.2 angstrom resolution crystal structure oxygen-insensitive nad(p)h-2 dependent nitroreductase nfsb from vibrio vulnificus in complex with3 fmn
22c3k6hB_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of a nitroreductase family protein from2 agrobacterium tumefaciens str. c58
23c3bemA_
not modelled 100.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h nitroreductase ydfn;
PDBTitle: crystal structure of putative nitroreductase ydfn (2632848) from2 bacillus subtilis at 1.65 a resolution
24c3gh8A_
not modelled 100.0 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:iodotyrosine dehalogenase 1;
PDBTitle: crystal structure of mus musculus iodotyrosine deiodinase (iyd) bound2 to fmn and di-iodotyrosine (dit)
25d1ywqa1
not modelled 100.0 19
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
26c5ko8B_
not modelled 100.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of haliscomenobacter hydrossis iodotyrosine2 deiodinase (iyd) bound to fmn and mono-iodotyrosine (i-tyr)
27c2hayD_
not modelled 100.0 14
PDB header:oxidoreductase
Chain: D: PDB Molecule:putative nad(p)h-flavin oxidoreductase;
PDBTitle: the crystal structure of the putative nad(p)h-flavin oxidoreductase2 from streptococcus pyogenes m1 gas
28d1kqba_
not modelled 100.0 18
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
29d2frea1
not modelled 100.0 21
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
30c3kwkA_
not modelled 100.0 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nadh dehydrogenase/nad(p)h nitroreductase;
PDBTitle: crystal structure of putative nadh dehydrogenase/nad(p)h2 nitroreductase (np_809094.1) from bacteroides thetaiotaomicron vpi-3 5482 at 1.54 a resolution
31c3of4A_
not modelled 100.0 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a fmn/fad- and nad(p)h-dependent nitroreductase2 (nfnb, il2077) from idiomarina loihiensis l2tr at 1.90 a resolution
32c3m5kA_
not modelled 100.0 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nadh dehydrogenase/nad(p)h nitroreductase;
PDBTitle: crystal structure of putative nadh dehydrogenase/nad(p)h2 nitroreductase (bdi_1728) from parabacteroides distasonis atcc 85033 at 1.86 a resolution
33d1noxa_
not modelled 100.0 23
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
34c3e39A_
not modelled 100.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (dde_0787) from desulfovibrio desulfuricans subsp. at 1.70 a3 resolution
35c3gagB_
not modelled 100.0 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nadh dehydrogenase, nadph nitroreductase;
PDBTitle: crystal structure of a nitroreductase-like protein (smu.346) from2 streptococcus mutans at 1.70 a resolution
36c3e10B_
not modelled 100.0 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nadh oxidase;
PDBTitle: crystal structure of putative nadh oxidase (np_348178.1) from2 clostridium acetobutylicum at 1.40 a resolution
37c3ge5A_
not modelled 100.0 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h:fmn oxidoreductase;
PDBTitle: crystal structure of a putative nad(p)h:fmn oxidoreductase (pg0310)2 from porphyromonas gingivalis w83 at 1.70 a resolution
38c3g14B_
not modelled 100.0 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of nitroreductase family protein (yp_877874.1) from2 clostridium novyi nt at 1.75 a resolution
39c3pxvD_
not modelled 100.0 18
PDB header:oxidoreductase
Chain: D: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a nitroreductase with bound fmn (dhaf_2018) from2 desulfitobacterium hafniense dcb-2 at 2.30 a resolution
40d2b67a1
not modelled 100.0 18
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
41c2wqfA_
not modelled 100.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:copper induced nitroreductase d;
PDBTitle: crystal structure of the nitroreductase cind from2 lactococcus lactis in complex with fmn
42c3gfaB_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (cd3205) from clostridium difficile 630 at 1.35 a resolution
43c2i7hE_
not modelled 100.0 24
PDB header:oxidoreductase
Chain: E: PDB Molecule:nitroreductase-like family protein;
PDBTitle: crystal structure of the nitroreductase-like family protein from2 bacillus cereus
44c3to0A_
not modelled 100.0 30
PDB header:oxidoreductase
Chain: A: PDB Molecule:iodotyrosine deiodinase 1;
PDBTitle: crystal structure of mus musculus iodotyrosine deiodinase (iyd) c217a,2 c239a bound to fmn
45c5j6cA_
not modelled 100.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative reductase;
PDBTitle: fmn-dependent nitroreductase (cdr20291_0767) from clostridium2 difficile r20291
46c3koqC_
not modelled 100.0 21
PDB header:oxidoreductase
Chain: C: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of a nitroreductase family protein (cd3355) from2 clostridium difficile 630 at 1.58 a resolution
47c2h0uA_
not modelled 100.0 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph-flavin oxidoreductase;
PDBTitle: crystal structure of nad(p)h-flavin oxidoreductase from helicobacter2 pylori
48c3ek3A_
not modelled 100.0 21
PDB header:flavoprotein
Chain: A: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of nitroreductase with bound fmn (yp_211706.1) from2 bacteroides fragilis nctc 9343 at 1.70 a resolution
49c2r01A_
not modelled 100.0 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of a putative fmn-dependent nitroreductase (ct0345)2 from chlorobium tepidum tls at 1.15 a resolution
50c3qdlD_
not modelled 100.0 25
PDB header:oxidoreductase
Chain: D: PDB Molecule:oxygen-insensitive nadph nitroreductase;
PDBTitle: crystal structure of rdxa from helicobacter pyroli
51c5j62B_
not modelled 100.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative reductase;
PDBTitle: fmn-dependent nitroreductase (cdr20291_0684) from clostridium2 difficile r20291
52c4urpB_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:fatty acid repression mutant protein 2;
PDBTitle: the crystal structure of nitroreductase from saccharomyces2 cerevisiae
53c3hoiA_
not modelled 100.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:fmn-dependent nitroreductase bf3017;
PDBTitle: crystal structure of fmn-dependent nitroreductase bf3017 from2 bacteroides fragilis nctc 9343 (yp_212631.1) from bacteroides3 fragilis nctc 9343 at 1.55 a resolution
54c3hj9A_
not modelled 100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase;
PDBTitle: crystal structure of a putative nitroreductase (reut_a1228) from2 ralstonia eutropha jmp134 at 2.00 a resolution
55c3bm2B_
not modelled 100.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:protein ydja;
PDBTitle: crystal structure of a minimal nitroreductase ydja from escherichia2 coli k12 with and without fmn cofactor
56c5lq4B_
not modelled 100.0 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:cyagox;
PDBTitle: the structure of thcox, the first oxidase protein from the cyanobactin2 pathways
57c3eo7A_
not modelled 99.9 14
PDB header:flavoprotein
Chain: A: PDB Molecule:putative nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase (ava_2154) from2 anabaena variabilis atcc 29413 at 1.80 a resolution
58d1vkwa_
not modelled 99.9 21
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:Putative nitroreductase TM1586
59c2ymvA_
not modelled 99.8 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:acg nitroreductase;
PDBTitle: structure of reduced m smegmatis 5246, a homologue of m.2 tuberculosis acg
60c6gosC_
not modelled 99.7 12
PDB header:antibiotic/inhibitor
Chain: C: PDB Molecule:microcin b17-processing protein mcbc;
PDBTitle: e. coli microcin synthetase mcbbcd complex with pro-mccb17 bound
61d1oeyj_
not modelled 37.8 10
Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:PB1 domain
62c3zeyI_
not modelled 36.2 17
PDB header:ribosome
Chain: I: PDB Molecule:40s ribosomal protein s15, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
63c4v1am_
not modelled 27.9 19
PDB header:ribosome
Chain: M: PDB Molecule:
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 22 of 2
64d2oc6a1
not modelled 27.5 16
Fold:Secretion chaperone-like
Superfamily:YdhG-like
Family:YdhG-like
65d2ic1a1
not modelled 25.9 10
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Cysteine dioxygenase type I
66c5abxB_
not modelled 22.2 35
PDB header:translation
Chain: B: PDB Molecule:4e-binding protein mextli;
PDBTitle: complex of c. elegans eif4e-3 with the 4e-binding protein2 mextli and cap analog
67c3j38P_
not modelled 20.2 17
PDB header:ribosome
Chain: P: PDB Molecule:40s ribosomal protein s15, isoform a;
PDBTitle: structure of the d. melanogaster 40s ribosomal proteins
68d2i8da1
not modelled 20.0 12
Fold:Secretion chaperone-like
Superfamily:YdhG-like
Family:YdhG-like
69c2p1nD_
not modelled 19.8 11
PDB header:signaling protein
Chain: D: PDB Molecule:skp1-like protein 1a;
PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase
70d1fs2b1
not modelled 19.5 11
Fold:Skp1 dimerisation domain-like
Superfamily:Skp1 dimerisation domain-like
Family:Skp1 dimerisation domain-like
71c5xxuP_
not modelled 18.4 14
PDB header:ribosome
Chain: P: PDB Molecule:ribosomal protein us19;
PDBTitle: small subunit of toxoplasma gondii ribosome
72d2ovra1
not modelled 18.3 11
Fold:Skp1 dimerisation domain-like
Superfamily:Skp1 dimerisation domain-like
Family:Skp1 dimerisation domain-like
73c2ds2B_
not modelled 18.1 18
PDB header:plant protein
Chain: B: PDB Molecule:sweet protein mabinlin-2 chain b;
PDBTitle: crystal structure of mabinlin ii
74c2kl4A_
not modelled 18.0 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:bh2032 protein;
PDBTitle: nmr structure of the protein nb7804a
75c2ovqA_
not modelled 17.8 11
PDB header:transcription/cell cycle
Chain: A: PDB Molecule:s-phase kinase-associated protein 1a;
PDBTitle: structure of the skp1-fbw7-cyclinedegc complex
76c3gyxJ_
not modelled 17.8 19
PDB header:oxidoreductase
Chain: J: PDB Molecule:adenylylsulfate reductase;
PDBTitle: crystal structure of adenylylsulfate reductase from2 desulfovibrio gigas
77c1nexC_
not modelled 17.0 11
PDB header:ligase, cell cycle
Chain: C: PDB Molecule:centromere dna-binding protein complex cbf3
PDBTitle: crystal structure of scskp1-sccdc4-cpd peptide complex
78d2auwa1
not modelled 16.2 29
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:NE0471 C-terminal domain-like
79c5domA_
not modelled 14.7 18
PDB header:plant protein
Chain: A: PDB Molecule:2s albumin;
PDBTitle: crystal structure, maturation and flocculating properties of a 2s2 albumin from moringa oleifera seeds
80c5t0fB_
not modelled 13.1 17
PDB header:transcription
Chain: B: PDB Molecule:protein tify 9;
PDBTitle: crystal structure of the myc3 n-terminal domain [44-242] in complex2 with jaz10 cmid domain [16-58] from arabidopsis
81c3o30I_
not modelled 12.3 17
PDB header:ribosome
Chain: I: PDB Molecule:40s ribosomal protein s15;
PDBTitle: yeast 80s ribosome. this entry consists of the 40s subunit of the2 second 80s in the asymmetric unit.
82c5u87A_
not modelled 12.2 18
PDB header:plant protein
Chain: A: PDB Molecule:preproalbumin paws1;
PDBTitle: nmr structure of the precursor protein paws1 comprising sfti-1 and a2 seed storage albumin
83d3elna1
not modelled 11.1 10
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:Cysteine dioxygenase type I
84c2fhoA_
not modelled 11.1 14
PDB header:rna binding protein
Chain: A: PDB Molecule:spliceosomal protein sf3b155;
PDBTitle: nmr solution structure of the human spliceosomal protein2 complex p14-sf3b155
85d1nexa1
not modelled 10.8 14
Fold:Skp1 dimerisation domain-like
Superfamily:Skp1 dimerisation domain-like
Family:Skp1 dimerisation domain-like
86c4n0hF_
not modelled 10.3 22
PDB header:ligase
Chain: F: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit f,
PDBTitle: crystal structure of s. cerevisiae mitochondrial gatfab
87c3nr7A_
not modelled 10.2 24
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding protein h-ns;
PDBTitle: crystal structure of s. typhimurium h-ns 1-83
88d1gefa_
not modelled 9.8 16
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Hjc-like
89d2olra2
not modelled 9.0 25
Fold:PEP carboxykinase N-terminal domain
Superfamily:PEP carboxykinase N-terminal domain
Family:PEP carboxykinase N-terminal domain
90c1pnbB_
not modelled 8.6 14
PDB header:seed storage protein
Chain: B: PDB Molecule:napin bnib;
PDBTitle: structure of napin bnib, nmr, 10 structures
91c2lvfA_
not modelled 8.6 19
PDB header:allergen
Chain: A: PDB Molecule:2s albumin;
PDBTitle: solution structure of the brazil nut 2s albumin ber e 1
92c4iumA_
not modelled 8.2 37
PDB header:hydrolase/protein binding
Chain: A: PDB Molecule:papain-like protease 2;
PDBTitle: equine arteritis virus papain-like protease 2 (plp2) covalently bound2 to ubiquitin
93c1sm7A_
not modelled 8.1 15
PDB header:plant protein
Chain: A: PDB Molecule:recombinant ib pronapin;
PDBTitle: solution structure of the recombinant pronapin precursor, bnib.
94c5xyiP_
not modelled 8.0 10
PDB header:ribosome
Chain: P: PDB Molecule:ribosomal protein s19, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
95c3fajA_
not modelled 7.8 14
PDB header:structural protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of the structural protein p131 of the archaeal virus2 acidianus two-tailed virus (atv)
96c4gxtA_
not modelled 6.8 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:a conserved functionally unknown protein;
PDBTitle: the crystal structure of a conserved functionally unknown protein from2 anaerococcus prevotii dsm 20548
97c2x49A_
not modelled 6.6 9
PDB header:protein transport
Chain: A: PDB Molecule:invasion protein inva;
PDBTitle: crystal structure of the c-terminal domain of inva
98c6chgE_
not modelled 6.1 22
PDB header:transferase
Chain: E: PDB Molecule:klla0e03521p;
PDBTitle: crystal structure of the yeast compass catalytic module
99c2f5uA_
not modelled 6.1 12
PDB header:viral protein
Chain: A: PDB Molecule:virion protein ul25;
PDBTitle: structural characterization of the ul25 dna packaging2 protein from herpes simplex virus type 1

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