Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3382c_(lytB1)_3796628_3797617
DateFri Aug 9 18:20:05 BST 2019
Unique Job IDb603b7c3ef536ed7
SequenceMAEVFVGPVA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:61.799 Y:57.284 Z:38.794
Model (left) based on template c3urkA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
PDBTitle: isph in complex with propynyl diphosphate (1061)
Confidence and coverage
Confidence:100.0% Coverage: 93%
306 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3urkA_
100.0 52
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
PDBTitle: isph in complex with propynyl diphosphate (1061)
2c3ke8A_
100.0 52
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
PDBTitle: crystal structure of isph:hmbpp-complex
3c4n7bA_
100.0 40
PDB header:oxidoreductase
Chain: A: PDB Molecule:lytb;
PDBTitle: structure of the e-1-hydroxy-2-methyl-but-2-enyl-4-diphosphate2 reductase from plasmodium falciparum
4c3dnfB_
100.0 30
PDB header:oxidoreductase
Chain: B: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
PDBTitle: structure of (e)-4-hydroxy-3-methyl-but-2-enyl diphosphate reductase,2 the terminal enzyme of the non-mevalonate pathway
5c4zhtB_
90.7 14
PDB header:isomerase
Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n-
PDBTitle: crystal structure of udp-glcnac 2-epimerase
6d1m2ka_
88.4 15
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
7d1ma3a_
88.2 15
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
8c3ff4A_
86.8 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein chu_1412
9c5c4nD_
86.1 25
PDB header:oxidoreductase
Chain: D: PDB Molecule:precorrin-6a reductase;
PDBTitle: cobk precorrin-6a reductase
10d2j13a1
84.4 16
Fold:7-stranded beta/alpha barrel
Superfamily:Glycoside hydrolase/deacetylase
Family:NodB-like polysaccharide deacetylase
11c4zo9B_
80.9 21
PDB header:hydrolase
Chain: B: PDB Molecule:lin1840 protein;
PDBTitle: crystal structure of mutant (d270a) beta-glucosidase from listeria2 innocua in complex with laminaribiose
12d1e0ta2
79.1 13
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Pyruvate kinase
13c3pkiF_
78.3 14
PDB header:hydrolase
Chain: F: PDB Molecule:nad-dependent deacetylase sirtuin-6;
PDBTitle: human sirt6 crystal structure in complex with adp ribose
14c3h5lB_
77.1 14
PDB header:transport protein
Chain: B: PDB Molecule:putative branched-chain amino acid abc transporter;
PDBTitle: crystal structure of a putative branched-chain amino acid abc2 transporter from silicibacter pomeroyi
15c3zg6A_
74.8 14
PDB header:hydrolase/inhibitor
Chain: A: PDB Molecule:nad-dependent protein deacetylase sirtuin-6;
PDBTitle: the novel de-long chain fatty acid function of human sirt6
16c3l4eA_
74.7 21
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized peptidase lmo0363;
PDBTitle: 1.5a crystal structure of a putative peptidase e protein from listeria2 monocytogenes egd-e
17d2d59a1
73.8 31
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:CoA-binding domain
18d2dlxa1
73.6 12
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:UAS domain
19c3hutA_
73.4 19
PDB header:transport protein
Chain: A: PDB Molecule:putative branched-chain amino acid abc
PDBTitle: crystal structure of a putative branched-chain amino acid2 abc transporter from rhodospirillum rubrum
20d1yc5a1
73.3 19
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
21c3j09A_
not modelled 72.4 17
PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa
22d2hk6a1
not modelled 72.2 16
Fold:Chelatase-like
Superfamily:Chelatase
Family:Ferrochelatase
23c4e38A_
not modelled 71.7 18
PDB header:lyase
Chain: A: PDB Molecule:keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate
PDBTitle: crystal structure of probable keto-hydroxyglutarate-aldolase from2 vibrionales bacterium swat-3 (target efi-502156)
24d1s5pa_
not modelled 70.7 14
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
25d1fyea_
not modelled 70.5 16
Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Aspartyl dipeptidase PepE
26d1xmta_
not modelled 69.7 16
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:N-acetyl transferase, NAT
27c3afoB_
not modelled 69.1 12
PDB header:transferase
Chain: B: PDB Molecule:nadh kinase pos5;
PDBTitle: crystal structure of yeast nadh kinase complexed with nadh
28d1oj7a_
not modelled 68.9 11
Fold:Dehydroquinate synthase-like
Superfamily:Dehydroquinate synthase-like
Family:Iron-containing alcohol dehydrogenase
29c5ereA_
not modelled 67.8 19
PDB header:signaling protein
Chain: A: PDB Molecule:extracellular ligand-binding receptor;
PDBTitle: extracellular ligand binding receptor from desulfohalobium retbaense2 dsm5692
30c4evsA_
not modelled 67.6 11
PDB header:transport protein
Chain: A: PDB Molecule:putative abc transporter subunit, substrate-binding
PDBTitle: crystal structure of abc transporter from r. palustris - solute2 binding protein (rpa0985) in complex with 4-hydroxybenzoate
31d1oboa_
not modelled 67.3 7
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
32c2iz6A_
not modelled 67.1 17
PDB header:metal transport
Chain: A: PDB Molecule:molybdenum cofactor carrier protein;
PDBTitle: structure of the chlamydomonas rheinhardtii moco carrier2 protein
33c6qkzA_
not modelled 66.8 14
PDB header:membrane protein
Chain: A: PDB Molecule:glua1;
PDBTitle: full length glua1/2-gamma8 complex
34d1j6ua2
not modelled 65.9 14
Fold:MurD-like peptide ligases, peptide-binding domain
Superfamily:MurD-like peptide ligases, peptide-binding domain
Family:MurCDEF C-terminal domain
35c6oviA_
not modelled 64.9 13
PDB header:lyase
Chain: A: PDB Molecule:keto-deoxy-phosphogluconate aldolase;
PDBTitle: crystal structure of kdpg aldolase from legionella pneumophila with2 pyruvate captured at low ph as a covalent carbinolamine intermediate
36d1qo0a_
not modelled 64.7 11
Fold:Periplasmic binding protein-like I
Superfamily:Periplasmic binding protein-like I
Family:L-arabinose binding protein-like
37c3p9zA_
not modelled 64.6 16
PDB header:ligase
Chain: A: PDB Molecule:uroporphyrinogen iii cosynthase (hemd);
PDBTitle: crystal structure of uroporphyrinogen-iii synthetase from helicobacter2 pylori 26695
38c4maaA_
not modelled 63.7 17
PDB header:transport protein
Chain: A: PDB Molecule:putative branched-chain amino acid abc transporter,
PDBTitle: the crystal structure of amino acid abc transporter substrate-binding2 protein from pseudomonas fluorescens pf-5
39c3k35D_
not modelled 63.4 13
PDB header:hydrolase
Chain: D: PDB Molecule:nad-dependent deacetylase sirtuin-6;
PDBTitle: crystal structure of human sirt6
40c3h75A_
not modelled 63.4 15
PDB header:sugar binding protein
Chain: A: PDB Molecule:periplasmic sugar-binding domain protein;
PDBTitle: crystal structure of a periplasmic sugar-binding protein from the2 pseudomonas fluorescens
41c5i0cA_
not modelled 62.8 12
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein yjdj;
PDBTitle: crystal structure of predicted acyltransferase yjdj with acyl-coa n-2 acyltransferase domain from escherichia coli str. k-12
42c2olsA_
not modelled 62.7 14
PDB header:transferase
Chain: A: PDB Molecule:phosphoenolpyruvate synthase;
PDBTitle: the crystal structure of the phosphoenolpyruvate synthase from2 neisseria meningitidis
43c6a4tB_
not modelled 62.5 22
PDB header:hydrolase
Chain: B: PDB Molecule:peptidase e;
PDBTitle: crystal structure of peptidase e from deinococcus radiodurans r1
44c3zdrA_
not modelled 60.9 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:alcohol dehydrogenase domain of the bifunctional
PDBTitle: structure of the alcohol dehydrogenase (adh) domain of a2 bifunctional adhe dehydrogenase from geobacillus3 thermoglucosidasius ncimb 11955
45c3j08A_
not modelled 60.8 17
PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa
46d1ag9a_
not modelled 60.4 7
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:Flavodoxin-related
47c1kblA_
not modelled 59.7 13
PDB header:transferase
Chain: A: PDB Molecule:pyruvate phosphate dikinase;
PDBTitle: pyruvate phosphate dikinase
48d1w5fa1
not modelled 59.5 15
Fold:Tubulin nucleotide-binding domain-like
Superfamily:Tubulin nucleotide-binding domain-like
Family:Tubulin, GTPase domain
49d1pkla2
not modelled 58.4 14
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Pyruvate kinase
50c2bg5C_
not modelled 57.9 10
PDB header:transferase
Chain: C: PDB Molecule:phosphoenolpyruvate-protein kinase;
PDBTitle: crystal structure of the phosphoenolpyruvate-binding enzyme i-domain2 from the thermoanaerobacter tengcongensis pep: sugar3 phosphotransferase system (pts)
51c5nymA_
not modelled 57.8 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin-like protein 2.1;
PDBTitle: crystal structure of the atypical poplar thioredoxin-like2.1 in2 reduced state
52c3mmzA_
not modelled 57.2 16
PDB header:hydrolase
Chain: A: PDB Molecule:putative had family hydrolase;
PDBTitle: crystal structure of putative had family hydrolase from streptomyces2 avermitilis ma-4680
53c5wabD_
not modelled 57.0 17
PDB header:hydrolase
Chain: D: PDB Molecule:putative beta-glucosidase;
PDBTitle: crystal structure of bifidobacterium adolescentis gh3 beta-glucosidase
54d1lbqa_
not modelled 56.9 19
Fold:Chelatase-like
Superfamily:Chelatase
Family:Ferrochelatase
55c5hvnA_
not modelled 56.7 16
PDB header:lyase
Chain: A: PDB Molecule:3-dehydroquinate synthase;
PDBTitle: 3.0 angstrom crystal structure of 3-dehydroquinate synthase (arob)2 from francisella tularensis in complex with nad.
56d1ofua1
not modelled 56.2 15
Fold:Tubulin nucleotide-binding domain-like
Superfamily:Tubulin nucleotide-binding domain-like
Family:Tubulin, GTPase domain
57c3snrA_
not modelled 55.7 16
PDB header:transport protein
Chain: A: PDB Molecule:extracellular ligand-binding receptor;
PDBTitle: rpd_1889 protein, an extracellular ligand-binding receptor from2 rhodopseudomonas palustris.
58c3d22A_
not modelled 55.5 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin h-type;
PDBTitle: crystal structure of a poplar thioredoxin h mutant, pttrxh4c61s
59c2h9aA_
not modelled 55.1 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:carbon monoxide dehydrogenase corrinoid/iron-sulfur
PDBTitle: corrinoid iron-sulfur protein
60c3h6hB_
not modelled 54.1 16
PDB header:membrane protein
Chain: B: PDB Molecule:glutamate receptor, ionotropic kainate 2;
PDBTitle: crystal structure of the glur6 amino terminal domain dimer assembly2 mpd form
61c1jzdA_
not modelled 53.1 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc;
PDBTitle: dsbc-dsbdalpha complex
62c3i09A_
not modelled 52.8 11
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic branched-chain amino acid-binding protein;
PDBTitle: crystal structure of a periplasmic binding protein (bma2936) from2 burkholderia mallei at 1.80 a resolution
63d1rlga_
not modelled 51.9 11
Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
64d1j6ua1
not modelled 51.3 14
Fold:MurCD N-terminal domain
Superfamily:MurCD N-terminal domain
Family:MurCD N-terminal domain
65d1r57a_
not modelled 50.9 27
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:N-acetyl transferase, NAT
66c3rfuC_
not modelled 50.8 20
PDB header:hydrolase, membrane protein
Chain: C: PDB Molecule:copper efflux atpase;
PDBTitle: crystal structure of a copper-transporting pib-type atpase
67c2mtbA_
not modelled 50.2 9
PDB header:electron transport
Chain: A: PDB Molecule:flavodoxin-2;
PDBTitle: solution structure of apo_fldb
68c3s40C_
not modelled 48.9 20
PDB header:transferase
Chain: C: PDB Molecule:diacylglycerol kinase;
PDBTitle: the crystal structure of a diacylglycerol kinases from bacillus2 anthracis str. sterne
69c4n03A_
not modelled 48.8 2
PDB header:transport protein
Chain: A: PDB Molecule:abc-type branched-chain amino acid transport systems
PDBTitle: fatty acid abc transporter substrate-binding protein from2 thermomonospora curvata
70c4kv7A_
not modelled 48.5 19
PDB header:unknown function
Chain: A: PDB Molecule:probable leucine/isoleucine/valine-binding protein;
PDBTitle: the crystal structure of a possible leucine/isoleucine/valine-binding2 protein from rhodopirellula baltica sh 1
71d1qwka_
not modelled 48.2 10
Fold:TIM beta/alpha-barrel
Superfamily:NAD(P)-linked oxidoreductase
Family:Aldo-keto reductases (NADP)
72c5x2oD_
not modelled 47.9 23
PDB header:signaling protein/immune system
Chain: D: PDB Molecule:taste receptor, type 1, member 3;
PDBTitle: crystal structure of the medaka fish taste receptor t1r2a-t1r3 ligand2 binding domains in complex with l-arginine
73c1t3bA_
not modelled 47.8 23
PDB header:isomerase
Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc;
PDBTitle: x-ray structure of dsbc from haemophilus influenzae
74d1s1pa_
not modelled 47.8 13
Fold:TIM beta/alpha-barrel
Superfamily:NAD(P)-linked oxidoreductase
Family:Aldo-keto reductases (NADP)
75d1vqof1
not modelled 46.9 21
Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins
76c3pfnB_
not modelled 46.9 8
PDB header:transferase
Chain: B: PDB Molecule:nad kinase;
PDBTitle: crystal structure of human nad kinase
77c4rxuA_
not modelled 46.4 9
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic sugar-binding protein;
PDBTitle: crystal structure of carbohydrate transporter solute binding protein2 caur_1924 from chloroflexus aurantiacus, target efi-511158, in3 complex with d-glucose
78c6q7jB_
not modelled 46.4 12
PDB header:hydrolase
Chain: B: PDB Molecule:exo-1,4-beta-xylosidase xlnd;
PDBTitle: gh3 exo-beta-xylosidase (xlnd) in complex with xylobiose aziridine2 activity based probe
79c3sg0A_
not modelled 46.4 16
PDB header:signaling protein
Chain: A: PDB Molecule:extracellular ligand-binding receptor;
PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2
80c4f11A_
not modelled 46.4 13
PDB header:signaling protein
Chain: A: PDB Molecule:gamma-aminobutyric acid type b receptor subunit 2;
PDBTitle: crystal structure of the extracellular domain of human gaba(b)2 receptor gbr2
81c2wjxA_
not modelled 45.8 9
PDB header:transport protein
Chain: A: PDB Molecule:glutamate receptor 2;
PDBTitle: crystal structure of the human ionotropic glutamate2 receptor glur2 atd region at 4.1 a resolution
82d1kbla1
not modelled 45.3 13
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Pyruvate phosphate dikinase, C-terminal domain
83c3k2qA_
not modelled 45.1 14
PDB header:transferase
Chain: A: PDB Molecule:pyrophosphate-dependent phosphofructokinase;
PDBTitle: crystal structure of pyrophosphate-dependent2 phosphofructokinase from marinobacter aquaeolei, northeast3 structural genomics consortium target mqr88
84c4npbA_
not modelled 45.1 30
PDB header:isomerase
Chain: A: PDB Molecule:protein disulfide isomerase ii;
PDBTitle: the crystal structure of thiol:disulfide interchange protein dsbc from2 yersinia pestis co92
85c5kuhB_
not modelled 44.7 16
PDB header:signaling protein
Chain: B: PDB Molecule:glutamate receptor ionotropic, kainate 2;
PDBTitle: gluk2em with ly466195
86c5ketA_
not modelled 44.3 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldo-keto reductase 1;
PDBTitle: structure of the aldo-keto reductase from coptotermes gestroi
87c5z6vA_
not modelled 44.3 9
PDB header:protein transport
Chain: A: PDB Molecule:abc-type uncharacterized transport system periplasmic
PDBTitle: crystal structure of a substrate-binding protein from rhodothermus2 marinus
88d1iuka_
not modelled 44.2 21
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:CoA-binding domain
89c4zdiE_
not modelled 44.2 15
PDB header:ligase
Chain: E: PDB Molecule:ctp synthase;
PDBTitle: crystal structure of the m. tuberculosis ctp synthase pyrg (apo form)
90c4uzzB_
not modelled 44.1 19
PDB header:motor protein
Chain: B: PDB Molecule:intraflagellar transporter-like protein;
PDBTitle: crystal structure of the ttift52-46 complex
91c4n0qD_
not modelled 43.8 9
PDB header:transport protein
Chain: D: PDB Molecule:leu/ile/val-binding protein homolog 3;
PDBTitle: crystal structure of an abc transporter, substrate-binding protein2 from brucella melitensis 16m in complex with l-leucine using a3 crystal grown in a crystal former (microlytic)
92c6c2uA_
not modelled 43.3 13
PDB header:de novo protein
Chain: A: PDB Molecule:phosphate-loop protein;
PDBTitle: solution structure of a phosphate-loop protein
93c4ru0B_
not modelled 43.1 18
PDB header:transport protein
Chain: B: PDB Molecule:putative branched-chain amino acid abc transporter,
PDBTitle: the crystal structure of abc transporter permease from pseudomonas2 fluorescens group
94c3n0xA_
not modelled 43.0 13
PDB header:transport protein
Chain: A: PDB Molecule:possible substrate binding protein of abc transporter
PDBTitle: crystal structure of an abc-type branched-chain amino acid transporter2 (rpa4397) from rhodopseudomonas palustris cga009 at 1.50 a resolution
95c2vlvA_
not modelled 41.9 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin h isoform 2.;
PDBTitle: crystal structure of barley thioredoxin h isoform 2 in partially2 radiation-reduced state
96c3td9A_
not modelled 41.9 16
PDB header:transport protein
Chain: A: PDB Molecule:branched chain amino acid abc transporter, periplasmic
PDBTitle: crystal structure of a leucine binding protein livk (tm1135) from2 thermotoga maritima msb8 at 1.90 a resolution
97c2vpiA_
not modelled 41.8 7
PDB header:ligase
Chain: A: PDB Molecule:gmp synthase;
PDBTitle: human gmp synthetase - glutaminase domain
98c1j6uA_
not modelled 41.7 13
PDB header:ligase
Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc;
PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase murc (tm0231)2 from thermotoga maritima at 2.3 a resolution
99c3qbeA_
not modelled 41.6 9
PDB header:lyase
Chain: A: PDB Molecule:3-dehydroquinate synthase;
PDBTitle: crystal structure of the 3-dehydroquinate synthase (arob) from2 mycobacterium tuberculosis
100c4mlcA_
not modelled 41.2 15
PDB header:signaling protein
Chain: A: PDB Molecule:extracellular ligand-binding receptor;
PDBTitle: abc transporter substrate-binding protein fromdesulfitobacterium2 hafniense
101c3ej6D_
not modelled 41.1 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:catalase-3;
PDBTitle: neurospora crassa catalase-3 crystal structure
102c6g61A_
not modelled 41.0 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin o1, mitochondrial;
PDBTitle: crystal structure of thioredoxin o1 from arabidopsis thaliana in2 oxidized state
103c4j8pA_
not modelled 40.9 20
PDB header:flavoprotein
Chain: A: PDB Molecule:flavodoxin;
PDBTitle: crystal structure of a putative flavoprotein (bacuni_04544) from2 bacteroides uniformis atcc 8492 at 1.50 a resolution
104d1t3ba1
not modelled 40.8 23
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:DsbC/DsbG C-terminal domain-like
105d1j96a_
not modelled 40.7 21
Fold:TIM beta/alpha-barrel
Superfamily:NAD(P)-linked oxidoreductase
Family:Aldo-keto reductases (NADP)
106c3p3wC_
not modelled 40.5 15
PDB header:transport protein
Chain: C: PDB Molecule:glutamate receptor 3;
PDBTitle: structure of a dimeric glua3 n-terminal domain (ntd) at 4.2 a2 resolution
107c3eafA_
not modelled 40.5 11
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter, substrate binding protein;
PDBTitle: crystal structure of abc transporter, substrate binding protein2 aeropyrum pernix
108c4ys6A_
not modelled 40.4 14
PDB header:solute-binding protein
Chain: A: PDB Molecule:putative solute-binding component of abc transporter;
PDBTitle: crystal structure of an abc transporter solute binding protein2 (ipr025997) from clostridium phytofermentans (cphy_1585, target efi-3 511156) with bound beta-d-glucose
109c3sm9A_
not modelled 40.0 21
PDB header:signaling protein
Chain: A: PDB Molecule:metabotropic glutamate receptor 3;
PDBTitle: crystal structure of metabotropic glutamate receptor 3 precursor in2 presence of ly341495 antagonist
110c3trjC_
not modelled 39.9 16
PDB header:isomerase
Chain: C: PDB Molecule:phosphoheptose isomerase;
PDBTitle: structure of a phosphoheptose isomerase from francisella tularensis
111d1xwaa_
not modelled 39.9 11
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Thioltransferase
112c5zy9D_
not modelled 39.8 18
PDB header:ligase
Chain: D: PDB Molecule:threonyl-trna synthase;
PDBTitle: structural basis for a trna synthetase
113c4wwhA_
not modelled 39.8 13
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter;
PDBTitle: crystal structure of an abc transporter solute binding protein2 (ipr025997) from mycobacterium smegmatis (msmeg_1704, target efi-3 510967) with bound d-galactose
114d1vbga1
not modelled 39.5 17
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Pyruvate phosphate dikinase, C-terminal domain
115d1jhfa1
not modelled 39.0 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LexA repressor, N-terminal DNA-binding domain
116d1a3xa2
not modelled 38.4 16
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Pyruvate kinase
117c3h7uA_
not modelled 38.2 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldo-keto reductase;
PDBTitle: crystal structure of the plant stress-response enzyme akr4c9
118c5u03C_
not modelled 38.1 17
PDB header:ligase, protein fibril
Chain: C: PDB Molecule:ctp synthase 1;
PDBTitle: cryo-em structure of the human ctp synthase filament
119c4l1gB_
not modelled 38.1 18
PDB header:hydrolase
Chain: B: PDB Molecule:peptidoglycan n-acetylglucosamine deacetylase;
PDBTitle: crystal structure of the bc1960 peptidoglycan n-acetylglucosamine2 deacetylase from bacillus cereus
120d2ozba1
not modelled 37.7 10
Fold:Bacillus chorismate mutase-like
Superfamily:L30e-like
Family:L30e/L7ae ribosomal proteins

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite