Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3384c_(-)_3799423_3799815
DateFri Aug 9 18:20:05 BST 2019
Unique Job ID6e6f3f988b722ad2
SequenceMAAIYLDSSA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.683 Y:33.376 Z:48.856
Model (left) based on template c2fe1A_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein pae0151;
PDBTitle: crystal structure of pae0151 from pyrobaculum aerophilum
Confidence and coverage
Confidence: 99.7% Coverage: 90%
117 residues ( 90% of your sequence) have been modelled with 99.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2fe1A_



99.7 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein pae0151;
PDBTitle: crystal structure of pae0151 from pyrobaculum aerophilum
2d2fe1a1



99.7 25
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
3d1v8pa_



99.7 21
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
4c1v8pK_



99.7 21
PDB header:structural genomics, unknown function
Chain: K: PDB Molecule:hypothetical protein pae2754;
PDBTitle: crystal structure of pae2754 from pyrobaculum aerophilum
5c4xgrG_



99.6 19
PDB header:toxin/antitoxin
Chain: G: PDB Molecule:ribonuclease vapc30;
PDBTitle: crystal structure of addiction module from mycobacterial species
6c5wzfB_



99.6 19
PDB header:hydrolase
Chain: B: PDB Molecule:23s rrna-specific endonuclease vapc20;
PDBTitle: crystal structure of mycobacterium tuberculosis vapc20 (rv2549c),2 sarcin-ricin loop cleaving toxin
7d1y82a1



99.5 13
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
8c6a7vG_



99.5 16
PDB header:toxin/antitoxin
Chain: G: PDB Molecule:ribonuclease vapc11;
PDBTitle: crystal structure of mycobacterium tuberculosis vapbc11 toxin-2 antitoxin complex
9c3zvkC_



99.5 13
PDB header:antitoxin/toxin/dna
Chain: C: PDB Molecule:toxin of toxin-antitoxin system;
PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter
10c3h87B_



99.4 17
PDB header:toxin/antitoxin
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: rv0301 rv0300 toxin antitoxin complex from mycobacterium tuberculosis
11d2h1ca1



99.4 19
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
12c3tndC_



99.4 17
PDB header:translation, toxin
Chain: C: PDB Molecule:trna(fmet)-specific endonuclease vapc;
PDBTitle: crystal structure of shigella flexneri vapbc toxin-antitoxin complex
13c5sv2A_



99.4 17
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease vapc21;
PDBTitle: toxin vapc21 from mycobacterium tuberculosis
14c5l6mC_



99.3 19
PDB header:hydrolase
Chain: C: PDB Molecule:ribonuclease vapc;
PDBTitle: structure of caulobacter crescentus vapbc1 (vapb1deltac:vapc1 form)
15d1v96a1



99.3 16
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
16c6nklA_



99.3 16
PDB header:antitoxin
Chain: A: PDB Molecule:ribonuclease vapc;
PDBTitle: 2.2 a resolution structure of vapbc-1 from nontypeable haemophilus2 influenzae
17c4chgC_



99.3 16
PDB header:toxin/antitoxin
Chain: C: PDB Molecule:probable ribonuclease vapc15;
PDBTitle: crystal structure of vapbc15 complex from mycobacterium tuberculosis
18c5x3tD_



99.3 18
PDB header:antitoxin/toxin
Chain: D: PDB Molecule:ribonuclease vapc26;
PDBTitle: vapbc from mycobacterium tuberculosis
19c3dboB_



99.1 20
PDB header:toxin/antitoxin
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a member of the vapbc family of toxin-antitoxin2 systems, vapbc-5, from mycobacterium tuberculosis
20c3i8oA_



98.8 13
PDB header:rna binding protein
Chain: A: PDB Molecule:kh domain-containing protein mj1533;
PDBTitle: a domain of a functionally unknown protein from methanocaldococcus2 jannaschii dsm 2661.
21d1w8ia_



not modelled 98.6 18
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
22c3ix7A_



not modelled 98.6 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ttha0540;
PDBTitle: crystal structure of a domain of functionally unknown protein from2 thermus thermophilus hb8
23c5ywwA_



not modelled 98.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:nucleotide binding protein pinc;
PDBTitle: archael ruvb-like holiday junction helicase
24c5f4hF_



not modelled 98.5 20
PDB header:hydrolase
Chain: F: PDB Molecule:nucleotide binding protein pinc;
PDBTitle: archael ruvb-like holiday junction helicase
25d1o4wa_



not modelled 98.4 19
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
26c2lcqA_



not modelled 98.2 18
PDB header:metal binding protein
Chain: A: PDB Molecule:putative toxin vapc6;
PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii
27c2hwwC_



not modelled 97.7 17
PDB header:rna binding protein
Chain: C: PDB Molecule:telomerase-binding protein est1a;
PDBTitle: structure of pin domain of human smg6
28c5jpqd_



not modelled 97.3 12
PDB header:ribosome
Chain: D: PDB Molecule:wd40 domain proteins;
PDBTitle: cryo-em structure of the 90s pre-ribosome
29c5yz4A_



not modelled 97.2 14
PDB header:hydrolase
Chain: A: PDB Molecule:rrna-processing protein fcf1;
PDBTitle: structure of the pin domain endonuclease utp24
30c6g5iy_



not modelled 96.2 21
PDB header:ribosome
Chain: Y: PDB Molecule:40s ribosomal protein s24;
PDBTitle: cryo-em structure of a late human pre-40s ribosomal subunit - state r
31c4mj7B_



not modelled 94.7 12
PDB header:rna binding protein
Chain: B: PDB Molecule:rrna-processing protein utp23;
PDBTitle: crystal structure of the pin domain of saccharomyces cerevisiae utp23
32c2mdtA_



not modelled 93.7 27
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: a pilt n-terminus domain protein sso1118 from hyperthemophilic2 archaeon sulfolobus solfataricus p2
33c2hwyB_



not modelled 75.3 11
PDB header:rna binding protein
Chain: B: PDB Molecule:protein smg5;
PDBTitle: structure of pin domain of human smg5.
34d1tfra2



not modelled 47.2 10
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
35c2zkr9_



not modelled 45.9 24
PDB header:ribosomal protein/rna
Chain: 9: PDB Molecule:60s ribosomal protein l32;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
36d1vqoy1



not modelled 39.7 29
Fold:Barstar-like
Superfamily:Ribosomal protein L32e
Family:Ribosomal protein L32e
37c3cceY_



not modelled 39.7 29
PDB header:ribosome
Chain: Y: PDB Molecule:50s ribosomal protein l32e;
PDBTitle: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna2 mutation u2535a
38d1ulza2



not modelled 34.6 16
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
39d2j9ga2



not modelled 34.1 14
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
40c2ihnA_



not modelled 31.9 14
PDB header:hydrolase/dna
Chain: A: PDB Molecule:ribonuclease h;
PDBTitle: co-crystal of bacteriophage t4 rnase h with a fork dna2 substrate
41c3j21b_



not modelled 30.6 29
PDB header:ribosome
Chain: B: PDB Molecule:50s ribosomal protein l2p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
42c4a1cX_



not modelled 29.4 17
PDB header:ribosome
Chain: X: PDB Molecule:60s ribosomal protein l32;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4.
43c3j3be_



not modelled 28.0 22
PDB header:ribosome
Chain: E: PDB Molecule:60s ribosomal protein l6;
PDBTitle: structure of the human 60s ribosomal proteins
44c3zf7i_



not modelled 28.0 17
PDB header:ribosome
Chain: I: PDB Molecule:60s ribosomal protein l18;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
45d1xo1a2



not modelled 26.7 13
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
46d1cmwa2



not modelled 21.6 18
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:5' to 3' exonuclease catalytic domain
47d1y81a1



not modelled 21.3 10
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:CoA-binding domain
48c3v33A_



not modelled 20.1 17
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease zc3h12a;
PDBTitle: crystal structure of mcpip1 conserved domain with zinc-finger motif
49c2duwA_



not modelled 20.0 15
PDB header:ligand binding protein
Chain: A: PDB Molecule:putative coa-binding protein;
PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae
50d1iuka_



not modelled 19.3 25
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:CoA-binding domain
51c3v32B_



not modelled 17.2 20
PDB header:hydrolase
Chain: B: PDB Molecule:ribonuclease zc3h12a;
PDBTitle: crystal structure of mcpip1 n-terminal conserved domain
52c1s1i0_



not modelled 17.2 55
PDB header:ribosome
Chain: 0: PDB Molecule:60s ribosomal protein l32;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1i, contains 60s subunit. the 40s4 ribosomal subunit is in file 1s1h.
53c3iz5h_



not modelled 17.0 18
PDB header:ribosome
Chain: H: PDB Molecule:60s ribosomal protein l7a (l7ae);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
54c3ff4A_



not modelled 16.7 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein chu_1412
55c4g94B_



not modelled 16.6 24
PDB header:dna binding protein
Chain: B: PDB Molecule:orf067;
PDBTitle: g1 orf67 / staphyloccus aureus sigmaa domain 4 complex
56c1jqsB_



not modelled 13.7 27
PDB header:ribosome
Chain: B: PDB Molecule:elongation factor g;
PDBTitle: fitting of l11 protein and elongation factor g (domain g'2 and v) in the cryo-em map of e. coli 70s ribosome bound3 with ef-g and gmppcp, a nonhydrolysable gtp analog
57d1w96a2



not modelled 12.7 16
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
58c5wt2A_



not modelled 10.9 50
PDB header:transferase
Chain: A: PDB Molecule:cysteine desulfurase iscs;
PDBTitle: nifs from helicobacter pylori
59d1hi9a_



not modelled 9.4 23
Fold:Dipeptide transport protein
Superfamily:Dipeptide transport protein
Family:Dipeptide transport protein
60c5mq9A_



not modelled 9.4 22
PDB header:translation
Chain: A: PDB Molecule:uncharacterized protein yacp;
PDBTitle: crystal structure of rae1 (yacp) from bacillus subtilis (w164l mutant)
61c5usrC_



not modelled 8.4 30
PDB header:transferase
Chain: C: PDB Molecule:cysteine desulfurase, mitochondrial;
PDBTitle: crystal structure of human nfs1-isd11 in complex with e. coli acyl-2 carrier protein at 3.09 angstroms
62c2eqyA_



not modelled 7.9 18
PDB header:dna binding protein
Chain: A: PDB Molecule:jumonji, at rich interactive domain 1b;
PDBTitle: solution structure of the arid domain of jarid1b protein
63c6cluC_



not modelled 7.5 23
PDB header:antimicrobial protein
Chain: C: PDB Molecule:dihydropteroate synthase;
PDBTitle: staphylococcus aureus dihydropteroate synthase (sadhps) f17l e208k2 double mutant structure
64c4mwaA_



not modelled 7.5 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
PDBTitle: 1.85 angstrom crystal structure of gcpe protein from bacillus2 anthracis
65d2csua1



not modelled 7.1 24
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:CoA-binding domain
66d1uc8a1



not modelled 6.4 19
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:Lysine biosynthesis enzyme LysX, N-terminal domain
67c3va7A_



not modelled 6.4 14
PDB header:ligase
Chain: A: PDB Molecule:klla0e08119p;
PDBTitle: crystal structure of the kluyveromyces lactis urea carboxylase
68d1kzyc2



not modelled 6.2 15
Fold:BRCT domain
Superfamily:BRCT domain
Family:53BP1
69c6g2dC_



not modelled 6.1 18
PDB header:ligase
Chain: C: PDB Molecule:acetyl-coa carboxylase 1;
PDBTitle: citrate-induced acetyl-coa carboxylase (acc-cit) filament at 5.4 a2 resolution
70c2jrzA_



not modelled 5.7 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:histone demethylase jarid1c;
PDBTitle: solution structure of the bright/arid domain from the human2 jarid1c protein.
71c5k9nB_



not modelled 5.5 18
PDB header:transferase
Chain: B: PDB Molecule:polyamine n acetyltransferase;
PDBTitle: structural and mechanistic analysis of drosophila melanogaster2 polyamine n acetyltransferase, an enzyme that catalyzes the formation3 of n acetylagmatine
72c4hecB_



not modelled 5.5 25
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium tuberculosis
73c4hnvB_



not modelled 5.2 16
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase;
PDBTitle: crystal structure of r54e mutant of s. aureus pyruvate carboxylase

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