Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3404c_(-)_3824060_3824764
DateFri Aug 9 18:20:07 BST 2019
Unique Job IDa83b907ee8348d22
SequenceVTILILTDNV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.777 Y:60.193 Z:66.288
Model (left) based on template c4pzuF_
Top template information
PDB header:transferase
Chain: F: PDB Molecule:uncharacterized protein rv3404c/mt3512;
PDBTitle: crystal structure of a putative uncharacterize protein rv3404c and2 likely sugar n-formyltransferase from mycobacterium tuberculosis
Confidence and coverage
Confidence:100.0% Coverage:100%
234 residues (100% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4pzuF_



100.0 100
PDB header:transferase
Chain: F: PDB Molecule:uncharacterized protein rv3404c/mt3512;
PDBTitle: crystal structure of a putative uncharacterize protein rv3404c and2 likely sugar n-formyltransferase from mycobacterium tuberculosis
2c4yfvA_



100.0 38
PDB header:transferase
Chain: A: PDB Molecule:viof;
PDBTitle: x-ray structure of the 4-n-formyltransferase viof from providencia2 alcalifaciens o30
3c1z7eC_



100.0 21
PDB header:hydrolase
Chain: C: PDB Molecule:protein arna;
PDBTitle: crystal structure of full length arna
4c4nv1D_



100.0 38
PDB header:transferase
Chain: D: PDB Molecule:formyltransferase;
PDBTitle: crystal structure of a 4-n formyltransferase from francisella2 tularensis
5c6nbpA_



100.0 50
PDB header:transferase
Chain: A: PDB Molecule:n-formyltransferase;
PDBTitle: crystal structure of a sugar n-formyltransferase from the plant2 pathogen pantoea ananatis
6c3tqqA_



100.0 21
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: structure of the methionyl-trna formyltransferase (fmt) from coxiella2 burnetii
7c1fmtA_



100.0 22
PDB header:formyltransferase
Chain: A: PDB Molecule:methionyl-trna fmet formyltransferase;
PDBTitle: methionyl-trnafmet formyltransferase from escherichia coli
8c1s3iA_



100.0 23
PDB header:hydrolase, oxidoreductase
Chain: A: PDB Molecule:10-formyltetrahydrofolate dehydrogenase;
PDBTitle: crystal structure of the n terminal hydrolase domain of 10-2 formyltetrahydrofolate dehydrogenase
9c3q0iA_



100.0 23
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: methionyl-trna formyltransferase from vibrio cholerae
10c5uaiA_



100.0 22
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: crystal structure of methionyl-trna formyltransferase from pseudomonas2 aeruginosa
11c1yrwA_



100.0 23
PDB header:transferase
Chain: A: PDB Molecule:protein arna;
PDBTitle: crystal structure of e.coli arna transformylase domain
12c3rfoA_



100.0 24
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: crystal structure of methyionyl-trna formyltransferase from bacillus2 anthracis
13c5vytD_



100.0 20
PDB header:transferase
Chain: D: PDB Molecule:gdp-mannose 4,6-dehydratase / gdp-4-amino-4,6-dideoxy-d-
PDBTitle: crystal structure of the wbkc n-formyltransferase (f142a variant) from2 brucella melitensis
14c1zghA_



100.0 15
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: methionyl-trna formyltransferase from clostridium thermocellum
15c4lxuB_



100.0 17
PDB header:transferase
Chain: B: PDB Molecule:wlard, a sugar 3n-formyl transferase;
PDBTitle: dtdp-fuc3n and 5-n-formyl-thf
16c5uimB_



100.0 20
PDB header:transferase
Chain: B: PDB Molecule:formyltransferase;
PDBTitle: x-ray structure of the fdtf n-formyltransferase from salmonella2 enteric o60 in complex with folinic acid and tdp-qui3n
17d1s3ia2



100.0 23
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
18c6ci2A_



100.0 26
PDB header:transferase
Chain: A: PDB Molecule:formyltransferase psej;
PDBTitle: crystal structure of the formyltransferase psej from anoxybacillus2 kamchatkensis
19d2bw0a2



100.0 23
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
20d2blna2



100.0 23
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
21c3kcqA_



not modelled 100.0 20
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 anaplasma phagocytophilum
22d1fmta2



not modelled 100.0 24
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
23d1jkxa_



not modelled 100.0 18
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
24c3aufA_



not modelled 100.0 21
PDB header:transferase
Chain: A: PDB Molecule:glycinamide ribonucleotide transformylase 1;
PDBTitle: crystal structure of glycinamide ribonucleotide transformylase 1 from2 symbiobacterium toebii
25c2ywrA_



not modelled 100.0 16
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: crystal structure of gar transformylase from aquifex aeolicus
26c3p9xB_



not modelled 100.0 22
PDB header:transferase
Chain: B: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 bacillus halodurans
27c3tqrA_



not modelled 100.0 18
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: structure of the phosphoribosylglycinamide formyltransferase (purn) in2 complex with ches from coxiella burnetii
28c3av3A_



not modelled 100.0 20
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: crystal structure of glycinamide ribonucleotide transformylase 1 from2 geobacillus kaustophilus
29c3louB_



not modelled 100.0 22
PDB header:hydrolase
Chain: B: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution
30c3n0vD_



not modelled 100.0 23
PDB header:hydrolase
Chain: D: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution
31c3dcjA_



not modelled 100.0 22
PDB header:transferase
Chain: A: PDB Molecule:probable 5'-phosphoribosylglycinamide formyltransferase
PDBTitle: crystal structure of glycinamide formyltransferase (purn) from2 mycobacterium tuberculosis in complex with 5-methyl-5,6,7,8-3 tetrahydrofolic acid derivative
32c3w7bB_



not modelled 100.0 20
PDB header:hydrolase
Chain: B: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of formyltetrahydrofolate deformylase from thermus2 thermophilus hb8
33d1meoa_



not modelled 100.0 15
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
34c4ds3A_



not modelled 100.0 21
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 brucella melitensis
35c3obiC_



not modelled 100.0 24
PDB header:hydrolase
Chain: C: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (np_949368)2 from rhodopseudomonas palustris cga009 at 1.95 a resolution
36c3o1lB_



not modelled 100.0 23
PDB header:hydrolase
Chain: B: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution
37c3nrbD_



not modelled 100.0 26
PDB header:hydrolase
Chain: D: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (puru,2 pp_1943) from pseudomonas putida kt2440 at 2.05 a resolution
38c4s1nA_



not modelled 100.0 23
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: the crystal structure of phosphoribosylglycinamide formyltransferase2 from streptococcus pneumoniae tigr4
39c5cjjA_



not modelled 100.0 18
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: the crystal structure of phosphoribosylglycinamide formyltransferase2 from campylobacter jejuni subsp. jejuni nctc 11168
40d1zgha2



not modelled 100.0 16
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
41c4xd0A_



not modelled 99.9 20
PDB header:transferase
Chain: A: PDB Molecule:tdp-3-aminoquinovose-n-formyltransferase;
PDBTitle: x-ray structure of the n-formyltransferase qdtf from providencia2 alcalifaciens
42d1s3ia1



not modelled 98.7 15
Fold:FMT C-terminal domain-like
Superfamily:FMT C-terminal domain-like
Family:Post formyltransferase domain
43d2bw0a1



not modelled 98.6 13
Fold:FMT C-terminal domain-like
Superfamily:FMT C-terminal domain-like
Family:Post formyltransferase domain
44d2blna1



not modelled 98.5 20
Fold:FMT C-terminal domain-like
Superfamily:FMT C-terminal domain-like
Family:Post formyltransferase domain
45d1fmta1



not modelled 98.4 17
Fold:FMT C-terminal domain-like
Superfamily:FMT C-terminal domain-like
Family:Post formyltransferase domain
46c6culG_



not modelled 97.6 22
PDB header:transferase
Chain: G: PDB Molecule:pyoverdine synthetase f;
PDBTitle: pvdf of pyoverdin biosynthesis is a structurally unique n10-2 formyltetrahydrofolate-dependent formyltransferase
47d1zgha1



not modelled 95.0 12
Fold:FMT C-terminal domain-like
Superfamily:FMT C-terminal domain-like
Family:Post formyltransferase domain
48d1vlva2



not modelled 64.8 15
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
49c2xd4A_



not modelled 62.9 13
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase
50c5ig9H_



not modelled 61.9 16
PDB header:ligase
Chain: H: PDB Molecule:atp grasp ligase;
PDBTitle: crystal structure of macrocyclase mdnc bound with precursor peptide2 mdna from microcystis aeruginosa mrc
51c6p2iA_



not modelled 61.6 10
PDB header:oxidoreductase, biosynthetic protein
Chain: A: PDB Molecule:glycerate dehydrogenase;
PDBTitle: acyclic imino acid reductase (bsp5) in complex with nadph and d-arg
52d1gsoa2



not modelled 60.6 21
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
53d1pvva2



not modelled 60.6 14
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
54c2yyaB_



not modelled 57.6 16
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of gar synthetase from aquifex aeolicus
55c3d8tB_



not modelled 57.5 17
PDB header:lyase
Chain: B: PDB Molecule:uroporphyrinogen-iii synthase;
PDBTitle: thermus thermophilus uroporphyrinogen iii synthase
56d2at2a2



not modelled 57.4 23
Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
57c1vkzA_



not modelled 53.5 16
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution
58c2l2qA_



not modelled 53.5 24
PDB header:transferase
Chain: A: PDB Molecule:pts system, cellobiose-specific iib component (cela);
PDBTitle: solution structure of cellobiose-specific phosphotransferase iib2 component protein from borrelia burgdorferi
59c4mgeB_



not modelled 52.2 18
PDB header:transferase
Chain: B: PDB Molecule:pts system, cellobiose-specific iib component;
PDBTitle: 1.85 angstrom resolution crystal structure of pts system cellobiose-2 specific transporter subunit iib from bacillus anthracis.
60c3gg9C_



not modelled 50.8 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase oxidoreductase protein;
PDBTitle: crystal structure of putative d-3-phosphoglycerate dehydrogenase2 oxidoreductase from ralstonia solanacearum
61c3vpbC_



not modelled 50.3 17
PDB header:ligase
Chain: C: PDB Molecule:putative acetylornithine deacetylase;
PDBTitle: argx from sulfolobus tokodaii complexed with2 lysw/glu/adp/mg/zn/sulfate
62c3nbmA_



not modelled 50.1 13
PDB header:transferase
Chain: A: PDB Molecule:pts system, lactose-specific iibc components;
PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae.
63c2p2gD_



not modelled 48.7 14
PDB header:transferase
Chain: D: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: crystal structure of ornithine carbamoyltransferase from mycobacterium2 tuberculosis (rv1656): orthorhombic form
64d1wd7a_



not modelled 45.7 18
Fold:HemD-like
Superfamily:HemD-like
Family:HemD-like
65d1vkza2



not modelled 45.2 23
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
66c5es8A_



not modelled 42.0 28
PDB header:ligase
Chain: A: PDB Molecule:linear gramicidin synthetase subunit a;
PDBTitle: crystal structure of the initiation module of lgra in the thiolation2 state
67d1dxya2



not modelled 41.8 13
Fold:Flavodoxin-like
Superfamily:Formate/glycerate dehydrogenase catalytic domain-like
Family:Formate/glycerate dehydrogenases, substrate-binding domain
68c1jr2A_



not modelled 40.7 11
PDB header:lyase
Chain: A: PDB Molecule:uroporphyrinogen-iii synthase;
PDBTitle: structure of uroporphyrinogen iii synthase
69d1jr2a_



not modelled 40.7 11
Fold:HemD-like
Superfamily:HemD-like
Family:HemD-like
70c1gsoA_



not modelled 38.2 16
PDB header:ligase
Chain: A: PDB Molecule:protein (glycinamide ribonucleotide synthetase);
PDBTitle: glycinamide ribonucleotide synthetase (gar-syn) from e.2 coli.
71c4njmA_



not modelled 37.2 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase, putative;
PDBTitle: crystal structure of phosphoglycerate bound 3-phosphoglycerate2 dehydrogenase in entamoeba histolytica
72c4s1vD_



not modelled 36.0 11
PDB header:oxidoreductase
Chain: D: PDB Molecule:d-3-phosphoglycerate dehydrogenase-related protein;
PDBTitle: crystal structure of phosphoglycerate oxidoreductase from vibrio2 cholerae o395
73c6jnkA_



not modelled 35.4 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-arabinose 1-dehydrogenase (nad(p)(+));
PDBTitle: crystal structure of azospirillum brasilense l-arabinose 1-2 dehydrogenase (nadp-bound form)
74c1a1sA_



not modelled 34.4 14
PDB header:transcarbamylase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: ornithine carbamoyltransferase from pyrococcus furiosus
75c3lp8A_



not modelled 33.9 13
PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylamine-glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from2 ehrlichia chaffeensis
76c1vlvA_



not modelled 31.2 13
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase;
PDBTitle: crystal structure of ornithine carbamoyltransferase (tm1097) from2 thermotoga maritima at 2.25 a resolution
77c5vevB_



not modelled 29.4 25
PDB header:ligase
Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase;
PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from neisseria2 gonorrhoeae
78d1gsaa1



not modelled 29.3 19
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:Prokaryotic glutathione synthetase, N-terminal domain
79d1eqza_



not modelled 28.9 14
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
80c3e9mC_



not modelled 27.0 19
PDB header:oxidoreductase
Chain: C: PDB Molecule:oxidoreductase, gfo/idh/moca family;
PDBTitle: crystal structure of an oxidoreductase from enterococcus2 faecalis
81d1ybha1



not modelled 26.1 15
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Pyruvate oxidase and decarboxylase, middle domain
82c1ks9A_



not modelled 25.5 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-dehydropantoate 2-reductase;
PDBTitle: ketopantoate reductase from escherichia coli
83c1xdwA_



not modelled 24.3 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:nad+-dependent (r)-2-hydroxyglutarate
PDBTitle: nad+-dependent (r)-2-hydroxyglutarate dehydrogenase from2 acidaminococcus fermentans
84c2w37A_



not modelled 24.0 9
PDB header:transferase
Chain: A: PDB Molecule:ornithine carbamoyltransferase, catabolic;
PDBTitle: crystal structure of the hexameric catabolic ornithine2 transcarbamylase from lactobacillus hilgardii
85c2f8nK_



not modelled 23.9 22
PDB header:structural protein/dna
Chain: K: PDB Molecule:histone h2a type 1;
PDBTitle: 2.9 angstrom x-ray structure of hybrid macroh2a nucleosomes
86c1dxyA_



not modelled 23.7 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase;
PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase
87c4ew6A_



not modelled 23.6 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-galactose-1-dehydrogenase protein;
PDBTitle: crystal structure of d-galactose-1-dehydrogenase protein from2 rhizobium etli
88d1aoic_



not modelled 23.5 22
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
89c1tltB_



not modelled 23.5 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase (virulence factor mvim homolog);
PDBTitle: crystal structure of a putative oxidoreductase (virulence factor mvim2 homolog)
90d1ydga_



not modelled 22.9 18
Fold:Flavodoxin-like
Superfamily:Flavoproteins
Family:WrbA-like
91d1kx3c_



not modelled 22.6 22
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
92c3l7nA_



not modelled 22.4 15
PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of smu.1228c
93d2gk3a1



not modelled 21.7 25
Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:STM3548-like
94c2wmkB_



not modelled 20.9 16
PDB header:hydrolase
Chain: B: PDB Molecule:fucolectin-related protein;
PDBTitle: crystal structure of the catalytic module of a family 982 glycoside hydrolase from streptococcus pneumoniae sp3-bs713 (sp3gh98) in complex with the a-lewisy pentasaccharide4 blood group antigen.
95d1id3c_



not modelled 20.9 33
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
96d1tzya_



not modelled 20.8 22
Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
97c2z04A_



not modelled 20.5 17
PDB header:lyase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase
PDBTitle: crystal structure of phosphoribosylaminoimidazole2 carboxylase atpase subunit from aquifex aeolicus
98c5b3uB_



not modelled 20.3 6
PDB header:transferase
Chain: B: PDB Molecule:biliverdin reductase;
PDBTitle: crystal structure of biliverdin reductase in complex with nadp+ from2 synechocystis sp. pcc 6803
99d1xi3a_



not modelled 20.0 13
Fold:TIM beta/alpha-barrel
Superfamily:Thiamin phosphate synthase
Family:Thiamin phosphate synthase

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