Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3406_(-)_3825510_3826397
DateFri Aug 9 18:20:07 BST 2019
Unique Job ID3908a605cf52cdeb
SequenceMTDLITVKKL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:39.732 Y:43.057 Z:57.279
Model (left) based on template c3r1jB_
Top template information
PDB header:oxidoreductase
Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of alpha-ketoglutarate-dependent taurine dioxygenase2 from mycobacterium avium, native form
Confidence and coverage
Confidence:100.0% Coverage: 82%
241 residues ( 82% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3r1jB_



100.0 83
PDB header:oxidoreductase
Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of alpha-ketoglutarate-dependent taurine dioxygenase2 from mycobacterium avium, native form
2c5hsxB_



100.0 45
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of a putative alpha-ketoglutarate-dependent taurine2 dioxygenase from burkholderia xenovorans
3c4y0eB_



100.0 56
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative dioxygenase;
PDBTitle: x-ray crystal structure of a putative dioxygenase from mycobacterium2 abscessus
4d1oiha_



100.0 56
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:TauD/TfdA-like
5d1otja_



100.0 36
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:TauD/TfdA-like
6c4j5iH_



100.0 67
PDB header:oxidoreductase
Chain: H: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of an alpha-ketoglutarate-dependent taurine2 dioxygenase from mycobacterium smegmatis
7c3pvjB_



100.0 37
PDB header:oxidoreductase
Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase;
PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent taurine2 dioxygenase from pseudomonas putida kt2440
8c6d1oD_



100.0 32
PDB header:oxidoreductase
Chain: D: PDB Molecule:(r)-phenoxypropionate/alpha-ketoglutarate-dioxygenase;
PDBTitle: ft_5 dioxygenase apoenzyme
9c5j92B_



100.0 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative alpha kg dependent 2,4-d dioxygenase;
PDBTitle: crystal structure of a putative alpha-ketoglutarate dependent 2,4-d2 dioxygenase from burkholderia xenovorans
10c5bkeF_



100.0 28
PDB header:oxidoreductase
Chain: F: PDB Molecule:alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate
PDBTitle: crystal structure of aad-2 in complex with mn(ii) and n-oxalylglycine
11c5vn6B_



100.0 38
PDB header:oxidoreductase
Chain: B: PDB Molecule:taurine dioxygenase;
PDBTitle: crystal structure of taurine dioxygenase from burkholderia ambifaria
12c6dchA_



100.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:scoe protein;
PDBTitle: structure of isonitrile biosynthesis enzyme scoe
13c3eatX_



100.0 19
PDB header:oxidoreductase
Chain: X: PDB Molecule:pyoverdine biosynthesis protein pvcb;
PDBTitle: crystal structure of the pvcb (pa2255) protein from2 pseudomonas aeruginosa
14d1nx4a_



100.0 21
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:gamma-Butyrobetaine hydroxylase
15d1y0za_



100.0 13
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:gamma-Butyrobetaine hydroxylase
16c3ms5A_



100.0 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:gamma-butyrobetaine dioxygenase;
PDBTitle: crystal structure of human gamma-butyrobetaine,2-oxoglutarate2 dioxygenase 1 (bbox1)
17c6npcB_



100.0 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:tmpa, 2-trimethylaminoethylphosphonate hydroxylase;
PDBTitle: x-ray crystal structure of tmpa, 2-trimethylaminoethylphosphonate2 hydroxylase, with fe, 2og, and 2-trimethylaminoethylphosphonate
18c6f6jC_



100.0 13
PDB header:oxidoreductase
Chain: C: PDB Molecule:l-lysine 3-hydroxylase;
PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent2 dioxygenase kdo1 with fe(ii)/succinate/(3s)-3-hydroxy-l-lysine
19d1ds1a_



100.0 18
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Clavaminate synthase
20c2og5A_



100.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxygenase;
PDBTitle: crystal structure of asparagine oxygenase (asno)
21d1jr7a_



not modelled 100.0 15
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Gab protein (hypothetical protein YgaT)
22c4ne0A_



not modelled 100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:l-arginine beta-hydroxylase;
PDBTitle: crystal structure of non-heme iron oxygenase orfp d157a mutant in2 complex with (3s)-hydroxy-l-arg
23c2wbqA_



not modelled 99.9 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-arginine beta-hydroxylase;
PDBTitle: crystal structure of vioc in complex with (2s,3s)-2 hydroxyarginine
24c4ne0B_



not modelled 99.9 19
PDB header:hydrolase
Chain: B: PDB Molecule:l-arginine beta-hydroxylase;
PDBTitle: crystal structure of non-heme iron oxygenase orfp d157a mutant in2 complex with (3s)-hydroxy-l-arg
25c6dawA_



not modelled 99.9 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:non-heme iron hydroxylase;
PDBTitle: x-ray crystal structure of napi l-arginine desaturase bound to fe(ii),2 l-arginine, and acetate
26c5eqnA_



not modelled 99.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:frbj;
PDBTitle: structure of phosphonate hydroxylase
27c6exhA_



not modelled 99.8 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-lysine 4-hydroxylase;
PDBTitle: crystal structure of the complex fe(ii)/alpha-ketoglutarate dependent2 dioxygenase kdo5 with fe(ii)/succinate/(4r)-4-hydroxy-l-lysine
28c2opwA_



not modelled 97.9 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:phyhd1 protein;
PDBTitle: crystal structure of human phytanoyl-coa dioxygenase phyhd1 (apo)
29c4xaaA_



not modelled 97.8 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxygenase;
PDBTitle: crystal structure of avio1 from streptomyces viridochromogenes tue57
30c5zm4B_



not modelled 97.7 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:dioxygenase anda;
PDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase anda with2 preandiloid c
31c4zonB_



not modelled 97.7 23
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: B: PDB Molecule:verruculogen synthase;
PDBTitle: structure of ftmox1 with fumitremorgen b complex
32c5m0tA_



not modelled 97.6 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-ketoglutarate-dependent non-heme iron oxygenase eash;
PDBTitle: alpha-ketoglutarate-dependent non-heme iron oxygenase eash
33c5erlD_



not modelled 97.6 20
PDB header:isomerase
Chain: D: PDB Molecule:snon,snon;
PDBTitle: crystal structure of the epimerase snon in complex with ni2+,2 succinate and nogalamycin ro
34c4naoA_



not modelled 97.6 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxygenase;
PDBTitle: crystal structure of eash
35c5epaE_



not modelled 97.2 18
PDB header:lyase
Chain: E: PDB Molecule:snok;
PDBTitle: crystal structure of non-heme alpha ketoglutarate dependent2 carbocyclase snok from nogalamycin biosynthesis
36c5ncjB_



not modelled 97.2 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:leucine hydroxylase;
PDBTitle: grie in complex with manganese, succinate and (2s,4r)-5-hydroxyleucine
37c2rdsA_



not modelled 97.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:1-deoxypentalenic acid 11-beta hydroxylase; fe(ii)/alpha-
PDBTitle: crystal structure of ptlh with fe/oxalylglycine and ent-1-2 deoxypentalenic acid bound
38d2a1xa1



not modelled 96.7 11
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:PhyH-like
39c4xabA_



not modelled 96.7 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:evdo2;
PDBTitle: crystal structure of evdo2 from micromonospora carbonacea var.2 aurantiaca
40c5daqA_



not modelled 96.6 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:phytanoyl-coa dioxygenase family protein (afu_orthologue
PDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase asqj in complex with2 4-methoxycyclopeptin
41c3emrA_



not modelled 96.4 8
PDB header:oxidoreductase
Chain: A: PDB Molecule:ectd;
PDBTitle: crystal structure analysis of the ectoine hydroxylase ectd from2 salibacillus salexigens
42c3gjbA_



not modelled 96.3 14
PDB header:biosynthetic protein
Chain: A: PDB Molecule:cytc3;
PDBTitle: cytc3 with fe(ii) and alpha-ketoglutarate
43c4xbzB_



not modelled 96.2 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:evdo1;
PDBTitle: crystal structure of evdo1 from micromonospora carbonacea var.2 aurantiaca
44c3nnlB_



not modelled 95.5 11
PDB header:biosynthetic protein
Chain: B: PDB Molecule:cura;
PDBTitle: halogenase domain from cura module (crystal form iii)
45c6ec3C_



not modelled 95.3 16
PDB header:transferase, oxidoreductase
Chain: C: PDB Molecule:methyltransferase domain-containing protein;
PDBTitle: crystal structure of evdmo1
46c5yboA_



not modelled 95.2 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:prha;
PDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase prha in complex with2 preaustinoid a1
47c4mhuB_



not modelled 95.2 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:ectoine hydroxylase;
PDBTitle: crystal structure of ectd from s. alaskensis with bound fe
48c4xc9B_



not modelled 95.1 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:oxidase/hydroxylase;
PDBTitle: crystal structure of apo hygx from streptomyces hygroscopicus
49c4iw3J_



not modelled 94.8 14
PDB header:metal binding protein/translation
Chain: J: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a pseudomonas putida prolyl-4-hydroxylase (p4h)2 in complex with elongation factor tu (ef-tu)
50c5c5tB_



not modelled 92.5 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:prolyl 4-hydroxylase;
PDBTitle: the crystal structure of viral collagen prolyl hydroxylase vcph from2 paramecium bursaria chlorella virus-1 - 2og complex
51d2fcta1



not modelled 89.9 16
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:PhyH-like
52c6f0wA_



not modelled 87.1 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:hif prolyl hydroxylase;
PDBTitle: prolyl hydroxylase in complex with hypoxia inducible factor oxygen2 degradation domain peptide fragment from trichoplax adhaerens
53d1wdia_



not modelled 82.0 22
Fold:QueA-like
Superfamily:QueA-like
Family:QueA-like
54c1yy3A_



not modelled 81.4 17
PDB header:isomerase
Chain: A: PDB Molecule:s-adenosylmethionine:trna ribosyltransferase-
PDBTitle: structure of s-adenosylmethionine:trna ribosyltransferase-2 isomerase (quea)
55c3itqB_



not modelled 81.2 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:prolyl 4-hydroxylase, alpha subunit domain protein;
PDBTitle: crystal structure of a prolyl 4-hydroxylase from bacillus anthracis
56d1vkya_



not modelled 79.2 17
Fold:QueA-like
Superfamily:QueA-like
Family:QueA-like
57c2jijA_



not modelled 65.4 12
PDB header:hydrolase
Chain: A: PDB Molecule:prolyl-4 hydroxylase;
PDBTitle: crystal structure of the apo form of chlamydomonas2 reinhardtii prolyl-4 hydroxylase type i
58c3pl0B_



not modelled 58.8 17
PDB header:biosynthetic protein
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a bsma homolog (mpe_a2762) from methylobium2 petroleophilum pm1 at 1.91 a resolution
59c2g19A_



not modelled 50.6 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:egl nine homolog 1;
PDBTitle: cellular oxygen sensing: crystal structure of hypoxia-inducible factor2 prolyl hydroxylase (phd2)
60c3ghfA_



not modelled 44.0 16
PDB header:cell cycle
Chain: A: PDB Molecule:septum site-determining protein minc;
PDBTitle: crystal structure of the septum site-determining protein minc from2 salmonella typhimurium
61c3ouiA_



not modelled 41.4 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:egl nine homolog 1;
PDBTitle: phd2-r717 with 40787422
62d2csga1



not modelled 41.3 11
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:YbiU-like
63d1gp6a_



not modelled 40.2 14
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
64d1odma_



not modelled 39.1 12
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
65d1dcsa_



not modelled 36.4 16
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
66c2a5hC_



not modelled 36.0 14
PDB header:isomerase
Chain: C: PDB Molecule:l-lysine 2,3-aminomutase;
PDBTitle: 2.1 angstrom x-ray crystal structure of lysine-2,3-aminomutase from2 clostridium subterminale sb4, with michaelis analog (l-alpha-lysine3 external aldimine form of pyridoxal-5'-phosphate).
67d2evra2



not modelled 29.2 18
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:NlpC/P60
68c3on7C_



not modelled 28.0 4
PDB header:oxidoreductase
Chain: C: PDB Molecule:oxidoreductase, iron/ascorbate family;
PDBTitle: crystal structure of a putative oxygenase (so_2589) from shewanella2 oneidensis at 2.20 a resolution
69c5c3qB_



not modelled 27.0 8
PDB header:oxidoreductase
Chain: B: PDB Molecule:thymine dioxygenase;
PDBTitle: crystal structure of the full-length neurospora crassa t7h in complex2 with alpha-kg and thymine (t)
70c4xaeB_



not modelled 24.5 6
PDB header:oxidoreductase
Chain: B: PDB Molecule:feruloyl coa ortho-hydroxylase 1;
PDBTitle: structure of feruloyl-coa 6-hydroxylase (f6h) from arabidopsis2 thaliana
71d16pka_



not modelled 24.4 33
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
72c3lfjB_



not modelled 24.1 7
PDB header:transferase
Chain: B: PDB Molecule:phosphotransferase system, mannose/fructose/n-
PDBTitle: crystal structure of manxb from thermoanaerobacter tengcongensis
73c2xivA_



not modelled 23.8 31
PDB header:structural protein
Chain: A: PDB Molecule:hypothetical invasion protein;
PDBTitle: structure of rv1477, hypothetical invasion protein of mycobacterium2 tuberculosis
74c3gt2A_



not modelled 22.9 25
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the p60 domain from m. avium paratuberculosis2 antigen map1272c
75c4i66A_



not modelled 22.3 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein hoch_4089;
PDBTitle: crystal structure of hoch_4089 protein from haliangium ochraceum
76c2fg0B_



not modelled 21.0 15
PDB header:hydrolase
Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion-
PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution
77c2dbiA_



not modelled 20.8 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ybiu;
PDBTitle: crystal structure of a hypothetical protein jw0805 from2 escherichia coli
78d1bvp12



not modelled 20.2 21
Fold:Viral protein domain
Superfamily:Viral protein domain
Family:Top domain of virus capsid protein
79c5gj9A_



not modelled 20.1 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:1-aminocyclopropane-1-carboxylate oxidase 2;
PDBTitle: crystal structure of arabidopsis thaliana aco2 in complex with poa
80c1zmrA_



not modelled 19.8 23
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of the e. coli phosphoglycerate kinase
81c2nnzA_



not modelled 19.6 28
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: solution structure of the hypothetical protein af2241 from2 archaeoglobus fulgidus
82d1phpa_



not modelled 18.6 27
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
83c4rgkA_



not modelled 18.3 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of putative phytanoyl-coa dioxygenase family protein2 ybiu from yersinia pestis
84d1hdia_



not modelled 18.1 27
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
85d2if6a1



not modelled 18.0 29
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:YiiX-like
86d1e5ra_



not modelled 17.3 25
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Type II Proline 3-hydroxylase (proline oxidase)
87c3pbiA_



not modelled 17.3 25
PDB header:hydrolase
Chain: A: PDB Molecule:invasion protein;
PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution
88d1ltka_



not modelled 16.9 13
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
89c3rcqA_



not modelled 16.8 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:aspartyl/asparaginyl beta-hydroxylase;
PDBTitle: crystal structure of human aspartate beta-hydroxylase isoform a
90d1un7a2



not modelled 16.8 8
Fold:TIM beta/alpha-barrel
Superfamily:Metallo-dependent hydrolases
Family:N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
91d1dt9a3



not modelled 16.5 12
Fold:N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
Superfamily:N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
Family:N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
92c3zlbA_



not modelled 16.4 23
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of phosphoglycerate kinase from streptococcus2 pneumoniae
93d1vpea_



not modelled 15.7 20
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
94d1fw8a_



not modelled 15.2 38
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
95c2cunA_



not modelled 15.2 38
PDB header:transferase
Chain: A: PDB Molecule:phosphoglycerate kinase;
PDBTitle: crystal structure of phosphoglycerate kinase from pyrococcus2 horikoshii ot3
96d1v6sa_



not modelled 15.2 31
Fold:Phosphoglycerate kinase
Superfamily:Phosphoglycerate kinase
Family:Phosphoglycerate kinase
97c4lvnP_



not modelled 15.0 12
PDB header:hydrolase/inhibitor/immune system
Chain: P: PDB Molecule:subtilisin-like serine protease;
PDBTitle: crystal structure of pfsub1-prodomain-nimp.m7 fab complex
98c6ax6B_



not modelled 14.8 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:procollagen lysyl hydroxylase and glycosyltransferase;
PDBTitle: the crystal structure of a lysyl hydroxylase from acanthamoeba2 polyphaga mimivirus
99c5buvC_



not modelled 14.8 33
PDB header:isomerase
Chain: C: PDB Molecule:putative epimerase;
PDBTitle: x-ray structure of wbca from yersinia enterocolitica

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