Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3417c_(groEL)_3835452_3837071
DateFri Aug 9 18:20:08 BST 2019
Unique Job IDd38a88a5fa9ea1e9
SequenceMSKLIEYDET ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:56.099 Y:56.467 Z:75.275
Model (left) based on template c1kp8B_
Top template information
PDB header:chaperone
Chain: B: PDB Molecule:groel protein;
PDBTitle: structural basis for groel-assisted protein folding from the crystal2 structure of (groel-kmgatp)14 at 2.0 a resolution
Confidence and coverage
Confidence:100.0% Coverage: 97%
523 residues ( 97% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1kp8B_



100.0 52
PDB header:chaperone
Chain: B: PDB Molecule:groel protein;
PDBTitle: structural basis for groel-assisted protein folding from the crystal2 structure of (groel-kmgatp)14 at 2.0 a resolution
2c1we3D_



100.0 54
PDB header:chaperone
Chain: D: PDB Molecule:cpn60(groel);
PDBTitle: crystal structure of the chaperonin complex cpn60/cpn10/(adp)7 from2 thermus thermophilus
3c4pj1E_



100.0 42
PDB header:chaperone
Chain: E: PDB Molecule:60 kda heat shock protein, mitochondrial;
PDBTitle: crystal structure of the human mitochondrial chaperonin symmetrical2 'football' complex
4c1iokE_



100.0 52
PDB header:chaperone
Chain: E: PDB Molecule:chaperonin 60;
PDBTitle: crystal structure of chaperonin-60 from paracoccus2 denitrificans
5c5cdiB_



100.0 46
PDB header:chaperone
Chain: B: PDB Molecule:chaperonin 60b1;
PDBTitle: chloroplast chaperonin 60b1 of chlamydomonas
6c5da8N_



100.0 50
PDB header:chaperone
Chain: N: PDB Molecule:60 kda chaperonin;
PDBTitle: crystal structure of chaperonin groel from
7c3p9ei_



100.0 19
PDB header:chaperone
Chain: I: PDB Molecule:
PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins
8c3iygE_



100.0 19
PDB header:chaperone
Chain: E: PDB Molecule:t-complex protein 1 subunit;
PDBTitle: ca model of bovine tric/cct derived from a 4.0 angstrom cryo-em map
9c4b2tQ_



100.0 22
PDB header:chaperone
Chain: Q: PDB Molecule:t-complex protein 1 subunit theta;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
10c1q2vA_



100.0 25
PDB header:chaperone
Chain: A: PDB Molecule:thermosome alpha subunit;
PDBTitle: crystal structure of the chaperonin from thermococcus strain ks-12 (nucleotide-free form)
11c3izkF_



100.0 29
PDB header:chaperone
Chain: F: PDB Molecule:chaperonin;
PDBTitle: mm-cpn rls deltalid with atp
12c3iygD_



100.0 24
PDB header:chaperone
Chain: D: PDB Molecule:t-complex protein 1 subunit delta;
PDBTitle: ca model of bovine tric/cct derived from a 4.0 angstrom cryo-em map
13c3ko1H_



100.0 22
PDB header:chaperone
Chain: H: PDB Molecule:chaperonin;
PDBTitle: cystal structure of thermosome from acidianus tengchongensis strain s5
14c3p9en_



100.0 20
PDB header:chaperone
Chain: N: PDB Molecule:
PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins
15c3iygA_



100.0 19
PDB header:chaperone
Chain: A: PDB Molecule:t-complex protein 1 subunit alpha;
PDBTitle: ca model of bovine tric/cct derived from a 4.0 angstrom cryo-em map
16c4b2tE_



100.0 23
PDB header:chaperone
Chain: E: PDB Molecule:t-complex protein 1 subunit epsilon;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
17c3iygZ_



100.0 20
PDB header:chaperone
Chain: Z: PDB Molecule:t-complex protein 1 subunit zeta;
PDBTitle: ca model of bovine tric/cct derived from a 4.0 angstrom cryo-em map
18c4b2tD_



100.0 25
PDB header:chaperone
Chain: D: PDB Molecule:t-complex protein 1 subunit delta;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
19c3p9eo_



100.0 18
PDB header:chaperone
Chain: O: PDB Molecule:
PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins
20c3iygG_



100.0 18
PDB header:chaperone
Chain: G: PDB Molecule:t-complex protein 1 subunit gamma;
PDBTitle: ca model of bovine tric/cct derived from a 4.0 angstrom cryo-em map
21c3losC_



not modelled 100.0 27
PDB header:chaperone
Chain: C: PDB Molecule:chaperonin;
PDBTitle: atomic model of mm-cpn in the closed state
22c3p9dL_



not modelled 100.0 21
PDB header:chaperone
Chain: L: PDB Molecule:t-complex protein 1 subunit delta;
PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins
23c3p9ee_



not modelled 100.0 18
PDB header:chaperone
Chain: E: PDB Molecule:
PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins
24c4b2tA_



not modelled 100.0 23
PDB header:chaperone
Chain: A: PDB Molecule:t-complex protein 1 subunit alpha;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
25c1a6eA_



not modelled 100.0 23
PDB header:chaperonin
Chain: A: PDB Molecule:thermosome (alpha subunit);
PDBTitle: thermosome-mg-adp-alf3 complex
26c3j1bA_



not modelled 100.0 22
PDB header:chaperone
Chain: A: PDB Molecule:chaperonin alpha subunit;
PDBTitle: cryo-em structure of 8-fold symmetric ratcpn-alpha in apo state
27c3iygQ_



not modelled 100.0 19
PDB header:chaperone
Chain: Q: PDB Molecule:t-complex protein 1 subunit theta;
PDBTitle: ca model of bovine tric/cct derived from a 4.0 angstrom cryo-em map
28c4b2tH_



not modelled 100.0 20
PDB header:chaperone
Chain: H: PDB Molecule:t-complex protein 1 subunit eta;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
29c4xcgB_



not modelled 100.0 27
PDB header:chaperone
Chain: B: PDB Molecule:thermosome subunit beta;
PDBTitle: crystal structure of a hexadecameric tf55 complex from s.2 solfataricus, crystal form i
30c3kttB_



not modelled 100.0 22
PDB header:chaperone
Chain: B: PDB Molecule:t-complex protein 1 subunit beta;
PDBTitle: atomic model of bovine tric cct2(beta) subunit derived from a 4.02 angstrom cryo-em map
31c4b2tG_



not modelled 100.0 19
PDB header:chaperone
Chain: G: PDB Molecule:t-complex protein 1 subunit gamma;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
32c3iygH_



not modelled 100.0 19
PDB header:chaperone
Chain: H: PDB Molecule:t-complex protein 1 subunit eta;
PDBTitle: ca model of bovine tric/cct derived from a 4.0 angstrom cryo-em map
33c1sjpA_



not modelled 100.0 59
PDB header:chaperone
Chain: A: PDB Molecule:60 kda chaperonin 2;
PDBTitle: mycobacterium tuberculosis chaperonin60.2
34c3p9eb_



not modelled 100.0 22
PDB header:chaperone
Chain: B: PDB Molecule:
PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins
35c3p9ec_



not modelled 100.0 19
PDB header:chaperone
Chain: C: PDB Molecule:
PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins
36c1a6eB_



not modelled 100.0 22
PDB header:chaperonin
Chain: B: PDB Molecule:thermosome (beta subunit);
PDBTitle: thermosome-mg-adp-alf3 complex
37c4xciB_



not modelled 100.0 29
PDB header:chaperone
Chain: B: PDB Molecule:thermosome subunit beta;
PDBTitle: crystal structure of a hexadecameric tf55 complex from s.2 solfataricus, crystal form ii
38c5x9vA_



not modelled 100.0 24
PDB header:chaperone
Chain: A: PDB Molecule:thermosome, alpha subunit;
PDBTitle: crystal structure of group iii chaperonin in the closed state
39c3p9dP_



not modelled 100.0 18
PDB header:chaperone
Chain: P: PDB Molecule:t-complex protein 1 subunit theta;
PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins
40c3rtkA_



not modelled 100.0 61
PDB header:chaperone
Chain: A: PDB Molecule:60 kda chaperonin 2;
PDBTitle: crystal structure of cpn60.2 from mycobacterium tuberculosis at 2.8a
41c4b2tq_



not modelled 100.0 22
PDB header:chaperone
Chain: Q: PDB Molecule:t-complex protein 1 subunit theta;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
42c4b2th_



not modelled 100.0 27
PDB header:chaperone
Chain: H: PDB Molecule:t-complex protein 1 subunit eta;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
43c4b2tg_



not modelled 100.0 21
PDB header:chaperone
Chain: G: PDB Molecule:t-complex protein 1 subunit gamma;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
44c4b2ta_



not modelled 100.0 25
PDB header:chaperone
Chain: A: PDB Molecule:t-complex protein 1 subunit alpha;
PDBTitle: the crystal structures of the eukaryotic chaperonin cct2 reveal its functional partitioning
45c4xciA_



not modelled 100.0 28
PDB header:chaperone
Chain: A: PDB Molecule:thermosome subunit alpha;
PDBTitle: crystal structure of a hexadecameric tf55 complex from s.2 solfataricus, crystal form ii
46c3aq1B_



not modelled 100.0 25
PDB header:chaperone
Chain: B: PDB Molecule:thermosome subunit;
PDBTitle: open state monomer of a group ii chaperonin from methanococcoides2 burtonii
47d1q3qa1



not modelled 100.0 36
Fold:GroEL equatorial domain-like
Superfamily:GroEL equatorial domain-like
Family:Group II chaperonin (CCT, TRIC), ATPase domain
48d1a6db1



not modelled 100.0 34
Fold:GroEL equatorial domain-like
Superfamily:GroEL equatorial domain-like
Family:Group II chaperonin (CCT, TRIC), ATPase domain
49d1a6da1



not modelled 100.0 34
Fold:GroEL equatorial domain-like
Superfamily:GroEL equatorial domain-like
Family:Group II chaperonin (CCT, TRIC), ATPase domain
50d1we3a1



not modelled 100.0 59
Fold:GroEL equatorial domain-like
Superfamily:GroEL equatorial domain-like
Family:GroEL chaperone, ATPase domain
51d1kp8a1



not modelled 100.0 62
Fold:GroEL equatorial domain-like
Superfamily:GroEL equatorial domain-like
Family:GroEL chaperone, ATPase domain
52d1ioka1



not modelled 100.0 55
Fold:GroEL equatorial domain-like
Superfamily:GroEL equatorial domain-like
Family:GroEL chaperone, ATPase domain
53d1sjpa1



not modelled 100.0 45
Fold:GroEL equatorial domain-like
Superfamily:GroEL equatorial domain-like
Family:GroEL chaperone, ATPase domain
54c3m6cA_



not modelled 99.9 100
PDB header:chaperone
Chain: A: PDB Molecule:60 kda chaperonin 1;
PDBTitle: crystal structure of mycobacterium tuberculosis groel1 apical domain
55d1kida_



not modelled 99.9 53
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:GroEL-like chaperone, apical domain
56d1we3a2



not modelled 99.9 56
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:GroEL-like chaperone, apical domain
57d1sjpa2



not modelled 99.9 64
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:GroEL-like chaperone, apical domain
58c5cdjA_



not modelled 99.9 41
PDB header:chaperone
Chain: A: PDB Molecule:rubisco large subunit-binding protein subunit alpha,
PDBTitle: apical domain of chloroplast chaperonin 60a
59d1oela2



not modelled 99.9 53
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:GroEL-like chaperone, apical domain
60d1dk7a_



not modelled 99.8 56
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:GroEL-like chaperone, apical domain
61d1srva_



not modelled 99.8 58
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:GroEL-like chaperone, apical domain
62d1ioka2



not modelled 99.5 59
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:GroEL-like chaperone, apical domain
63d1gmla_



not modelled 99.2 14
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:Group II chaperonin (CCT, TRIC), apical domain
64d1assa_



not modelled 98.9 16
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:Group II chaperonin (CCT, TRIC), apical domain
65d1q3qa2



not modelled 98.7 17
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:Group II chaperonin (CCT, TRIC), apical domain
66d1a6db2



not modelled 98.6 15
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:GroEL apical domain-like
Family:Group II chaperonin (CCT, TRIC), apical domain
67d1sjpa3



not modelled 98.4 36
Fold:GroEL-intermediate domain like
Superfamily:GroEL-intermediate domain like
Family:GroEL-like chaperone, intermediate domain
68d1a6db3



not modelled 98.2 12
Fold:GroEL-intermediate domain like
Superfamily:GroEL-intermediate domain like
Family:Group II chaperonin (CCT, TRIC), intermediate domain
69d1kp8a3



not modelled 98.1 35
Fold:GroEL-intermediate domain like
Superfamily:GroEL-intermediate domain like
Family:GroEL-like chaperone, intermediate domain
70d1a6da3



not modelled 97.9 13
Fold:GroEL-intermediate domain like
Superfamily:GroEL-intermediate domain like
Family:Group II chaperonin (CCT, TRIC), intermediate domain
71d1q3qa3



not modelled 97.9 18
Fold:GroEL-intermediate domain like
Superfamily:GroEL-intermediate domain like
Family:Group II chaperonin (CCT, TRIC), intermediate domain
72d1ioka3



not modelled 96.9 49
Fold:GroEL-intermediate domain like
Superfamily:GroEL-intermediate domain like
Family:GroEL-like chaperone, intermediate domain
73d1we3a3



not modelled 96.3 36
Fold:GroEL-intermediate domain like
Superfamily:GroEL-intermediate domain like
Family:GroEL-like chaperone, intermediate domain
74d1vl2a2



not modelled 17.4 17
Fold:Argininosuccinate synthetase, C-terminal domain
Superfamily:Argininosuccinate synthetase, C-terminal domain
Family:Argininosuccinate synthetase, C-terminal domain
75c3nrdB_



not modelled 13.4 8
PDB header:nucleotide binding protein
Chain: B: PDB Molecule:histidine triad (hit) protein;
PDBTitle: crystal structure of a histidine triad (hit) protein (smc02904) from2 sinorhizobium meliloti 1021 at 2.06 a resolution
76d1a6qa1



not modelled 12.5 14
Fold:Another 3-helical bundle
Superfamily:Protein serine/threonine phosphatase 2C, C-terminal domain
Family:Protein serine/threonine phosphatase 2C, C-terminal domain
77c3tekA_



not modelled 11.8 36
PDB header:dna binding protein
Chain: A: PDB Molecule:thermodbp-single stranded dna binding protein;
PDBTitle: thermodbp: a non-canonical single-stranded dna binding protein with a2 novel structure and mechanism
78c4zn6B_



not modelled 11.6 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase;
PDBTitle: x-ray crystal structure of 1-deoxy-d-xylulose 5-phosphate2 reductoisomerase (ispc) from acinetobacter baumannii
79c5ujmB_



not modelled 10.6 9
PDB header:replication
Chain: B: PDB Molecule:origin recognition complex subunit 2;
PDBTitle: structure of the active form of human origin recognition complex and2 its atpase motor module
80c4c53A_



not modelled 9.9 10
PDB header:viral protein
Chain: A: PDB Molecule:pre-glycoprotein polyprotein gp complex;
PDBTitle: crystal structure of guanarito virus gp2 in the post-fusion2 conformation
81c3mkoA_



not modelled 9.8 21
PDB header:viral protein
Chain: A: PDB Molecule:glycoprotein c;
PDBTitle: crystal structure of the lymphocytic choriomeningitis virus membrane2 fusion glycoprotein gp2 in its postfusion conformation
82d2hq4a1



not modelled 9.6 24
Fold:PH1570-like
Superfamily:PH1570-like
Family:PH1570-like
83d1j20a2



not modelled 9.3 17
Fold:Argininosuccinate synthetase, C-terminal domain
Superfamily:Argininosuccinate synthetase, C-terminal domain
Family:Argininosuccinate synthetase, C-terminal domain
84c5kqoA_



not modelled 9.2 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase;
PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from vibrio vulnificus
85c6jqsA_



not modelled 8.8 17
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding response regulator;
PDBTitle: structure of transcription factor, gere
86c3kinB_



not modelled 8.7 19
PDB header:motor protein
Chain: B: PDB Molecule:kinesin heavy chain;
PDBTitle: kinesin (dimeric) from rattus norvegicus
87d1fita_



not modelled 8.5 3
Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
88d1n1ea1



not modelled 8.2 12
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:Glycerol-3-phosphate dehydrogenase
89c3au9A_



not modelled 7.7 18
PDB header:isomerase/isomerase inhibitor
Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase;
PDBTitle: crystal structure of the quaternary complex-1 of an isomerase
90c2k37A_



not modelled 7.6 11
PDB header:photosynthesis
Chain: A: PDB Molecule:chlorosome protein a;
PDBTitle: csma
91c4mjsQ_



not modelled 7.5 15
PDB header:transferase/protein binding
Chain: Q: PDB Molecule:protein kinase c zeta type;
PDBTitle: crystal structure of a pb1 complex
92c3i24B_



not modelled 7.5 6
PDB header:hydrolase
Chain: B: PDB Molecule:hit family hydrolase;
PDBTitle: crystal structure of a hit family hydrolase protein from vibrio2 fischeri. northeast structural genomics consortium target id vfr176
93c1ddiA_



not modelled 7.3 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:sulfite reductase [nadph] flavoprotein alpha-component;
PDBTitle: crystal structure of sir-fp60
94d1q0qa3



not modelled 7.0 24
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Dihydrodipicolinate reductase-like
95d1cf7b_



not modelled 6.9 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Cell cycle transcription factor e2f-dp
96c4wgiA_



not modelled 6.8 11
PDB header:apoptosis/inhibitor
Chain: A: PDB Molecule:maltose-binding periplasmic protein,induced myeloid
PDBTitle: a single diastereomer of a macrolactam core binds specifically to2 myeloid cell leukemia 1 (mcl1)
97c2kinB_



not modelled 6.8 12
PDB header:motor protein
Chain: B: PDB Molecule:kinesin;
PDBTitle: kinesin (monomeric) from rattus norvegicus
98d2caza1



not modelled 6.8 14
Fold:Long alpha-hairpin
Superfamily:Endosomal sorting complex assembly domain
Family:VPS23 C-terminal domain
99c2cazD_



not modelled 6.7 14
PDB header:protein transport
Chain: D: PDB Molecule:suppressor protein stp22 of temperature-sensitive alpha-
PDBTitle: escrt-i core

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Transmembrane helix prediction 

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