Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3425_(PPE57)_3842419_3842949
DateFri Aug 9 18:20:09 BST 2019
Unique Job ID8721d7ffd9091fb9
SequenceMHPMIPAEYI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:57.328 Y:37.788 Z:97.147
Model (left) based on template c2g38B_
Top template information
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 97%
171 residues ( 97% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2g38B_
100.0 33
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
2d2g38b1
100.0 33
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c5xfsB_
100.0 34
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
4c4xy3A_
100.0 16
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
99.3 17
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
98.4 14
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c3gvmA_
98.3 18
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
8c4iogD_
98.3 15
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
9c3zbhC_
98.2 18
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
97.7 19
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsA_
97.6 15
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12c4lwsB_
97.5 13
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
13d1wa8b1
97.3 16
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
14c4i0xA_
96.7 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
15c2kg7B_
96.1 10
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4i0xJ_
89.1 14
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17c3q4hB_
43.5 9
PDB header:metal transport
Chain: B: PDB Molecule:low molecular weight protein antigen 7;
PDBTitle: crystal structure of the mycobacterium smegmatis esxgh complex2 (msmeg_0620-msmeg_0621)
18c1xyr6_
18.7 31
PDB header:virus
Chain: 6: PDB Molecule:genome polyprotein, coat protein vp3;
PDB Fragment:residues 620-630 PDBTitle: poliovirus 135s cell entry intermediate
19d2ix0a4
15.8 22
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:RNB domain-like
20c2iu1A_
14.6 14
PDB header:transcription
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of eif5 c-terminal domain
21c3p5tE_
not modelled 13.9 40
PDB header:rna binding protein
Chain: E: PDB Molecule:cleavage and polyadenylation specificity factor subunit 5;
PDBTitle: cfim25-cfim68 complex
22d2gtsa1
not modelled 13.2 13
Fold:Ferritin-like
Superfamily:HP0062-like
Family:HP0062-like
23d2r7da2
not modelled 13.2 18
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:RNB domain-like
24d2vnud4
not modelled 13.0 11
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:RNB domain-like
25c1bkvA_
not modelled 12.7 19
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
26c1bkvC_
not modelled 11.9 19
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
27c1bkvB_
not modelled 11.9 19
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
28c2r7fA_
not modelled 10.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease ii family protein;
PDBTitle: crystal structure of ribonuclease ii family protein from deinococcus2 radiodurans, hexagonal crystal form. northeast structural genomics3 target drr63
29c2fulE_
not modelled 10.2 19
PDB header:translation
Chain: E: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of the c-terminal domain of s. cerevisiae eif5
30c3h6pD_
not modelled 9.1 13
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:esat-6-like protein esxr;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
31d1pj3a2
not modelled 9.0 9
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Malic enzyme N-domain
32c2j8qB_
not modelled 8.6 40
PDB header:nuclear protein
Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 5;
PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion.
33d1gq2a2
not modelled 8.2 18
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Malic enzyme N-domain
34c5b5et_
not modelled 8.2 56
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure analysis of photosystem ii complex
35c4il6T_
not modelled 8.2 56
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: structure of sr-substituted photosystem ii
36c1s5lT_
not modelled 8.1 56
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii psbt protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
37c1s5lt_
not modelled 8.1 56
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii psbt protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
38d1o0sa2
not modelled 7.9 18
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Malic enzyme N-domain
39c4ixqt_
not modelled 7.7 56
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt fs x-ray diffraction of photosystem ii, dark state
40c4tniT_
not modelled 7.7 56
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
41c4ixrt_
not modelled 7.7 56
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt fs x-ray diffraction of photosystem ii, first illuminated state
42c3prrT_
not modelled 7.7 56
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer
43c3bz1T_
not modelled 7.7 56
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 1 of 2). this2 file contains first monomer of psii dimer
44c4tnjT_
not modelled 7.7 56
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
45c4tnkT_
not modelled 7.7 56
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
46c4tnjt_
not modelled 7.7 56
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
47c4tnht_
not modelled 7.7 56
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
48c4fbyT_
not modelled 7.7 56
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: fs x-ray diffraction of photosystem ii
49c4tnhT_
not modelled 7.7 56
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
50c4ixrT_
not modelled 7.7 56
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt fs x-ray diffraction of photosystem ii, first illuminated state
51c4ixqT_
not modelled 7.7 56
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt fs x-ray diffraction of photosystem ii, dark state
52c4fbyg_
not modelled 7.7 56
PDB header:photosynthesis
Chain: G: PDB Molecule:photosystem q(b) protein 1;
PDBTitle: fs x-ray diffraction of photosystem ii
53c3prqT_
not modelled 7.7 56
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer
54c3bz2T_
not modelled 7.7 56
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 2 of 2). this2 file contains second monomer of psii dimer
55c4tnkt_
not modelled 7.7 56
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
56c4tnit_
not modelled 7.7 56
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
57c3wzhA_
not modelled 6.6 10
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized protein af_1864;
PDBTitle: crystal structure of afcsx3
58d1paqa_
not modelled 6.5 18
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:MIF4G domain-like
59c1paqA_
not modelled 6.5 18
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor eif-2b epsilon
PDBTitle: crystal structure of the catalytic fragment of eukaryotic2 initiation factor 2b epsilon
60c2y5tG_
not modelled 6.2 50
PDB header:immune system
Chain: G: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
61c2f6aJ_
not modelled 6.2 43
PDB header:cell adhesion/structural protein
Chain: J: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
62c2vnuD_
not modelled 6.1 11
PDB header:hydrolase/rna
Chain: D: PDB Molecule:exosome complex exonuclease rrp44;
PDBTitle: crystal structure of sc rrp44
63c2y5tE_
not modelled 5.9 50
PDB header:immune system
Chain: E: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
64c6c7nD_
not modelled 5.9 18
PDB header:oxidoreductase
Chain: D: PDB Molecule:malic enzyme;
PDBTitle: monoclinic form of malic enzyme from sorghum at 2 angstroms resolution
65c2f6aG_
not modelled 5.8 43
PDB header:cell adhesion/structural protein
Chain: G: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
66c2f6aF_
not modelled 5.8 43
PDB header:cell adhesion/structural protein
Chain: F: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
67c2f6aH_
not modelled 5.8 43
PDB header:cell adhesion/structural protein
Chain: H: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
68c2f6aE_
not modelled 5.8 43
PDB header:cell adhesion/structural protein
Chain: E: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
69c2f6aI_
not modelled 5.8 43
PDB header:cell adhesion/structural protein
Chain: I: PDB Molecule:collagen;
PDBTitle: collagen adhesin and collagen complex structure
70c1vw45_
not modelled 5.7 10
PDB header:ribosome
Chain: 5: PDB Molecule:54s ribosomal protein l3, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
71c5xguB_
not modelled 5.7 22
PDB header:hydrolase
Chain: B: PDB Molecule:ribonuclease r;
PDBTitle: escherichia coli. rnase r
72c2aw5A_
not modelled 5.7 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadp-dependent malic enzyme;
PDBTitle: crystal structure of a human malic enzyme
73c3juiA_
not modelled 5.6 27
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor eif-2b subunit epsilon;
PDBTitle: crystal structure of the c-terminal domain of human translation2 initiation factor eif2b epsilon subunit
74d2vk9a1
not modelled 5.6 31
Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:Glycosylating toxin catalytic domain-like
75c3wjaA_
not modelled 5.4 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadp-dependent malic enzyme;
PDBTitle: the crystal structure of human cytosolic nadp(+)-dependent malic2 enzyme in apo form
76c1gz3B_
not modelled 5.2 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent malic enzyme, mitochondrial;
PDBTitle: molecular mechanism for the regulation of human mitochondrial nad(p)+-2 dependent malic enzyme by atp and fumarate
77c1qr6A_
not modelled 5.2 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:malic enzyme 2;
PDBTitle: human mitochondrial nad(p)-dependent malic enzyme
78c5tisT_
not modelled 5.1 63
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: room temperature xfel structure of the native, doubly-illuminated2 photosystem ii complex
79c5zznt_
not modelled 5.1 63
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of photosystem ii from an sqdg-deficient mutant of2 thermosynechococcus elongatus
80c3wu2T_
not modelled 5.1 63
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure analysis of photosystem ii complex
81c5kaiT_
not modelled 5.1 63
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: nh3-bound rt xfel structure of photosystem ii 500 ms after the 2nd2 illumination (2f) at 2.8 a resolution
82c5kafT_
not modelled 5.1 63
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii in the dark state at 3.0 a2 resolution
83c5tist_
not modelled 5.1 63
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: room temperature xfel structure of the native, doubly-illuminated2 photosystem ii complex
84c5kaft_
not modelled 5.1 63
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii in the dark state at 3.0 a2 resolution
85c5kait_
not modelled 5.1 63
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: nh3-bound rt xfel structure of photosystem ii 500 ms after the 2nd2 illumination (2f) at 2.8 a resolution
86c5ws6t_
not modelled 5.1 63
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native xfel structure of photosystem ii (preflash two-flash dataset
87c4ub6t_
not modelled 5.1 63
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native structure of photosystem ii (dataset-1) by a femtosecond x-ray2 laser
88c5gthT_
not modelled 5.1 63
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native xfel structure of photosystem ii (dark dataset)
89c4ub8T_
not modelled 5.1 63
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native structure of photosystem ii (dataset-2) by a femtosecond x-ray2 laser
90c5zznT_
not modelled 5.1 63
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of photosystem ii from an sqdg-deficient mutant of2 thermosynechococcus elongatus
91c4ub8t_
not modelled 5.1 63
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native structure of photosystem ii (dataset-2) by a femtosecond x-ray2 laser
92c4ub6T_
not modelled 5.1 63
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native structure of photosystem ii (dataset-1) by a femtosecond x-ray2 laser
93c5v2cT_
not modelled 5.1 63
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: re-refinement of crystal structure of photosystem ii complex
94c5ws6T_
not modelled 5.1 63
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native xfel structure of photosystem ii (preflash two-flash dataset
95c5h2ft_
not modelled 5.1 63
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of the psbm-deletion mutant of photosystem ii
96c4il6t_
not modelled 5.1 63
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: structure of sr-substituted photosystem ii
97c5gtiT_
not modelled 5.1 63
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native xfel structure of photosystem ii (two flash dataset)
98c5gtit_
not modelled 5.1 63
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native xfel structure of photosystem ii (two flash dataset)
99c5ws5T_
not modelled 5.1 63
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: native xfel structure of photosystem ii (preflash dark dataset)

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