Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3450c_(-)_3871263_3872675
DateFri Aug 9 18:20:12 BST 2019
Unique Job ID392df3a290c7bbb7
SequenceVPSPATTWLH ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:46.441 Y:62.281 Z:98.774
Model (left) based on template c4kk7A_
Top template information
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion system protein eccb1;
PDBTitle: structure of eccb1 from the type vii (esx-1) secretion system of2 mycobacterium tuberculosis.
Confidence and coverage
Confidence:100.0% Coverage: 79%
373 residues ( 79% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4kk7A_



100.0 30
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion system protein eccb1;
PDBTitle: structure of eccb1 from the type vii (esx-1) secretion system of2 mycobacterium tuberculosis.
2c5cyuA_



100.0 33
PDB header:membrane protein
Chain: A: PDB Molecule:conserved membrane protein;
PDBTitle: structure of the soluble domain of eccb1 from the mycobacterium2 smegmatis esx-1 secretion system.
3c6navI_



38.1 15
PDB header:structural protein
Chain: I: PDB Molecule:m9ud72;
PDBTitle: cryo-em reconstruction of sulfolobus islandicus lal14/1 pilus
4d2fb5a1



33.0 14
Fold:YojJ-like
Superfamily:YojJ-like
Family:YojJ-like
5d2i5nh1



30.5 11
Fold:PRC-barrel domain
Superfamily:PRC-barrel domain
Family:Photosynthetic reaction centre, H-chain, cytoplasmic domain
6c1k6nH_



29.4 13
PDB header:photosynthesis
Chain: H: PDB Molecule:photosynthetic reaction center h subunit;
PDBTitle: e(l212)a,d(l213)a double mutant structure of photosynthetic reaction2 center from rhodobacter sphaeroides
7c2i5nH_



24.3 11
PDB header:photosynthesis
Chain: H: PDB Molecule:reaction center protein h chain;
PDBTitle: 1.96 a x-ray structure of photosynthetic reaction center from2 rhodopseudomonas viridis:crystals grown by microfluidic technique
8c5xefA_



20.0 14
PDB header:chaperone
Chain: A: PDB Molecule:flagellar protein flis;
PDBTitle: crystal structure of flagellar chaperone from bacteria
9d1rzhh1



16.1 13
Fold:PRC-barrel domain
Superfamily:PRC-barrel domain
Family:Photosynthetic reaction centre, H-chain, cytoplasmic domain
10c2k9yB_



15.8 13
PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
11c2k9yA_



15.8 13
PDB header:transferase
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
12c1vh6A_



14.7 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:flagellar protein flis;
PDBTitle: crystal structure of a flagellar protein
13d1vh6a_



14.7 24
Fold:Four-helical up-and-down bundle
Superfamily:Flagellar export chaperone FliS
Family:Flagellar export chaperone FliS
14c3k1iA_



13.8 14
PDB header:chaperone
Chain: A: PDB Molecule:flagellar protein;
PDBTitle: crystal strcture of flis-hp1076 complex in h. pylori
15c2ciuA_



11.2 22
PDB header:protein transport
Chain: A: PDB Molecule:import inner membrane translocase subunit tim21
PDBTitle: structure of the ims domain of the mitochondrial import2 protein tim21 from s. cerevisiae
16c6f0kA_



11.1 14
PDB header:membrane protein
Chain: A: PDB Molecule:cytochrome c family protein;
PDBTitle: alternative complex iii
17c6cfwE_



9.4 35
PDB header:membrane protein
Chain: E: PDB Molecule:mbh subunit;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
18c2wmmA_



8.6 9
PDB header:cell cycle
Chain: A: PDB Molecule:chromosome partition protein mukb;
PDBTitle: crystal structure of the hinge domain of mukb
19c6ch3B_



8.3 32
PDB header:structural protein
Chain: B: PDB Molecule:flagellar secretion chaperone flis,flagellin;
PDBTitle: crystal structure of the cytoplasmic domain of flha and flis-flic2 complex
20d1y7ma1



7.3 11
Fold:L,D-transpeptidase catalytic domain-like
Superfamily:L,D-transpeptidase catalytic domain-like
Family:L,D-transpeptidase catalytic domain-like
21c2lf3A_



not modelled 6.5 56
PDB header:signaling protein
Chain: A: PDB Molecule:effector protein hopab3;
PDBTitle: solution nmr structure of hoppmal_281_385 from pseudomonas syringae2 pv. maculicola str. es4326, midwest center for structural genomics3 target apc40104.5 and northeast structural genomics consortium target4 pst2a
22c3c1zA_



not modelled 6.5 13
PDB header:dna binding protein
Chain: A: PDB Molecule:dna integrity scanning protein disa;
PDBTitle: structure of the ligand-free form of a bacterial dna damage sensor2 protein
23c2mhgA_



not modelled 6.2 33
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of protein np_254181.1 from pseudomonas aeruginosa pa01
24c3hshA_



not modelled 6.0 24
PDB header:protein binding
Chain: A: PDB Molecule:collagen alpha-1(xviii) chain;
PDBTitle: crystal structure of human collagen xviii trimerization domain2 (tetragonal crystal form)
25d2zjru1



not modelled 5.8 24
Fold:L28p-like
Superfamily:L28p-like
Family:Ribosomal protein L28
26c6gyyB_



not modelled 5.7 17
PDB header:transferase
Chain: B: PDB Molecule:diadenylate cyclase;
PDBTitle: crystal structure of daca from staphylococcus aureus, n166c/t172c2 double mutant

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below