Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3461c_(rpmJ)_3880465_3880578
DateFri Aug 9 18:20:13 BST 2019
Unique Job ID7580822bfa6a68ff
SequenceVKVNPSVKPI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.878 Y:23.002 Z:24.836
Model (left) based on template c1vw40_
Top template information
PDB header:ribosome
Chain: 0: PDB Molecule:54s ribosomal protein rtc6, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
Confidence and coverage
Confidence: 99.9% Coverage:100%
37 residues (100% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1vw40_



99.9 57
PDB header:ribosome
Chain: 0: PDB Molecule:54s ribosomal protein rtc6, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
2c5x8t5_



99.9 70
PDB header:ribosome
Chain: 5: PDB Molecule:50s ribosomal protein l36, chloroplastic;
PDBTitle: structure of the 50s large subunit of chloroplast ribosome from2 spinach
3c5h1sf_



99.9 70
PDB header:ribosome
Chain: F: PDB Molecule:50s ribosomal protein l3;
PDBTitle: structure of the large subunit of the chloro-ribosome
4d1dfea_



99.9 73
Fold:Ribosomal protein L36
Superfamily:Ribosomal protein L36
Family:Ribosomal protein L36
5c5mmi5_



99.9 70
PDB header:ribosome
Chain: 5: PDB Molecule:50s ribosomal protein l36, chloroplastic;
PDBTitle: structure of the large subunit of the chloroplast ribosome
6c3bbo6_



99.9 59
PDB header:ribosome
Chain: 6: PDB Molecule:ribosomal protein l36;
PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome
7c6hma4_



99.9 70
PDB header:ribosome
Chain: 4: PDB Molecule:50s ribosomal protein l36;
PDBTitle: improved model derived from cryo-em map of staphylococcus aureus large2 ribosomal subunit
8d2zjr41



99.9 65
Fold:Ribosomal protein L36
Superfamily:Ribosomal protein L36
Family:Ribosomal protein L36
9c5mlc6_



99.9 70
PDB header:ribosome
Chain: 6: PDB Molecule:50s ribosomal protein l36, chloroplastic;
PDBTitle: cryo-em structure of the spinach chloroplast ribosome reveals the2 location of plastid-specific ribosomal proteins and extensions
10c2qao4_



99.8 51
PDB header:ribosome
Chain: 4: PDB Molecule:50s ribosomal protein l36;
PDBTitle: crystal structure of the bacterial ribosome from escherichia coli in2 complex with neomycin. this file contains the 50s subunit of the3 second 70s ribosome, with neomycin bound. the entire crystal4 structure contains two 70s ribosomes and is described in remark 400.
11c2qbk4_



99.8 51
PDB header:ribosome
Chain: 4: PDB Molecule:50s ribosomal protein l36;
PDBTitle: crystal structure of the bacterial ribosome from escherichia coli in2 complex with gentamicin and ribosome recycling factor (rrf). this3 file contains the 50s subunit of the second 70s ribosome, with4 gentamicin and rrf bound. the entire crystal structure contains two5 70s ribosomes and is described in remark 400.
12c3j7y4_



99.8 49
PDB header:ribosome
Chain: 4: PDB Molecule:bl36;
PDBTitle: structure of the large ribosomal subunit from human mitochondria
13c4ce49_



99.8 43
PDB header:ribosome
Chain: 9: PDB Molecule:mrpl36;
PDBTitle: 39s large subunit of the porcine mitochondrial ribosome
14c5xs1A_



24.0 22
PDB header:hormone
Chain: A: PDB Molecule:hyperglycemic hormone-like peptide;
PDBTitle: solution structure of crustacean hyperglycemic hormone-like (chh-l)2 from the scylla olivacea
15c1j0tA_



20.6 24
PDB header:hormone/growth factor
Chain: A: PDB Molecule:molt-inhibiting hormone;
PDBTitle: the solution structure of molt-inhibiting hormone from the2 kuruma prawn
16d1j0ta_



20.6 24
Fold:Crustacean CHH/MIH/GIH neurohormone
Superfamily:Crustacean CHH/MIH/GIH neurohormone
Family:Crustacean CHH/MIH/GIH neurohormone
17c5b5iB_



20.5 28
PDB header:hormone
Chain: B: PDB Molecule:crustacean hyperglycemic hormones 1;
PDBTitle: the crystal structure of a crustacean hyperglycemic hormone precursor2 from the kuruma prawn
18c1cz6A_



8.3 26
PDB header:toxin
Chain: A: PDB Molecule:protein (androctonin);
PDBTitle: solution structure of androctonin
19d1rkia1



8.2 44
Fold:THUMP domain
Superfamily:THUMP domain-like
Family:PAE0736-like
20d2cs3a1



8.2 60
Fold:RING/U-box
Superfamily:RING/U-box
Family:Variant RING domain

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