Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3462c_(infA)_3880611_3880832
DateFri Aug 9 18:20:13 BST 2019
Unique Job ID4642ac4f795dc5f4
SequenceMAKKDGAIEV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:28.592 Y:34.993 Z:36.195
Model (left) based on template c6c00A_
Top template information
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-1;
PDBTitle: solution structure of translation initiation factor 1 from clostridium2 difficile
Confidence and coverage
Confidence:100.0% Coverage: 99%
72 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6c00A_



100.0 68
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-1;
PDBTitle: solution structure of translation initiation factor 1 from clostridium2 difficile
2c4ql5A_



100.0 68
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-1;
PDBTitle: crystal structure of translation initiation factor if-1 from2 streptococcus pneumoniae tigr4
3d1ah9a_



100.0 69
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
4c2nchA_



100.0 49
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-1;
PDBTitle: solution structure of translation initiation factor if1 from wolbachia2 endosymbiont strain trs of brugia malayi
5c3i4oA_



100.0 100
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-1;
PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis
6d1hr0w_



100.0 66
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
7d1jt8a_



99.9 23
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
8c4bpp0_



99.9 22
PDB header:ribosome
Chain: 0: PDB Molecule:translation initiation factor eif-1a family protein;
PDBTitle: the crystal structure of the eukaryotic 40s ribosomal subunit in2 complex with eif1 and eif1a - complex 4
9d1d7qa_



99.9 27
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
10c3j81i_



99.9 24
PDB header:ribosome
Chain: I: PDB Molecule:es8;
PDBTitle: cryoem structure of a partial yeast 48s preinitiation complex
11c2oqkA_



99.9 33
PDB header:translation
Chain: A: PDB Molecule:putative translation initiation factor eif-1a;
PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a
12c4mnoA_



99.8 33
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 1a;
PDBTitle: crystal structure of aif1a from pyrococcus abyssi
13c2dgyA_



99.7 21
PDB header:translation
Chain: A: PDB Molecule:mgc11102 protein;
PDBTitle: solution structure of the eukaryotic initiation factor 1a2 in mgc11102 protein
14d1u0la1



97.8 30
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
15d1t9ha1



97.4 20
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
16c1u0lB_



97.1 33
PDB header:hydrolase
Chain: B: PDB Molecule:probable gtpase engc;
PDBTitle: crystal structure of yjeq from thermotoga maritima
17c2yv5A_



96.9 24
PDB header:hydrolase
Chain: A: PDB Molecule:yjeq protein;
PDBTitle: crystal structure of yjeq from aquifex aeolicus
18c5uz4Z_



96.3 23
PDB header:ribosome/hydrolase
Chain: Z: PDB Molecule:small ribosomal subunit biogenesis gtpase rsga;
PDBTitle: the cryo-em structure of yjeq bound to the 30s subunit suggests a2 fidelity checkpoint function for this protein in ribosome assembly
19c6h4dA_



96.1 23
PDB header:rna binding protein
Chain: A: PDB Molecule:small ribosomal subunit biogenesis gtpase rsga;
PDBTitle: crystal structure of rsga from pseudomonas aeruginosa
20c2rcnA_



96.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:probable gtpase engc;
PDBTitle: crystal structure of the ribosomal interacting gtpase yjeq from the2 enterobacterial species salmonella typhimurium.
21c1t9hA_



not modelled 95.4 21
PDB header:hydrolase
Chain: A: PDB Molecule:probable gtpase engc;
PDBTitle: the crystal structure of yloq, a circularly permuted gtpase.
22c4a2iV_



not modelled 94.8 23
PDB header:ribosome/hydrolase
Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga;
PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor
23c4aimA_



not modelled 93.5 23
PDB header:transferase/peptide
Chain: A: PDB Molecule:polyribonucleotide nucleotidyltransferase;
PDBTitle: crystal structure of c. crescentus pnpase bound to rnase e2 recognition peptide
24c3fp9E_



not modelled 92.3 14
PDB header:hydrolase
Chain: E: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of intern domain of proteasome-associated2 atpase, mycobacterium tuberculosis
25c1q46A_



not modelled 90.3 19
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 alpha subunit;
PDBTitle: crystal structure of the eif2 alpha subunit from2 saccharomyces cerevisia
26c2k52A_



not modelled 89.7 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein mj1198;
PDBTitle: structure of uncharacterized protein mj1198 from2 methanocaldococcus jannaschii. northeast structural3 genomics target mjr117b
27d1kl9a2



not modelled 89.4 18
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
28c5zwzA_



not modelled 88.6 13
PDB header:gene regulation
Chain: A: PDB Molecule:agenet domain-containing protein;
PDBTitle: crystal structure of arabidopsis thaliana agdp1 agd34
29c6qh2A_



not modelled 88.5 25
PDB header:signaling protein
Chain: A: PDB Molecule:polyribonucleotide nucleotidyltransferase;
PDBTitle: solution nmr ensemble for a chimeric kh-s1 domain construct of2 exosomal polynucleotide phosphrylase at 298k compiled using the3 comand method
30c5xguB_



not modelled 88.4 17
PDB header:hydrolase
Chain: B: PDB Molecule:ribonuclease r;
PDBTitle: escherichia coli. rnase r
31c1zn1L_



not modelled 88.0 23
PDB header:biosynthetic/structural protein/rna
Chain: L: PDB Molecule:30s ribosomal protein s12;
PDBTitle: coordinates of rrf fitted into cryo-em map of the 70s post-termination2 complex
32c5zwxB_



not modelled 87.4 16
PDB header:gene regulation
Chain: B: PDB Molecule:duf724 domain-containing protein 6-like;
PDBTitle: crystal structure of raphanus sativus agdp1 agd12 in complex with an2 h3k9me2 peptide
33d2uubl1



not modelled 86.4 23
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
34c1xniI_



not modelled 86.2 14
PDB header:cell cycle
Chain: I: PDB Molecule:tumor suppressor p53-binding protein 1;
PDBTitle: tandem tudor domain of 53bp1
35d1y14b1



not modelled 84.7 21
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
36c3j20N_



not modelled 83.0 37
PDB header:ribosome
Chain: N: PDB Molecule:30s ribosomal protein s12p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
37c3m9bK_



not modelled 82.8 11
PDB header:chaperone
Chain: K: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
38c4nnkA_



not modelled 82.6 31
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: structural basis for targeting the ribosomal protein s1 of2 mycobacterium tuberculosis by pyrazinamide
39c3j6vL_



not modelled 82.4 23
PDB header:ribosome
Chain: L: PDB Molecule:28s ribosomal protein s12, mitochondrial;
PDBTitle: cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
40c2xzmL_



not modelled 82.3 27
PDB header:ribosome
Chain: L: PDB Molecule:40s ribosomal protein s12;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
41c1ssfA_



not modelled 81.2 14
PDB header:cell cycle
Chain: A: PDB Molecule:transformation related protein 53 binding
PDBTitle: solution structure of the mouse 53bp1 fragment (residues2 1463-1617)
42c2oceA_



not modelled 80.1 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pa5201;
PDBTitle: crystal structure of tex family protein pa5201 from2 pseudomonas aeruginosa
43c5x50G_



not modelled 79.5 14
PDB header:transferase
Chain: G: PDB Molecule:rna polymerase ii subunit;
PDBTitle: rna polymerase ii from komagataella pastoris (type-2 crystal)
44c3u5gX_



not modelled 79.4 30
PDB header:ribosome
Chain: X: PDB Molecule:40s ribosomal protein s23-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 40s subunit, ribosome b
45c2r7fA_



not modelled 79.3 17
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease ii family protein;
PDBTitle: crystal structure of ribonuclease ii family protein from deinococcus2 radiodurans, hexagonal crystal form. northeast structural genomics3 target drr63
46c1s1hL_



not modelled 79.0 30
PDB header:ribosome
Chain: L: PDB Molecule:40s ribosomal protein s23;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1h, contains 40s subunit. the 60s4 ribosomal subunit is in file 1s1i.
47d1i94l_



not modelled 78.9 23
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
48c5xyiX_



not modelled 78.1 33
PDB header:ribosome
Chain: X: PDB Molecule:40s ribosomal protein s23, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
49c3zeyS_



not modelled 78.0 30
PDB header:ribosome
Chain: S: PDB Molecule:40s ribosomal protein s23, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
50d2qall1



not modelled 77.8 23
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
51c4dapA_



not modelled 77.5 15
PDB header:dna binding protein
Chain: A: PDB Molecule:sugar fermentation stimulation protein a;
PDBTitle: the structure of escherichia coli sfsa
52c2k4kA_



not modelled 73.5 22
PDB header:rna binding protein
Chain: A: PDB Molecule:general stress protein 13;
PDBTitle: solution structure of gsp13 from bacillus subtilis
53c1kl9A_



not modelled 71.9 18
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 2 subunit 1;
PDBTitle: crystal structure of the n-terminal segment of human eukaryotic2 initiation factor 2alpha
54d1g2914



not modelled 71.8 14
Fold:OB-fold
Superfamily:MOP-like
Family:ABC-transporter additional domain
55d1go3e1



not modelled 71.6 26
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
56c1go3E_



not modelled 71.5 28
PDB header:transferase
Chain: E: PDB Molecule:dna-directed rna polymerase subunit e;
PDBTitle: structure of an archeal homolog of the eukaryotic rna polymerase ii2 rpb4/rpb7 complex
57c2pmzE_



not modelled 71.4 27
PDB header:translation, transferase
Chain: E: PDB Molecule:dna-directed rna polymerase subunit e;
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
58c2mflA_



not modelled 71.4 17
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: domain 2 of e. coli ribosomal protein s1
59c2c35F_



not modelled 70.9 16
PDB header:transferase
Chain: F: PDB Molecule:dna-directed rna polymerase ii 19 kda polypeptide;
PDBTitle: subunits rpb4 and rpb7 of human rna polymerase ii
60c5x8r8_



not modelled 69.0 31
PDB header:ribosome
Chain: 8: PDB Molecule:30s ribosomal protein s1, chloroplastic;
PDBTitle: structure of the 30s small subunit of chloroplast ribosome from2 spinach
61c2ix1A_



not modelled 67.8 13
PDB header:hydrolase
Chain: A: PDB Molecule:exoribonuclease 2;
PDBTitle: rnase ii d209n mutant
62d2g3ra1



not modelled 67.5 14
Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:Tudor domain
63c3go5A_



not modelled 66.4 11
PDB header:gene regulation
Chain: A: PDB Molecule:multidomain protein with s1 rna-binding domains;
PDBTitle: crystal structure of a multidomain protein with nucleic acid binding2 domains (sp_0946) from streptococcus pneumoniae tigr4 at 1.40 a3 resolution
64c1yz6A_



not modelled 66.4 24
PDB header:translation
Chain: A: PDB Molecule:probable translation initiation factor 2 alpha
PDBTitle: crystal structure of intact alpha subunit of aif2 from2 pyrococcus abyssi
65d2ahob2



not modelled 66.2 14
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
66c2khjA_



not modelled 66.1 19
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: nmr structure of the domain 6 of the e. coli ribosomal2 protein s1
67c2khiA_



not modelled 65.2 27
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: nmr structure of the domain 4 of the e. coli ribosomal2 protein s1
68c2b8kG_



not modelled 64.7 17
PDB header:transferase
Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kda polypeptide;
PDBTitle: 12-subunit rna polymerase ii
69d1q46a2



not modelled 64.5 19
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
70c2wp8J_



not modelled 63.6 17
PDB header:hydrolase
Chain: J: PDB Molecule:exosome complex exonuclease dis3;
PDBTitle: yeast rrp44 nuclease
71c2zkql_



not modelled 63.3 38
PDB header:ribosomal protein/rna
Chain: L: PDB Molecule:
PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
72c1h9mB_



not modelled 62.9 13
PDB header:binding protein
Chain: B: PDB Molecule:molybdenum-binding-protein;
PDBTitle: two crystal structures of the cytoplasmic molybdate-binding protein2 modg suggest a novel cooperative binding mechanism and provide3 insights into ligand-binding specificity. peg-grown form with4 molybdate bound
73d1guta_



not modelled 62.5 16
Fold:OB-fold
Superfamily:MOP-like
Family:Molybdate/tungstate binding protein MOP
74c2equA_



not modelled 61.6 10
PDB header:protein binding
Chain: A: PDB Molecule:phd finger protein 20-like 1;
PDBTitle: solution structure of the tudor domain of phd finger2 protein 20-like 1
75c1q8kA_



not modelled 59.4 19
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 2
PDBTitle: solution structure of alpha subunit of human eif2
76c5c0wJ_



not modelled 59.3 15
PDB header:hydrolase/rna
Chain: J: PDB Molecule:exosome complex exonuclease dis3;
PDBTitle: structure of a 12-subunit nuclear exosome complex bound to single-2 stranded rna substrates
77d1smxa_



not modelled 58.9 10
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
78c1nt9G_



not modelled 58.5 17
PDB header:transcription, transferase
Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kd polypeptide;
PDBTitle: complete 12-subunit rna polymerase ii
79d2z0sa1



not modelled 55.8 12
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
80c4xi7A_



not modelled 54.3 12
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase mib1;
PDBTitle: crystal structure of the mzm-rep domains of mind bomb 1 in complex2 with jagged1 n-box peptide
81c3p8dB_



not modelled 53.9 8
PDB header:protein binding
Chain: B: PDB Molecule:medulloblastoma antigen mu-mb-50.72;
PDBTitle: crystal structure of the second tudor domain of human phf20 (homodimer2 form)
82d1h9ma1



not modelled 53.8 20
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
83d1b12a_



not modelled 53.2 45
Fold:LexA/Signal peptidase
Superfamily:LexA/Signal peptidase
Family:Type 1 signal peptidase
84d1sroa_



not modelled 52.6 24
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
85c1h9sA_



not modelled 50.6 12
PDB header:transcription regulator
Chain: A: PDB Molecule:molybdenum transport protein mode;
PDBTitle: molybdate bound complex of dimop domain of mode from e.coli
86c5ohoB_



not modelled 50.3 24
PDB header:transcription
Chain: B: PDB Molecule:transcription elongation factor spt5;
PDBTitle: crystal structure of the kowx-kow4 domain of human dsif
87c4ytlB_



not modelled 50.0 20
PDB header:transcription
Chain: B: PDB Molecule:transcription elongation factor spt5;
PDBTitle: structure of the kow2-kow3 domain of transcription elongation factor2 spt5.
88c3psiA_



not modelled 49.7 8
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451)
89c5oikZ_



not modelled 49.2 23
PDB header:transcription
Chain: Z: PDB Molecule:transcription elongation factor spt5;
PDBTitle: structure of an rna polymerase ii-dsif transcription elongation2 complex
90c3qiiA_



not modelled 49.2 8
PDB header:transcription regulator
Chain: A: PDB Molecule:phd finger protein 20;
PDBTitle: crystal structure of tudor domain 2 of human phd finger protein 20
91c2wg6L_



not modelled 49.1 18
PDB header:transcription,hydrolase
Chain: L: PDB Molecule:general control protein gcn4, proteasome-activating
PDBTitle: proteasome-activating nucleotidase (pan) n-domain (57-134) from2 archaeoglobus fulgidus fused to gcn4, p61a mutant
92d2nn6g1



not modelled 47.6 13
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
93c2ahoB_



not modelled 47.5 14
PDB header:translation
Chain: B: PDB Molecule:translation initiation factor 2 alpha subunit;
PDBTitle: structure of the archaeal initiation factor eif2 alpha-gamma2 heterodimer from sulfolobus solfataricus complexed with gdpnp
94c4pmwB_



not modelled 46.9 26
PDB header:hydrolase/rna
Chain: B: PDB Molecule:dis3-like exonuclease 2;
PDBTitle: structure of mouse dis3l2 in complex with oligou rna substrate
95c4davA_



not modelled 46.8 11
PDB header:hydrolase/dna
Chain: A: PDB Molecule:sugar fermentation stimulation protein homolog;
PDBTitle: the structure of pyrococcus furiosus sfsa in complex with dna
96d1h9ma2



not modelled 46.3 11
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
97c2pqaB_



not modelled 45.8 19
PDB header:replication
Chain: B: PDB Molecule:replication protein a 14 kda subunit;
PDBTitle: crystal structure of full-length human rpa 14/32 heterodimer
98c4n31A_



not modelled 44.5 14
PDB header:cell adhesion
Chain: A: PDB Molecule:sipa;
PDBTitle: structure and activity of streptococcus pyogenes sipa: a signal2 peptidase homologue essential for pilus polymerisation
99c2l66B_



not modelled 43.6 35
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, abrb family;
PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea.
100c2ldmA_



not modelled 43.5 7
PDB header:transcription/protein binding
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of human phf20 tudor2 domain bound to a p53 segment2 containing a dimethyllysine analog p53k370me2
101c2mfiA_



not modelled 43.4 20
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: domain 1 of e. coli ribosomal protein s1
102c2qqsB_



not modelled 43.0 10
PDB header:oxidoreductase
Chain: B: PDB Molecule:jmjc domain-containing histone demethylation
PDBTitle: jmjd2a tandem tudor domains in complex with a trimethylated2 histone h4-k20 peptide
103c2eqsA_



not modelled 42.3 19
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dhx8;
PDBTitle: solution structure of the s1 rna binding domain of human2 atp-dependent rna helicase dhx8
104c5lm7A_



not modelled 41.4 21
PDB header:transcription
Chain: A: PDB Molecule:transcription termination/antitermination protein nusa;
PDBTitle: crystal structure of the lambda n-nus factor complex
105c4qmgD_



not modelled 40.0 23
PDB header:transcription
Chain: D: PDB Molecule:staphylococcal nuclease domain-containing protein 1;
PDBTitle: the structure of mtdh-snd1 complex reveals novel cancer-promoting2 interactions
106d1v43a2



not modelled 38.8 21
Fold:OB-fold
Superfamily:MOP-like
Family:ABC-transporter additional domain
107d2pi2e1



not modelled 38.5 19
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
108c6et9H_



not modelled 38.1 33
PDB header:transferase
Chain: H: PDB Molecule:pfam duf35;
PDBTitle: structure of the acetoacetyl-coa-thiolase/hmg-coa-synthase complex2 from methanothermococcus thermolithotrophicus at 2.75 a
109c4gopX_



not modelled 37.4 9
PDB header:dna binding protein/dna
Chain: X: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure and conformational change of a replication protein a2 heterotrimer bound to ssdna
110c2z0sA_



not modelled 37.4 9
PDB header:rna binding protein
Chain: A: PDB Molecule:probable exosome complex rna-binding protein 1;
PDBTitle: crystal structure of putative exosome complex rna-binding2 protein
111c4k8wA_



not modelled 37.0 14
PDB header:cell adhesion
Chain: A: PDB Molecule:lepa;
PDBTitle: an arm-swapped dimer of the s. pyogenes pilin specific assembly factor2 sipa
112c6d6rK_



not modelled 36.7 16
PDB header:hydrolase
Chain: K: PDB Molecule:exosome complex exonuclease rrp44;
PDBTitle: human nuclear exosome-mtr4 rna complex - composite map after focused2 reconstruction
113c2nn6G_



not modelled 36.5 11
PDB header:hydrolase/transferase
Chain: G: PDB Molecule:exosome complex exonuclease rrp40;
PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40
114c2ba0A_



not modelled 35.7 10
PDB header:rna binding protein
Chain: A: PDB Molecule:archaeal exosome rna binding protein rrp4;
PDBTitle: archaeal exosome core
115c2fhdA_



not modelled 34.9 14
PDB header:cell cycle
Chain: A: PDB Molecule:dna repair protein rhp9/crb2;
PDBTitle: crystal structure of crb2 tandem tudor domains
116d1h9ra1



not modelled 34.3 12
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
117d2gnra1



not modelled 33.7 21
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:SSO2064-like
118c2nn6I_



not modelled 32.3 15
PDB header:hydrolase/transferase
Chain: I: PDB Molecule:3'-5' exoribonuclease csl4 homolog;
PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40
119d1e32a1



not modelled 32.1 21
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Cdc48 N-terminal domain-like
120d3d31a1



not modelled 32.0 15
Fold:OB-fold
Superfamily:MOP-like
Family:ABC-transporter additional domain

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite