Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3479_(-)_3895999_3899064
DateFri Aug 9 18:20:15 BST 2019
Unique Job ID539b0444b476f5b2
SequenceMAGVTREINL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.487 Y:45.385 Z:64.372
Model (left) based on template c5fyaA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:patatin-like protein, plpd;
PDBTitle: cubic crystal of the native plpd
Confidence and coverage
Confidence: 99.7% Coverage: 18%
188 residues ( 18% of your sequence) have been modelled with 99.7% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
251 residues ( 25%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5fyaA_



99.7 22
PDB header:hydrolase
Chain: A: PDB Molecule:patatin-like protein, plpd;
PDBTitle: cubic crystal of the native plpd
2c4akfA_



99.7 29
PDB header:transferase
Chain: A: PDB Molecule:vipd;
PDBTitle: crystal structure of vipd from legionella pneumophila
3d1oxwa_



99.5 15
Fold:FabD/lysophospholipase-like
Superfamily:FabD/lysophospholipase-like
Family:Patatin
4c4qmkB_



99.5 28
PDB header:toxin
Chain: B: PDB Molecule:type iii secretion system effector protein exou;
PDBTitle: crystal structure of type iii effector protein exou (exou)
5c4akxB_



99.4 32
PDB header:transport protein
Chain: B: PDB Molecule:exou;
PDBTitle: structure of the heterodimeric complex exou-spcu from the type iii2 secretion system (t3ss) of pseudomonas aeruginosa
6c6aunB_



99.4 22
PDB header:hydrolase
Chain: B: PDB Molecule:pla2g6, ipla2beta;
PDBTitle: calcium-independent phospholipase a2 beta
7c3tu3B_



99.3 34
PDB header:toxin/toxin chaperone
Chain: B: PDB Molecule:exou;
PDBTitle: 1.92 angstrom resolution crystal structure of the full-length spcu in2 complex with full-length exou from the type iii secretion system of3 pseudomonas aeruginosa
8c1cjyB_



71.4 22
PDB header:hydrolase
Chain: B: PDB Molecule:protein (cytosolic phospholipase a2);
PDBTitle: human cytosolic phospholipase a2
9d1cjya2



64.2 30
Fold:FabD/lysophospholipase-like
Superfamily:FabD/lysophospholipase-like
Family:Lysophospholipase
10c4uzqA_



55.2 43
PDB header:hydrolase
Chain: A: PDB Molecule:protein notum homolog;
PDBTitle: structure of the wnt deacylase notum in complex with2 o-palmitoleoyl serine - crystal form ix - 1.5a
11c4uzjB_



54.0 50
PDB header:hydrolase
Chain: B: PDB Molecule:notum;
PDBTitle: structure of the wnt deacylase notum from drosophila -2 crystal form i - 2.4a
12d1hm6a_



53.5 19
Fold:Annexin
Superfamily:Annexin
Family:Annexin
13d2b5dx1



39.2 21
Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Families 57/38 glycoside transferase middle domain
Family:AmyC C-terminal domain-like
14c4o9pC_



29.7 13
PDB header:membrane protein
Chain: C: PDB Molecule:nad(p) transhydrogenase subunit alpha 2;
PDBTitle: crystal structure of thermus thermophilis transhydrogeanse domain ii2 dimer semet derivative
15c3chlA_



28.5 11
PDB header:metal binding protein
Chain: A: PDB Molecule:alpha-14 giardin;
PDBTitle: crystal structure of alpha-14 giardin with magnesium bound
16c2cfmA_



27.9 25
PDB header:ligase
Chain: A: PDB Molecule:thermostable dna ligase;
PDBTitle: atp-dependent dna ligase from pyrococcus furiosus
17d1axna_



27.9 14
Fold:Annexin
Superfamily:Annexin
Family:Annexin
18c3e4dD_



27.3 27
PDB header:hydrolase
Chain: D: PDB Molecule:esterase d;
PDBTitle: structural and kinetic study of an s-formylglutathione hydrolase from2 agrobacterium tumefaciens
19d1hvda_



26.5 18
Fold:Annexin
Superfamily:Annexin
Family:Annexin
20c5izrC_



25.8 9
PDB header:hydrolase/hydrolase inhibitor
Chain: C: PDB Molecule:cytosolic phospholipase a2 delta;
PDBTitle: human givd cytosolic phospholipase a2 in complex with methyl gamma-2 linolenyl fluorophosphonate inhibitor and terbium chloride
21c6a4tB_



not modelled 25.0 36
PDB header:hydrolase
Chain: B: PDB Molecule:peptidase e;
PDBTitle: crystal structure of peptidase e from deinococcus radiodurans r1
22d1fyea_



not modelled 24.0 36
Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Aspartyl dipeptidase PepE
23d1avca1



not modelled 23.8 21
Fold:Annexin
Superfamily:Annexin
Family:Annexin
24c3en0A_



not modelled 23.8 60
PDB header:hydrolase
Chain: A: PDB Molecule:cyanophycinase;
PDBTitle: the structure of cyanophycinase
25c3l4eA_



not modelled 22.2 40
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized peptidase lmo0363;
PDBTitle: 1.5a crystal structure of a putative peptidase e protein from listeria2 monocytogenes egd-e
26c5ip1A_



not modelled 21.4 33
PDB header:viral protein
Chain: A: PDB Molecule:nucleoprotein;
PDBTitle: tomato spotted wilt tospovirus nucleocapsid protein
27c6b3iB_



not modelled 21.0 14
PDB header:lipid binding protein
Chain: B: PDB Molecule:annexin;
PDBTitle: annexin a13a
28d2ie7a1



not modelled 19.4 18
Fold:Annexin
Superfamily:Annexin
Family:Annexin
29d1nu9c1



not modelled 19.2 23
Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Staphylocoagulase
Family:Staphylocoagulase
30c4b6gA_



not modelled 18.3 44
PDB header:hydrolase
Chain: A: PDB Molecule:putative esterase;
PDBTitle: the crystal structure of the neisserial esterase d.
31d1dqza_



not modelled 17.3 27
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Mycobacterial antigens
32d1whva_



not modelled 16.9 18
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
33d1r88a_



not modelled 16.2 34
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Mycobacterial antigens
34c7ceiB_



not modelled 15.8 29
PDB header:immune system
Chain: B: PDB Molecule:protein (colicin e7 immunity protein);
PDBTitle: the endonuclease domain of colicin e7 in complex with its inhibitor2 im7 protein
35d1aina_



not modelled 15.3 20
Fold:Annexin
Superfamily:Annexin
Family:Annexin
36d2nr5a1



not modelled 15.3 80
Fold:Ferritin-like
Superfamily:SO2669-like
Family:SO2669-like
37d2jb0b1



not modelled 15.1 29
Fold:His-Me finger endonucleases
Superfamily:His-Me finger endonucleases
Family:HNH-motif
38c5ix1A_



not modelled 14.6 15
PDB header:transcription
Chain: A: PDB Molecule:morc family cw-type zinc finger protein 3;
PDBTitle: crystal structure of mouse morc3 atpase-cw cassette in complex with2 amppnp and h3k4me3 peptide
39c3fcxA_



not modelled 14.5 31
PDB header:hydrolase
Chain: A: PDB Molecule:s-formylglutathione hydrolase;
PDBTitle: crystal structure of human esterase d
40c5m6qA_



not modelled 14.4 47
PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of kutzneria albida transglutaminase
41c4qkoH_



not modelled 14.4 29
PDB header:antimicrobial protein
Chain: H: PDB Molecule:pyocin-s2;
PDBTitle: the crystal structure of the pyocin s2 nuclease domain, immunity2 protein complex at 1.8 angstroms
42c1w3wA_



not modelled 14.3 16
PDB header:coagulation
Chain: A: PDB Molecule:annexin a8;
PDBTitle: the 2.1 angstroem resolution structure of annexin a8
43d1m9ia1



not modelled 13.6 14
Fold:Annexin
Superfamily:Annexin
Family:Annexin
44c4uhpA_



not modelled 13.3 24
PDB header:hydrolase
Chain: A: PDB Molecule:large component of pyocin ap41;
PDBTitle: crystal structure of the pyocin ap41 dnase-immunity complex
45d1xu9a_



not modelled 13.0 33
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
46c3bjrA_



not modelled 12.9 35
PDB header:hydrolase
Chain: A: PDB Molecule:putative carboxylesterase;
PDBTitle: crystal structure of a putative carboxylesterase (lp_1002) from2 lactobacillus plantarum wcfs1 at 2.09 a resolution
47d1i4aa_



not modelled 12.5 16
Fold:Annexin
Superfamily:Annexin
Family:Annexin
48d1alaa_



not modelled 12.3 19
Fold:Annexin
Superfamily:Annexin
Family:Annexin
49c4as2D_



not modelled 11.6 12
PDB header:hydrolase
Chain: D: PDB Molecule:phosphorylcholine phosphatase;
PDBTitle: pseudomonas aeruginosa phosphorylcholine phosphatase. monoclinic form
50c3sftA_



not modelled 11.6 31
PDB header:hydrolase
Chain: A: PDB Molecule:chemotaxis response regulator protein-glutamate
PDBTitle: crystal structure of thermotoga maritima cheb methylesterase catalytic2 domain
51d1m9ia2



not modelled 11.4 19
Fold:Annexin
Superfamily:Annexin
Family:Annexin
52d1ufaa1



not modelled 11.0 13
Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Families 57/38 glycoside transferase middle domain
Family:AmyC C-terminal domain-like
53d1vkna2



not modelled 10.8 43
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
54d1w7ba_



not modelled 10.4 20
Fold:Annexin
Superfamily:Annexin
Family:Annexin
55c5ohcB_



not modelled 10.3 21
PDB header:hydrolase
Chain: B: PDB Molecule:hydrolase;
PDBTitle: crystal structure of mycolicibacterium hassiacum glucosylglycerate2 hydrolase (mhggh) in complex with glycerol
56d2gykb1



not modelled 10.0 29
Fold:His-Me finger endonucleases
Superfamily:His-Me finger endonucleases
Family:HNH-motif
57c5if3B_



not modelled 9.9 33
PDB header:oxidoreductase
Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr;
PDBTitle: crystal structure of a short-chain dehydrogenase/reductase sdr from2 burkholderia vietnamiensis
58c2hivA_



not modelled 9.8 29
PDB header:ligase
Chain: A: PDB Molecule:thermostable dna ligase;
PDBTitle: atp-dependent dna ligase from s. solfataricus
59d1b93a_



not modelled 9.8 13
Fold:Methylglyoxal synthase-like
Superfamily:Methylglyoxal synthase-like
Family:Methylglyoxal synthase, MgsA
60c3ctrA_



not modelled 9.5 18
PDB header:hydrolase
Chain: A: PDB Molecule:poly(a)-specific ribonuclease parn;
PDBTitle: crystal structure of the rrm-domain of the poly(a)-specific2 ribonuclease parn bound to m7gtp
61c6c4vA_



not modelled 9.5 60
PDB header:transport protein
Chain: A: PDB Molecule:polyketide synthase pks13;
PDBTitle: 1.9 angstrom resolution crystal structure of acyl carrier protein2 domain (residues 1350-1461) of polyketide synthase pks13 from3 mycobacterium tuberculosis
62c3gdeA_



not modelled 9.5 20
PDB header:ligase
Chain: A: PDB Molecule:dna ligase;
PDBTitle: the closed conformation of atp-dependent dna ligase from archaeoglobus2 fulgidus
63d1dk5a_



not modelled 9.4 20
Fold:Annexin
Superfamily:Annexin
Family:Annexin
64c4jmqA_



not modelled 9.3 33
PDB header:viral protein
Chain: A: PDB Molecule:bacteriophage t5 distal tail protein;
PDBTitle: crystal structure of pb9: the dit of bacteriophage t5.
65d1jvna1



not modelled 9.3 20
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Histidine biosynthesis enzymes
66d2g17a2



not modelled 9.3 25
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:GAPDH-like
67d1chda_



not modelled 8.9 46
Fold:Methylesterase CheB, C-terminal domain
Superfamily:Methylesterase CheB, C-terminal domain
Family:Methylesterase CheB, C-terminal domain
68d1avca2



not modelled 8.9 20
Fold:Annexin
Superfamily:Annexin
Family:Annexin
69c6gcsg_



not modelled 8.6 38
PDB header:oxidoreductase
Chain: G: PDB Molecule:30-kda protein (nugm);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
70c5ew5C_



not modelled 8.6 29
PDB header:hydrolase
Chain: C: PDB Molecule:colicin-e9;
PDBTitle: crystal structure of colicin e9 in complex with its immunity protein2 im9
71c1avcA_



not modelled 8.4 21
PDB header:calcium/phospholipid-binding protein
Chain: A: PDB Molecule:annexin vi;
PDBTitle: bovine annexin vi (calcium-bound)
72d1b63a1



not modelled 8.4 13
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:DNA gyrase/MutL, second domain
73c6pheA_



not modelled 8.3 20
PDB header:lyase
Chain: A: PDB Molecule:methylglyoxal synthase;
PDBTitle: crystal structure of methylglyoxal synthase from elizabethkingia2 anophelis nuhp1
74d1dm5a_



not modelled 8.3 18
Fold:Annexin
Superfamily:Annexin
Family:Annexin
75d1vqo21



not modelled 8.2 71
Fold:Non-globular all-alpha subunits of globular proteins
Superfamily:Ribosomal protein L39e
Family:Ribosomal protein L39e
76c5n6yC_



not modelled 8.1 30
PDB header:oxidoreductase
Chain: C: PDB Molecule:nitrogenase vanadium-iron protein delta chain;
PDBTitle: azotobacter vinelandii vanadium nitrogenase
77d1sbya1



not modelled 7.9 28
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
78c4bmvH_



not modelled 7.8 33
PDB header:oxidoreductase
Chain: H: PDB Molecule:short-chain dehydrogenase;
PDBTitle: short-chain dehydrogenase from sphingobium yanoikuyae in2 complex with nadph
79c6cl5F_



not modelled 7.8 38
PDB header:viral protein
Chain: F: PDB Molecule:tail fiber protein;
PDBTitle: structure of p. aeruginosa r1 pyocin fiber pales_06171 comprising c-2 terminal residues 323-701
80c4h18D_



not modelled 7.7 19
PDB header:transferase
Chain: D: PDB Molecule:cmt1;
PDBTitle: three dimensional structure of corynomycoloyl tranferase c
81d1n00a_



not modelled 7.5 17
Fold:Annexin
Superfamily:Annexin
Family:Annexin
82c1yx5A_



not modelled 7.5 31
PDB header:hydrolase
Chain: A: PDB Molecule:26s proteasome non-atpase regulatory subunit 4;
PDBTitle: solution structure of s5a uim-1/ubiquitin complex
83c2lzqA_



not modelled 7.4 38
PDB header:viral protein
Chain: A: PDB Molecule:ns2 peptide;
PDBTitle: structure of ns2(32-57) gbvb protein
84c4zqrD_



not modelled 7.4 13
PDB header:oxidoreductase
Chain: D: PDB Molecule:inosine-5'-monophosphate dehydrogenase,inosine-5'-
PDBTitle: crystal structure of the catalytic domain of the inosine monophosphate2 dehydrogenase from mycobacterium tuberculosis
85d1o5ia_



not modelled 7.4 22
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
86c1nm3B_



not modelled 7.4 50
PDB header:electron transport
Chain: B: PDB Molecule:protein hi0572;
PDBTitle: crystal structure of heamophilus influenza hybrid-prx5
87d1e44b_



not modelled 7.3 24
Fold:Ribonuclease domain of colicin E3
Superfamily:Ribonuclease domain of colicin E3
Family:Ribonuclease domain of colicin E3
88c3bxpA_



not modelled 7.3 24
PDB header:hydrolase
Chain: A: PDB Molecule:putative lipase/esterase;
PDBTitle: crystal structure of a putative carboxylesterase (lp_2923) from2 lactobacillus plantarum wcfs1 at 1.70 a resolution
89d1y6xa1



not modelled 7.3 13
Fold:all-alpha NTP pyrophosphatases
Superfamily:all-alpha NTP pyrophosphatases
Family:HisE-like (PRA-PH)
90c4mdvB_



not modelled 7.2 13
PDB header:metal binding protein
Chain: B: PDB Molecule:annexin;
PDBTitle: crystal structure of calcium-bound annexin (sm)1
91c3tjrA_



not modelled 7.2 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:short chain dehydrogenase;
PDBTitle: crystal structure of a rv0851c ortholog short chain dehydrogenase from2 mycobacterium paratuberculosis
92d1x9na1



not modelled 7.1 23
Fold:ATP-dependent DNA ligase DNA-binding domain
Superfamily:ATP-dependent DNA ligase DNA-binding domain
Family:ATP-dependent DNA ligase DNA-binding domain
93c3h7aC_



not modelled 7.0 22
PDB header:oxidoreductase
Chain: C: PDB Molecule:short chain dehydrogenase;
PDBTitle: crystal structure of short-chain dehydrogenase from rhodopseudomonas2 palustris
94c5mrwL_



not modelled 6.9 60
PDB header:hydrolase
Chain: L: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
95c5mrwD_



not modelled 6.9 60
PDB header:hydrolase
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
96c6hraD_



not modelled 6.9 60
PDB header:membrane protein
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: cryo-em structure of the kdpfabc complex in an e1 outward-facing state2 (state 1)
97c5mrwH_



not modelled 6.9 60
PDB header:hydrolase
Chain: H: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
98c6hrbD_



not modelled 6.9 60
PDB header:membrane protein
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: cryo-em structure of the kdpfabc complex in an e2 inward-facing state2 (state 2)
99d1mcxa_



not modelled 6.8 19
Fold:Annexin
Superfamily:Annexin
Family:Annexin

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below