Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3489_(-)_3908251_3908415
DateFri Aug 9 18:20:16 BST 2019
Unique Job ID0548cfb6093357e4
SequenceMSTKSDHGEI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:34.166 Y:16.174 Z:21.500
Model (left) based on template c3frwF_
Top template information
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:putative trp repressor protein;
PDBTitle: crystal structure of putative trpr protein from ruminococcus obeum
Confidence and coverage
Confidence: 14.1% Coverage: 24%
13 residues ( 24% of your sequence) have been modelled with 14.1% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3frwF_



14.1 23
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:putative trp repressor protein;
PDBTitle: crystal structure of putative trpr protein from ruminococcus obeum
2c6c3rB_



11.1 86
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
3c6ghrF_



9.7 75
PDB header:photosynthesis
Chain: F: PDB Molecule:cp12 polypeptide;
PDBTitle: cyanobacterial gapdh with full-length cp12
4c5ghaF_



9.7 45
PDB header:transferase/transport protein
Chain: F: PDB Molecule:sulfur carrier ttub;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
5d1bvsa2



9.5 50
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
6c3zdfD_



9.1 75
PDB header:oxidoreductase
Chain: D: PDB Molecule:cp12 polypeptide;
PDBTitle: structure of gapdh with cp12 peptide from thermosynechococcus2 elongatus
7c3korD_



9.1 31
PDB header:transcription
Chain: D: PDB Molecule:possible trp repressor;
PDBTitle: crystal structure of a putative trp repressor from staphylococcus2 aureus
8d1wj9a2



9.0 33
Fold:Ferredoxin-like
Superfamily:CRISPR-associated protein
Family:CRISPR-associated protein
9c6ghlE_



8.9 75
PDB header:photosynthesis
Chain: E: PDB Molecule:cp12 polypeptide;
PDBTitle: cyanobacterial gapdh with full-length cp12
10c3zdfC_



8.9 75
PDB header:oxidoreductase
Chain: C: PDB Molecule:cp12 polypeptide;
PDBTitle: structure of gapdh with cp12 peptide from thermosynechococcus2 elongatus
11c3nufB_



7.2 17
PDB header:transcription regulator
Chain: B: PDB Molecule:prd-containing transcription regulator;
PDBTitle: crystal structure of a prd-containing transcription regulator2 (lsei_2718) from lactobacillus casei atcc 334 at 1.38 a resolution
12d2zjrd1



7.1 31
Fold:RL5-like
Superfamily:RL5-like
Family:Ribosomal protein L5
13d1iq4a_



7.1 44
Fold:RL5-like
Superfamily:RL5-like
Family:Ribosomal protein L5
14d2hjja1



6.7 43
Fold:dsRBD-like
Superfamily:YcfA/nrd intein domain
Family:YkfF-like
15c2hjjA_



6.7 43
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ykff;
PDBTitle: solution nmr structure of protein ykff from escherichia coli.2 northeast structural genomics target er397.
16d1mjia_



6.1 38
Fold:RL5-like
Superfamily:RL5-like
Family:Ribosomal protein L5
17c5u0aA_



6.0 39
PDB header:immune system
Chain: A: PDB Molecule:crispr-associated protein, cse3 family;
PDBTitle: crispr rna-guided surveillance complex
18c2eqfA_



5.9 50
PDB header:hydrolase
Chain: A: PDB Molecule:tumor necrosis factor, alpha-induced protein 3;
PDBTitle: solution structure of the 7th a20-type zinc finger domain2 from human tumor necrosis factor, alpha-induced protein3
19c5o60F_



5.6 38
PDB header:ribosome
Chain: F: PDB Molecule:50s ribosomal protein l5;
PDBTitle: structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis
20c4itqA_



5.5 21
PDB header:gene regulation, structural protein/dna
Chain: A: PDB Molecule:putative uncharacterized protein sco1480;
PDBTitle: crystal structure of hypothetical protein sco1480 bound to dna
21c2lj9A_



not modelled 5.4 50
PDB header:protein binding
Chain: A: PDB Molecule:cp12 domain-containing protein 2;
PDBTitle: partial 3d structure of the c-terminal part of the free arabidopsis2 thaliana cp12-2 in its oxidized form
22d1d8ba_



not modelled 5.2 8
Fold:SAM domain-like
Superfamily:HRDC-like
Family:HRDC domain from helicases

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