Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3495c_(lprN)_3913559_3914713
DateFri Aug 9 18:20:17 BST 2019
Unique Job IDa5db7062a2c67dad
SequenceMNRIWLRAII ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:43.916 Y:42.159 Z:66.257
Model (left) based on template c6ic4C_
Top template information
PDB header:protein transport
Chain: C: PDB Molecule:toluene tolerance efflux transporter (abc superfamily,
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
Confidence and coverage
Confidence: 99.9% Coverage: 35%
133 residues ( 35% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
283 residues ( 74%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ic4C_



99.9 23
PDB header:protein transport
Chain: C: PDB Molecule:toluene tolerance efflux transporter (abc superfamily,
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
2c5uw8C_



99.8 22
PDB header:transport protein
Chain: C: PDB Molecule:probable phospholipid abc transporter-binding protein mlad;
PDBTitle: structure of e. coli mce protein mlad, core mce domain
3c5uvnE_



99.5 19
PDB header:transport protein
Chain: E: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
4c5uvnC_



99.5 19
PDB header:transport protein
Chain: C: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
5c5uvnA_



99.5 19
PDB header:transport protein
Chain: A: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
6c5uvnF_



99.5 19
PDB header:transport protein
Chain: F: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
7c5uvnB_



99.5 19
PDB header:transport protein
Chain: B: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
8c5uvnD_



99.5 19
PDB header:transport protein
Chain: D: PDB Molecule:paraquat-inducible protein b;
PDBTitle: structure of e. coli mce protein pqib, periplasmic domain
9c1qu7A_



91.5 12
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i;
PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor
10c2qf4A_



88.1 14
PDB header:structural protein
Chain: A: PDB Molecule:cell shape determining protein mrec;
PDBTitle: high resolution structure of the major periplasmic domain from the2 cell shape-determining filament mrec (orthorhombic form)
11c2wpqA_



86.4 6
PDB header:membrane protein
Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment;
PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (sadak3, in-2 register fusion)
12d1eq1a_



85.4 15
Fold:Apolipophorin-III
Superfamily:Apolipophorin-III
Family:Apolipophorin-III
13c3zx6A_



85.3 11
PDB header:signaling
Chain: A: PDB Molecule:hamp, methyl-accepting chemotaxis protein i;
PDBTitle: structure of hamp(af1503)-tsr fusion - hamp (a291v) mutant
14c3lnrA_



84.6 11
PDB header:signaling protein
Chain: A: PDB Molecule:aerotaxis transducer aer2;
PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2
15c2ch7A_



83.7 9
PDB header:chemotaxis
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima
16c5u0pU_



81.3 9
PDB header:transcription
Chain: U: PDB Molecule:mediator complex subunit 21;
PDBTitle: cryo-em structure of the transcriptional mediator
17c6gajA_



77.5 17
PDB header:viral protein
Chain: A: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t1l reovirus sigma1 coiled coil tail (iodide)
18c6b7nC_



76.4 12
PDB header:viral protein
Chain: C: PDB Molecule:spike protein;
PDBTitle: cryo-electron microscopy structure of porcine delta coronavirus spike2 protein in the pre-fusion state
19c5zuvB_



71.4 12
PDB header:viral protein, inhibitor
Chain: B: PDB Molecule:spike glycoprotein,spike glycoprotein,inhibitor ek1;
PDBTitle: crystal structure of the human coronavirus 229e hr1 motif in complex2 with pan-covs inhibitor ek1
20d1ykhb1



69.9 8
Fold:Mediator hinge subcomplex-like
Superfamily:Mediator hinge subcomplex-like
Family:CSE2-like
21c3g67A_



not modelled 67.4 9
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
22c4tkoB_



not modelled 66.9 20
PDB header:membrane protein
Chain: B: PDB Molecule:emra;
PDBTitle: structure of the periplasmic adaptor protein emra
23c6nzkB_



not modelled 66.2 18
PDB header:viral protein
Chain: B: PDB Molecule:spike surface glycoprotein;
PDBTitle: structural basis for human coronavirus attachment to sialic acid2 receptors
24c1deqO_



not modelled 66.1 14
PDB header:blood clotting
Chain: O: PDB Molecule:fibrinogen (beta chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
25c2qihA_



not modelled 65.3 11
PDB header:cell adhesion
Chain: A: PDB Molecule:protein uspa1;
PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from moraxella2 catarrhalis
26c4rh7A_



not modelled 64.0 9
PDB header:motor protein
Chain: A: PDB Molecule:green fluorescent protein/cytoplasmic dynein 2 heavy chain
PDBTitle: crystal structure of human cytoplasmic dynein 2 motor domain in2 complex with adp.vi
27c4abxB_



not modelled 63.3 8
PDB header:dna binding protein
Chain: B: PDB Molecule:dna repair protein recn;
PDBTitle: crystal structure of deinococcus radiodurans recn coiled-2 coil domain
28c3vkhA_



not modelled 62.4 11
PDB header:motor protein
Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of a functional full-length dynein motor domain
29c6nb3B_



not modelled 62.1 22
PDB header:virus
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: mers-cov complex with human neutralizing lca60 antibody fab fragment2 (state 1)
30c3cwgA_



not modelled 61.6 9
PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment
31c6gapB_



not modelled 59.5 9
PDB header:viral protein
Chain: B: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t3d reovirus sigma1 coiled coil tail and body
32c1deqF_



not modelled 58.7 7
PDB header:blood clotting
Chain: F: PDB Molecule:fibrinogen (gamma chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
33c6cs2A_



not modelled 57.5 11
PDB header:viral protein/hydrolase
Chain: A: PDB Molecule:spike glycoprotein,fibritin;
PDBTitle: sars spike glycoprotein - human ace2 complex, stabilized variant, all2 ace2-bound particles
34c3jclC_



not modelled 56.0 15
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: cryo-electron microscopy structure of a coronavirus spike glycoprotein2 trimer
35c2j5uB_



not modelled 52.4 11
PDB header:cell shape regulation
Chain: B: PDB Molecule:mrec protein;
PDBTitle: mrec lysteria monocytogenes
36c5x5bB_



not modelled 52.1 11
PDB header:viral protein
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: prefusion structure of sars-cov spike glycoprotein, conformation 2
37c1cz5A_



not modelled 52.0 13
PDB header:hydrolase
Chain: A: PDB Molecule:vcp-like atpase;
PDBTitle: nmr structure of vat-n: the n-terminal domain of vat (vcp-2 like atpase of thermoplasma)
38c5xlrC_



not modelled 50.2 11
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: structure of sars-cov spike glycoprotein
39c5cwsJ_



not modelled 50.0 7
PDB header:protein transport
Chain: J: PDB Molecule:nucleoporin nup49;
PDBTitle: crystal structure of the intact chaetomium thermophilum nsp1-nup49-2 nup57 channel nucleoporin heterotrimer bound to its nic96 nuclear3 pore complex attachment site
40d1st6a4



not modelled 49.2 7
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
41c5wrgB_



not modelled 48.0 13
PDB header:virus like particle
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: sars-cov spike glycoprotein
42c4njlA_



not modelled 47.9 12
PDB header:viral protein
Chain: A: PDB Molecule:s protein;
PDBTitle: crystal structure of middle east respiratory syndrome coronavirus s22 protein fusion core
43c1bf5A_



not modelled 43.3 6
PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription 1-
PDBTitle: tyrosine phosphorylated stat-1/dna complex
44c1ei3E_



not modelled 42.8 7
PDB header:blood clotting
Chain: E: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
45c2vs0B_



not modelled 41.8 5
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
46c4lwsB_



not modelled 41.2 13
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
47c3ojaB_



not modelled 41.1 14
PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
48c5i08A_



not modelled 40.6 14
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, envelope glycoprotein chimera;
PDBTitle: prefusion structure of a human coronavirus spike protein
49c3zbhC_



not modelled 39.8 10
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
50c4iogD_



not modelled 39.8 11
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
51c2d4yA_



not modelled 38.5 9
PDB header:structural protein
Chain: A: PDB Molecule:flagellar hook-associated protein 1;
PDBTitle: crystal structure of a 49k fragment of hap1 (flgk)
52c2pjhB_



not modelled 37.0 10
PDB header:transport protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: strctural model of the p97 n domain- npl4 ubd complex
53c5zhyA_



not modelled 35.1 13
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, spike glycoprotein;
PDBTitle: structural characterization of the hcov-229e fusion core
54c2bezC_



not modelled 34.3 13
PDB header:viral protein
Chain: C: PDB Molecule:e2 glycoprotein;
PDBTitle: structure of a proteolitically resistant core from the severe acute2 respiratory syndrome coronavirus s2 fusion protein
55c3ghgI_



not modelled 33.8 9
PDB header:blood clotting
Chain: I: PDB Molecule:fibrinogen gamma chain;
PDBTitle: crystal structure of human fibrinogen
56c4lwsA_



not modelled 33.7 10
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
57c4ut1A_



not modelled 32.9 9
PDB header:motor protein
Chain: A: PDB Molecule:flagellar hook-associated protein;
PDBTitle: the structure of the flagellar hook junction protein flgk2 from burkholderia pseudomallei
58c5j0hA_



not modelled 32.4 17
PDB header:de novo protein
Chain: A: PDB Molecule:design construct 2l6hc3_13;
PDBTitle: de novo design of protein homo-oligomers with modular hydrogen bond2 network-mediated specificity
59c6e6aB_



not modelled 31.5 11
PDB header:protein binding
Chain: B: PDB Molecule:inclusion membrane protein a;
PDBTitle: triclinic crystal form of inca g144a point mutant
60c3ghgK_



not modelled 30.8 14
PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
61c5xbjA_



not modelled 29.7 7
PDB header:biosynthetic protein
Chain: A: PDB Molecule:flagellar hook-associated protein flgk;
PDBTitle: the structure of the flagellar hook junction protein hap1 (flgk) from2 campylobacter jejuni
62c5lskD_



not modelled 29.7 9
PDB header:cell cycle
Chain: D: PDB Molecule:kinetochore-associated protein dsn1 homolog;
PDBTitle: crystal structure of the human kinetochore mis12-cenp-c complex
63d1st6a3



not modelled 28.9 10
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
64c1kmiZ_



not modelled 27.5 7
PDB header:signaling protein
Chain: Z: PDB Molecule:chemotaxis protein chez;
PDBTitle: crystal structure of an e.coli chemotaxis protein, chez
65c5cwsC_



not modelled 27.5 13
PDB header:protein transport
Chain: C: PDB Molecule:nucleoporin nsp1;
PDBTitle: crystal structure of the intact chaetomium thermophilum nsp1-nup49-2 nup57 channel nucleoporin heterotrimer bound to its nic96 nuclear3 pore complex attachment site
66d2vzsa2



not modelled 27.1 13
Fold:Immunoglobulin-like beta-sandwich
Superfamily:beta-Galactosidase/glucuronidase domain
Family:beta-Galactosidase/glucuronidase domain
67d1wa8a1



not modelled 27.0 13
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
68c1wyyB_



not modelled 26.5 12
PDB header:viral protein
Chain: B: PDB Molecule:e2 glycoprotein;
PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein
69c4wsrA_



not modelled 25.9 15
PDB header:viral protein
Chain: A: PDB Molecule:hemagglutinin;
PDBTitle: the crystal structure of hemagglutinin form a/chicken/new york/14677-2 13/1998
70c1ei3C_



not modelled 25.8 6
PDB header:blood clotting
Chain: C: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
71c2kbbA_



not modelled 25.6 11
PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: nmr structure of the talin rod domain, 1655-1822
72d1v5va1



not modelled 25.1 15
Fold:Elongation factor/aminomethyltransferase common domain
Superfamily:Aminomethyltransferase beta-barrel domain
Family:Aminomethyltransferase beta-barrel domain
73c6gaoC_



not modelled 25.0 12
PDB header:viral protein
Chain: C: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t1l reovirus sigma1 coiled coil tail and body
74c4modB_



not modelled 24.8 21
PDB header:viral protein
Chain: B: PDB Molecule:hr1 of s protein, linker, hr2 of s protein;
PDBTitle: structure of the mers-cov fusion core
75c5szsC_



not modelled 24.2 13
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: glycan shield and epitope masking of a coronavirus spike protein2 observed by cryo-electron microscopy
76c5j65A_



not modelled 24.1 14
PDB header:toxin
Chain: A: PDB Molecule:pesticidal crystal protein cry6aa;
PDBTitle: crystal structure of trypsin activated cry6aa
77c5j9qH_



not modelled 23.6 6
PDB header:transferase
Chain: H: PDB Molecule:chromatin modification-related protein yng2;
PDBTitle: crystal structure of the nua4 core complex
78c2ieqC_



not modelled 23.4 15
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein
79c3pltB_



not modelled 23.2 11
PDB header:structural protein
Chain: B: PDB Molecule:sphingolipid long chain base-responsive protein lsp1;
PDBTitle: crystal structure of lsp1 from saccharomyces cerevisiae
80c5zkgB_



not modelled 22.5 17
PDB header:ligase
Chain: B: PDB Molecule:aminoacyl-trna synthetase-interacting multifunctional
PDBTitle: crystal structure of c-terminal domain of plasmodium vivax p43
81c6ezvX_



not modelled 21.5 9
PDB header:toxin
Chain: X: PDB Molecule:non-hemolytic enterotoxin lytic component l1;
PDBTitle: the cytotoxin maka from vibrio cholerae
82c2q13A_



not modelled 19.3 5
PDB header:protein transport
Chain: A: PDB Molecule:dcc-interacting protein 13 alpha;
PDBTitle: crystal structure of bar-ph domain of appl1
83c5n9yB_



not modelled 18.6 13
PDB header:membrane protein
Chain: B: PDB Molecule:zinc transport protein zntb;
PDBTitle: the full-length structure of zntb
84c4n21E_



not modelled 18.2 7
PDB header:viral protein
Chain: E: PDB Molecule:gp2 ectodomain;
PDBTitle: crystal structure of the gp2 core domain from the california academy2 of science virus
85c6grjG_



not modelled 18.1 17
PDB header:toxin
Chain: G: PDB Molecule:ahlb;
PDBTitle: structure of the ahlb pore of the tripartite alpha-pore forming toxin,2 ahl, from aeromonas hydrophila.
86c6ewyA_



not modelled 17.6 9
PDB header:structural protein
Chain: A: PDB Molecule:peptidoglycan endopeptidase ripa;
PDBTitle: ripa peptidoglycan hydrolase (rv1477, mycobacterium tuberculosis) n-2 terminal domain
87c3gvmA_



not modelled 17.5 11
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
88d1h9ra2



not modelled 17.0 24
Fold:OB-fold
Superfamily:MOP-like
Family:BiMOP, duplicated molybdate-binding domain
89d1x9la_



not modelled 15.8 11
Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:DR1885-like metal-binding protein
Family:DR1885-like metal-binding protein
90c5nmoA_



not modelled 15.6 14
PDB header:cell cycle
Chain: A: PDB Molecule:chromosome partition protein smc,chromosome partition
PDBTitle: structure of the bacillus subtilis smc joint domain
91c5mg8B_



not modelled 15.6 12
PDB header:recombination
Chain: B: PDB Molecule:structural maintenance of chromosomes protein 6;
PDBTitle: crystal structure of the s.pombe smc5/6 hinge domain
92d2cbia1



not modelled 15.3 14
Fold:Hyaluronidase domain-like
Superfamily:Hyaluronidase post-catalytic domain-like
Family:Hyaluronidase post-catalytic domain-like
93c3j99M_



not modelled 15.2 9
PDB header:hydrolase
Chain: M: PDB Molecule:synaptosomal-associated protein 25;
PDBTitle: structure of 20s supercomplex determined by single particle2 cryoelectron microscopy (state iiib)
94c5e7pA_



not modelled 14.8 13
PDB header:hydrolase
Chain: A: PDB Molecule:cell division control protein cdc48;
PDBTitle: crystal structure of msmeg_0858 (uniprot a0qqs4), a aaa atpase.
95c5gasN_



not modelled 14.7 13
PDB header:hydrolase
Chain: N: PDB Molecule:archaeal/vacuolar-type h+-atpase subunit i;
PDBTitle: thermus thermophilus v/a-atpase, conformation 2
96d1fl0a_



not modelled 14.6 11
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Myf domain
97c5j2lB_



not modelled 14.2 14
PDB header:de novo protein
Chain: B: PDB Molecule:protein design 2l4hc2_11;
PDBTitle: de novo design of protein homo-oligomers with modular hydrogen bond2 network-mediated specificity
98d2cp6a1



not modelled 14.0 22
Fold:SH3-like barrel
Superfamily:Cap-Gly domain
Family:Cap-Gly domain
99c1t5eB_



not modelled 14.0 14
PDB header:transport protein
Chain: B: PDB Molecule:multidrug resistance protein mexa;
PDBTitle: the structure of mexa

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below