Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3507_(PE_PGRS53)_3926748_3930893
DateFri Aug 9 18:20:18 BST 2019
Unique Job IDcaab75955f65a044
SequenceMSFVLVSPET ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:55.338 Y:50.523 Z:3015.725
Model (left) based on template c1ygvA_
Top template information
PDB header:structural protein/contractile protein
Chain: A: PDB Molecule:collagen i alpha 1;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment
Confidence and coverage
Confidence:100.0% Coverage: 67%
926 residues ( 67% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
1352 residues ( 98%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 95% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1ygvA_



100.0 26
PDB header:structural protein/contractile protein
Chain: A: PDB Molecule:collagen i alpha 1;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment
2c1y0fB_



99.9 27
PDB header:structural protein/contractile protein
Chain: B: PDB Molecule:collagen i alpha 2;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule
3c2qubG_



99.8 17
PDB header:hydrolase
Chain: G: PDB Molecule:extracellular lipase;
PDBTitle: crystal structure of extracellular lipase lipa from serratia2 marcescens
4c3hqvB_



99.8 25
PDB header:structural protein, contractile protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain;
PDBTitle: low resolution, molecular envelope structure of type i2 collagen in situ determined by fiber diffraction. single3 type i collagen molecule, rigid body refinement
5c2zj6A_



99.8 23
PDB header:hydrolase
Chain: A: PDB Molecule:lipase;
PDBTitle: crystal structure of d337a mutant of pseudomonas sp. mis38 lipase
6d2g38a1



99.8 36
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
7c2g38A_



99.8 36
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
8c5xfsA_



99.8 46
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
9c1k7qA_



99.7 16
PDB header:hydrolase
Chain: A: PDB Molecule:secreted protease c;
PDBTitle: prtc from erwinia chrysanthemi: e189a mutant
10c2ml3A_



99.5 15
PDB header:isomerase
Chain: A: PDB Molecule:poly(beta-d-mannuronate) c5 epimerase 6;
PDBTitle: solution structure of alge6r3 subunit from the azotobacter vinelandii2 mannuronan c5-epimerase
11c1satA_



99.5 20
PDB header:hydrolase (serine protease)
Chain: A: PDB Molecule:serratia protease;
PDBTitle: crystal structure of the 50 kda metallo protease from s.2 marcescens
12d1sata1



99.5 16
Fold:Single-stranded right-handed beta-helix
Superfamily:beta-Roll
Family:Serralysin-like metalloprotease, C-terminal domain
13d1g9ka1



99.3 21
Fold:Single-stranded right-handed beta-helix
Superfamily:beta-Roll
Family:Serralysin-like metalloprotease, C-terminal domain
14d1kapp1



99.3 29
Fold:Single-stranded right-handed beta-helix
Superfamily:beta-Roll
Family:Serralysin-like metalloprotease, C-terminal domain
15c2agmA_



99.2 18
PDB header:isomerase
Chain: A: PDB Molecule:poly(beta-d-mannuronate) c5 epimerase 4;
PDBTitle: solution structure of the r-module from alge4
16c1om8A_



99.1 21
PDB header:hydrolase
Chain: A: PDB Molecule:serralysin;
PDBTitle: crystal structure of a cold adapted alkaline protease from pseudomonas2 tac ii 18, co-crystallyzed with 10 mm edta
17c3p4gD_



99.1 17
PDB header:antifreeze protein
Chain: D: PDB Molecule:antifreeze protein;
PDBTitle: x-ray crystal structure of a hyperactive, ca2+-dependent, beta-helical2 antifreeze protein from an antarctic bacterium
18d1k7ia1



98.9 18
Fold:Single-stranded right-handed beta-helix
Superfamily:beta-Roll
Family:Serralysin-like metalloprotease, C-terminal domain
19c1jiwP_



98.8 21
PDB header:hydrolase/hyrolase inhibitor
Chain: P: PDB Molecule:alkaline metalloproteinase;
PDBTitle: crystal structure of the apr-aprin complex
20c2ml2A_



98.7 24
PDB header:isomerase
Chain: A: PDB Molecule:poly(beta-d-mannuronate) c5 epimerase 6;
PDBTitle: solution structure of alge6r2 subunit from the azotobacter vinelandii2 mannuronan c5-epimerase
21c4q1qA_



not modelled 98.6 22
PDB header:cell adhesion
Chain: A: PDB Molecule:adhesin/invasin tiba autotransporter;
PDBTitle: crystal structure of tibc-catalyzed hyper-glycosylated tiba55-3502 fragment
22c5cxlA_



not modelled 98.1 26
PDB header:toxin
Chain: A: PDB Molecule:bifunctional hemolysin/adenylate cyclase;
PDBTitle: crystal structure of rtx domain block v of adenylate cyclase toxin2 from bordetella pertussis
23c3bogB_



not modelled 98.0 37
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
24c3bogA_



not modelled 98.0 37
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
25c2pneA_



not modelled 97.6 39
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: crystal structure of the snow flea antifreeze protein
26c3boiB_



not modelled 97.6 39
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
27c3boiA_



not modelled 97.6 39
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
28c1nayC_



not modelled 95.8 21
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: gpp-foldon:x-ray structure
29c5juhA_



not modelled 94.8 22
PDB header:cell adhesion
Chain: A: PDB Molecule:antifreeze protein;
PDBTitle: crystal structure of c-terminal domain (rv) of mpafp
30c5ctdB_



not modelled 94.5 30
PDB header:structural protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain,collagen alpha-2(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
31c5ctdA_



not modelled 94.5 31
PDB header:structural protein
Chain: A: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-1(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
32c5ctiC_



not modelled 94.4 38
PDB header:structural protein
Chain: C: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-3(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen (native form)
33c2mu3A_



not modelled 89.7 22
PDB header:structural protein
Chain: A: PDB Molecule:aciniform spidroin 1;
PDBTitle: spider wrapping silk fibre architecture arising from its modular2 soluble protein precursor
34c2klwA_



not modelled 83.2 33
PDB header:de novo protein
Chain: A: PDB Molecule:(pkg)10;
PDBTitle: solution structure of an abc collagen heterotrimer reveals a2 single-register helix stabilized by electrostatic3 interactions
35c3a19D_



not modelled 34.7 40
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
36c2cuoC_



not modelled 22.3 37
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
37c2cuoF_



not modelled 22.3 37
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
38c2d3hC_



not modelled 20.6 39
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
39c3a19A_



not modelled 20.6 39
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
40c1k6fC_



not modelled 19.7 34
PDB header:structural protein
Chain: C: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
41c1k6fB_



not modelled 19.7 34
PDB header:structural protein
Chain: B: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
42c1k6fD_



not modelled 19.7 34
PDB header:structural protein
Chain: D: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
43c1k6fF_



not modelled 19.7 34
PDB header:structural protein
Chain: F: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
44c1k6fE_



not modelled 19.7 34
PDB header:structural protein
Chain: E: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
45c1k6fA_



not modelled 19.7 34
PDB header:structural protein
Chain: A: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
46c3a0mF_



not modelled 18.7 35
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
47c3ah9F_



not modelled 17.1 33
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
48c3a19B_



not modelled 16.7 41
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
49c2d3hB_



not modelled 16.7 41
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
50c2d3hA_



not modelled 16.7 41
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
51c3a19C_



not modelled 16.3 38
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
52c3a19E_



not modelled 16.3 38
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
53c3a08D_



not modelled 16.2 38
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
54c3a19F_



not modelled 16.2 38
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
55c2d3hD_



not modelled 16.2 38
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
56c3ah9D_



not modelled 16.1 36
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
57c2d3hE_



not modelled 16.0 39
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
58c3ah9A_



not modelled 15.0 33
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
59c3ah9C_



not modelled 12.1 35
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
60c3ah9E_



not modelled 12.1 35
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
61c3ah9B_



not modelled 12.1 35
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
62c2cuoE_



not modelled 10.4 35
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
63c2cuoB_



not modelled 10.4 35
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
64c2cuoA_



not modelled 10.4 35
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
65c2cuoD_



not modelled 10.4 35
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
66c2d3fE_



not modelled 8.7 42
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
67c1x1kA_



not modelled 8.7 42
PDB header:structural protein
Chain: A: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
68c1x1kD_



not modelled 8.7 42
PDB header:structural protein
Chain: D: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
69c2d3fF_



not modelled 8.7 42
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
70c1x1kB_



not modelled 8.7 42
PDB header:structural protein
Chain: B: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
71c1x1kC_



not modelled 8.7 42
PDB header:structural protein
Chain: C: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
72c2d3fD_



not modelled 8.7 42
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
73c3abnA_



not modelled 8.6 40
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-asp-gly-(pro-pro-gly)4 at 1.022 a
74c3admC_



not modelled 8.5 40
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
75c3admA_



not modelled 8.5 40
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
76c3admF_



not modelled 8.5 40
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
77c3admB_



not modelled 8.5 40
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
78c3admE_



not modelled 8.5 40
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
79c3a08C_



not modelled 8.2 38
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
80c2lyiA_



not modelled 8.0 21
PDB header:structural protein
Chain: A: PDB Molecule:protein (entity);
PDBTitle: repetitive domain (rp) of aciniform spidroin 1 from nephila2 antipodiana
81c3a08F_



not modelled 7.4 36
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
82c2d3hF_



not modelled 7.2 35
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
83c3a08E_



not modelled 7.0 36
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
84c3a08B_



not modelled 6.9 38
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
85c3a08A_



not modelled 6.9 38
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
86c3a0mC_



not modelled 6.5 40
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
87c6gwxA_



not modelled 5.9 32
PDB header:structural protein
Chain: A: PDB Molecule:optimised ppa-tyr;
PDBTitle: stabilising and understanding a miniprotein by rational design.
88c6bjcT_



not modelled 5.5 50
PDB header:cell cycle
Chain: T: PDB Molecule:targeting protein for xklp2;
PDBTitle: tpx2_mini decorated gmpcpp-microtubule
89c6bjcP_



not modelled 5.5 50
PDB header:cell cycle
Chain: P: PDB Molecule:targeting protein for xklp2;
PDBTitle: tpx2_mini decorated gmpcpp-microtubule
90c3a1hA_



not modelled 5.5 45
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure analysis of the collagen-like peptide, (ppg)4-otg-2 (ppg)4
91c3a0aA_



not modelled 5.5 45
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-opg-(ppg)4, monoclinic, twinned crystal
92c3a0mE_



not modelled 5.2 39
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
93c1x1kF_



not modelled 5.1 33
PDB header:structural protein
Chain: F: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4

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