Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3526_(-)_3962618_3963778
DateFri Aug 9 18:20:20 BST 2019
Unique Job ID6ea3a1d5878e5277
SequenceVSTDTSGVGV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:67.507 Y:68.860 Z:62.844
Model (left) based on template c2zylA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:possible oxidoreductase;
PDBTitle: crystal structure of 3-ketosteroid-9-alpha-hydroxylase2 (ksha) from m. tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 93%
359 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2zylA_



100.0 100
PDB header:oxidoreductase
Chain: A: PDB Molecule:possible oxidoreductase;
PDBTitle: crystal structure of 3-ketosteroid-9-alpha-hydroxylase2 (ksha) from m. tuberculosis
2c4qdfA_



100.0 62
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: A: PDB Molecule:3-ketosteroid 9alpha-hydroxylase oxygenase;
PDBTitle: crystal structure of apo ksha5 and ksha1 in complex with 1,4-30q-coa2 from r. rhodochrous
3c4qdfB_



100.0 61
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: B: PDB Molecule:3-ketosteroid 9alpha-hydroxylase oxygenase;
PDBTitle: crystal structure of apo ksha5 and ksha1 in complex with 1,4-30q-coa2 from r. rhodochrous
4c3gteB_



100.0 17
PDB header:electron transport, oxidoreductase
Chain: B: PDB Molecule:ddmc;
PDBTitle: crystal structure of dicamba monooxygenase with non-heme iron
5c3gkqB_



100.0 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:terminal oxygenase component of carbazole 1,9a-dioxygenase;
PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from novosphingobium2 sp. ka1
6c3vcaA_



100.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:ring-hydroxylating dioxygenase;
PDBTitle: quaternary ammonium oxidative demethylation: x-ray crystallographic,2 resonance raman and uv-visible spectroscopic analysis of a rieske-3 type demethylase
7c2de7B_



100.0 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:terminal oxygenase component of carbazole;
PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase
8c3n0qA_



100.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative aromatic-ring hydroxylating dioxygenase;
PDBTitle: crystal structure of a putative aromatic-ring hydroxylating2 dioxygenase (tm1040_3219) from silicibacter sp. tm1040 at 1.80 a3 resolution
9c3gcfC_



100.0 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:terminal oxygenase component of carbazole 1,9a-
PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from2 nocardioides aromaticivorans ic177
10c1z01D_



100.0 15
PDB header:oxidoreductase
Chain: D: PDB Molecule:2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase
PDBTitle: 2-oxoquinoline 8-monooxygenase component: active site modulation by2 rieske-[2fe-2s] center oxidation/reduction
11c1uljA_



100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:biphenyl dioxygenase large subunit;
PDBTitle: biphenyl dioxygenase (bpha1a2) in complex with the substrate
12c1wqlA_



100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:iron-sulfur protein large subunit of cumene dioxygenase;
PDBTitle: cumene dioxygenase (cuma1a2) from pseudomonas fluorescens ip01
13c2b1xE_



100.0 15
PDB header:oxidoreductase
Chain: E: PDB Molecule:naphthalene dioxygenase large subunit;
PDBTitle: crystal structure of naphthalene 1,2-dioxygenase from rhodococcus sp.
14c2hmnA_



100.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:naphthalene 1,2-dioxygenase alpha subunit;
PDBTitle: crystal structure of the naphthalene 1,2-dioxygenase f352v2 mutant bound to anthracene.
15c2gbxE_



100.0 16
PDB header:oxidoreductase
Chain: E: PDB Molecule:biphenyl 2,3-dioxygenase alpha subunit;
PDBTitle: crystal structure of biphenyl 2,3-dioxygenase from sphingomonas2 yanoikuyae b1 bound to biphenyl
16d1wqla1



100.0 23
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
17d1ulia1



100.0 18
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
18d1z01a1



100.0 17
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
19d2b1xa1



100.0 19
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
20d2de6a1



100.0 18
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
21d1o7na1



not modelled 100.0 21
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
22d2bmoa1



not modelled 100.0 20
Fold:ISP domain
Superfamily:ISP domain
Family:Ring hydroxylating alpha subunit ISP domain
23c3d89A_



not modelled 99.9 20
PDB header:electron transport
Chain: A: PDB Molecule:rieske domain-containing protein;
PDBTitle: crystal structure of a soluble rieske ferredoxin from mus musculus
24c2de7E_



not modelled 99.9 24
PDB header:oxidoreductase
Chain: E: PDB Molecule:ferredoxin component of carbazole;
PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase
25c3dqyA_



not modelled 99.9 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:toluene 1,2-dioxygenase system ferredoxin
PDBTitle: crystal structure of toluene 2,3-dioxygenase ferredoxin
26d1fqta_



not modelled 99.9 23
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
27c4aivA_



not modelled 99.9 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable nitrite reductase [nad(p)h] small subunit nird;
PDBTitle: crystal structure of putative nadh-dependent nitrite reductase small2 subunit from mycobacterium tuberculosis
28d1vm9a_



not modelled 99.9 21
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
29d2jzaa1



not modelled 99.9 19
Fold:ISP domain
Superfamily:ISP domain
Family:NirD-like
30d3c0da1



not modelled 99.9 14
Fold:ISP domain
Superfamily:ISP domain
Family:NirD-like
31c3gceA_



not modelled 99.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferredoxin component of carbazole 1,9a-
PDBTitle: ferredoxin of carbazole 1,9a-dioxygenase from nocardioides2 aromaticivorans ic177
32d2jo6a1



not modelled 99.8 16
Fold:ISP domain
Superfamily:ISP domain
Family:NirD-like
33c2i7fB_



not modelled 99.8 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:ferredoxin component of dioxygenase;
PDBTitle: sphingomonas yanoikuyae b1 ferredoxin
34c2qpzA_



not modelled 99.8 24
PDB header:metal binding protein
Chain: A: PDB Molecule:naphthalene 1,2-dioxygenase system ferredoxin
PDBTitle: naphthalene 1,2-dioxygenase rieske ferredoxin
35c5cxmC_



not modelled 99.8 18
PDB header:metal binding protein
Chain: C: PDB Molecule:cytochrome b6/f complex iron-sulfur subunit;
PDBTitle: crystal structure of the cyanobacterial plasma membrane rieske protein2 petc3 from synechocystis pcc 6803
36d1rfsa_



not modelled 99.6 16
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
37d1q90c_



not modelled 99.6 17
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
38d3cx5e1



not modelled 99.6 20
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
39c4aayH_



not modelled 99.5 22
PDB header:oxidoreductase
Chain: H: PDB Molecule:arob;
PDBTitle: crystal structure of the arsenite oxidase protein complex2 from rhizobium species strain nt-26
40d1g8kb_



not modelled 99.5 19
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
41d1riea_



not modelled 99.5 26
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
42d2e74d1



not modelled 99.4 15
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
43c2nvgA_



not modelled 99.3 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: soluble domain of rieske iron sulfur protein.
44d1nyka_



not modelled 99.2 24
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
45c2e76D_



not modelled 99.1 15
PDB header:photosynthesis
Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit;
PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus
46c2fyuE_



not modelled 98.9 21
PDB header:oxidoreductase
Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit,
PDBTitle: crystal structure of bovine heart mitochondrial bc1 with jg1442 inhibitor
47c2fynO_



not modelled 98.9 22
PDB header:oxidoreductase
Chain: O: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur
PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex
48c1p84E_



not modelled 98.8 17
PDB header:oxidoreductase
Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: hdbt inhibited yeast cytochrome bc1 complex
49d1z01a2



not modelled 98.7 11
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
50d2b1xa2



not modelled 98.5 11
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
51d2bmoa2



not modelled 98.4 16
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
52d1wqla2



not modelled 98.3 14
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
53d1ulia2



not modelled 98.3 16
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
54d1o7na2



not modelled 98.2 17
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
55c6hwhB_



not modelled 97.9 23
PDB header:electron transport
Chain: B: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
56d1jm1a_



not modelled 97.7 29
Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
57d2de6a2



not modelled 97.5 18
Fold:TBP-like
Superfamily:Bet v1-like
Family:Ring hydroxylating alpha subunit catalytic domain
58c6fo2R_



not modelled 96.4 22
PDB header:membrane protein
Chain: R: PDB Molecule:cytochrome b-c1 complex subunit rieske, mitochondrial;
PDBTitle: cryoem structure of bovine cytochrome bc1 with no ligand bound
59c5xyiI_



not modelled 64.1 19
PDB header:ribosome
Chain: I: PDB Molecule:40s ribosomal protein s8;
PDBTitle: small subunit of trichomonas vaginalis ribosome
60c2ba1B_



not modelled 50.2 17
PDB header:rna binding protein
Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4;
PDBTitle: archaeal exosome core
61c5xxuI_



not modelled 39.4 18
PDB header:ribosome
Chain: I: PDB Molecule:ribosomal protein es8;
PDBTitle: small subunit of toxoplasma gondii ribosome
62c6oawA_



not modelled 37.8 20
PDB header:immune system
Chain: A: PDB Molecule:wyl1;
PDBTitle: crystal structure of a crispr cas-related protein
63c1dvaX_



not modelled 36.3 83
PDB header:hydrolase/hydrolase inhibitor
Chain: X: PDB Molecule:peptide e-76;
PDBTitle: crystal structure of the complex between the peptide exosite inhibitor2 e-76 and coagulation factor viia
64c1dvaY_



not modelled 36.3 83
PDB header:hydrolase/hydrolase inhibitor
Chain: Y: PDB Molecule:peptide e-76;
PDBTitle: crystal structure of the complex between the peptide exosite inhibitor2 e-76 and coagulation factor viia
65c3ky7A_



not modelled 33.7 16
PDB header:transferase
Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase;
PDBTitle: 2.35 angstrom resolution crystal structure of a putative trna2 (guanine-7-)-methyltransferase (trmd) from staphylococcus aureus3 subsp. aureus mrsa252
66c3j3aI_



not modelled 30.5 24
PDB header:ribosome
Chain: I: PDB Molecule:40s ribosomal protein s8;
PDBTitle: structure of the human 40s ribosomal proteins
67c2z0rA_



not modelled 29.5 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein ttha0547;
PDBTitle: crystal structure of hypothetical protein ttha0547
68d1p9pa_



not modelled 26.3 17
Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:tRNA(m1G37)-methyltransferase TrmD
69c3k2tA_



not modelled 25.5 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lmo2511 protein;
PDBTitle: crystal structure of lmo2511 protein from listeria2 monocytogenes, northeast structural genomics consortium3 target lkr84a
70c2kppA_



not modelled 25.0 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin0431 protein;
PDBTitle: solution nmr structure of lin0431 protein from listeria innocua.2 northeast structural genomics consortium target lkr112
71c2xzn2_



not modelled 24.7 21
PDB header:ribosome
Chain: 2: PDB Molecule:40s ribosomal protein s8;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
72c5x2dA_



not modelled 23.4 11
PDB header:cell adhesion
Chain: A: PDB Molecule:tegumental protein 20.8 kda;
PDBTitle: crystal structure of dlc like domain of cstal3 (83-177aa)
73d1w44a_



not modelled 22.7 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
74c3j20R_



not modelled 22.6 60
PDB header:ribosome
Chain: R: PDB Molecule:30s ribosomal protein s17p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
75c3j38I_



not modelled 22.0 24
PDB header:ribosome
Chain: I: PDB Molecule:40s ribosomal protein s8;
PDBTitle: structure of the d. melanogaster 40s ribosomal proteins
76c1ph4A_



not modelled 21.8 18
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:telomere-binding protein alpha subunit;
PDBTitle: crystal structure of the oxytricha nova telomere end-binding protein2 complexed with noncognate ssdna ggggttttggcg
77c1jb7A_



not modelled 21.8 18
PDB header:dna-binding protein/dna
Chain: A: PDB Molecule:telomere-binding protein alpha subunit;
PDBTitle: dna g-quartets in a 1.86 a resolution structure of an oxytricha nova2 telomeric protein-dna complex
78c4b6aR_



not modelled 21.7 8
PDB header:ribosome
Chain: R: PDB Molecule:60s ribosomal protein l19-b;
PDBTitle: cryo-em structure of the 60s ribosomal subunit in complex2 with arx1 and rei1
79c4ifdI_



not modelled 21.0 16
PDB header:hydrolase/rna
Chain: I: PDB Molecule:exosome complex component csl4;
PDBTitle: crystal structure of an 11-subunit eukaryotic exosome complex bound to2 rna
80c3izbP_



not modelled 20.5 60
PDB header:ribosome
Chain: P: PDB Molecule:40s ribosomal protein rps11 (s17p);
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
81c2w3nA_



not modelled 20.2 13
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase 2;
PDBTitle: structure and inhibition of the co2-sensing carbonic anhydrase can22 from the pathogenic fungus cryptococcus neoformans
82c3iz6P_



not modelled 20.1 60
PDB header:ribosome
Chain: P: PDB Molecule:40s ribosomal protein s11 (s17p);
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
83d2ivxa2



not modelled 19.7 20
Fold:Cyclin-like
Superfamily:Cyclin-like
Family:Cyclin
84c4nooA_



not modelled 19.6 17
PDB header:immune system
Chain: A: PDB Molecule:vgrg protein;
PDBTitle: molecular mechanism for self-protection against type vi secretion2 system in vibrio cholerae
85c6bo0A_



not modelled 18.8 0
PDB header:oxidoreductase
Chain: A: PDB Molecule:mdba protein;
PDBTitle: mdba protein, a thiol-disulfide oxidoreductase from corynebacterium2 matruchotii
86c6gcsM_



not modelled 18.7 25
PDB header:oxidoreductase
Chain: M: PDB Molecule:numm subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
87c3j3aL_



not modelled 18.3 60
PDB header:ribosome
Chain: L: PDB Molecule:40s ribosomal protein s11;
PDBTitle: structure of the human 40s ribosomal proteins
88c3u5gL_



not modelled 18.1 60
PDB header:ribosome
Chain: L: PDB Molecule:40s ribosomal protein s11-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 40s subunit, ribosome b
89c3b99B_



not modelled 18.0 28
PDB header:isomerase
Chain: B: PDB Molecule:prostaglandin i2 synthase;
PDBTitle: crystal structure of zebrafish prostacyclin synthase (cytochrome p4502 8a1) in complex with substrate analog u51605
90c1dfcB_



not modelled 17.8 13
PDB header:structural protein
Chain: B: PDB Molecule:fascin;
PDBTitle: crystal structure of human fascin, an actin-crosslinking protein
91c3zeyE_



not modelled 17.5 60
PDB header:ribosome
Chain: E: PDB Molecule:40s ribosomal proteins s11, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
92c2c3yA_



not modelled 17.5 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase;
PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus
93c5xyiL_



not modelled 17.4 60
PDB header:ribosome
Chain: L: PDB Molecule:uncharacterized protein;
PDBTitle: small subunit of trichomonas vaginalis ribosome
94c3zf7T_



not modelled 17.4 8
PDB header:ribosome
Chain: T: PDB Molecule:60s ribosomal protein l19, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
95c2xznQ_



not modelled 17.3 60
PDB header:ribosome
Chain: Q: PDB Molecule:ribosomal protein s17 containing protein;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
96c4aboI_



not modelled 16.3 11
PDB header:structural protein
Chain: I: PDB Molecule:microtubule integrity protein mal3;
PDBTitle: mal3 ch domain homology model and mammalian tubulin (2xrp) docked into2 the 8.6-angstrom cryo-em map of mal3-gtpgammas-microtubules
97c3j39R_



not modelled 15.9 9
PDB header:ribosome
Chain: R: PDB Molecule:60s ribosomal protein l19;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
98d2c42a2



not modelled 15.8 27
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:PFOR PP module
99c6b4iD_



not modelled 15.4 19
PDB header:transport protein
Chain: D: PDB Molecule:nucleoporin like 2;
PDBTitle: crystal structure of human gle1 ctd-nup42 gbm-ddx19b(adp) complex

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Transmembrane helix prediction 

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