Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3587c_(-)_4029147_4029941
DateFri Aug 9 18:20:27 BST 2019
Unique Job ID21b04aaa4a69fdea
SequenceVLDLEPRGPL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.353 Y:44.738 Z:39.481
Model (left) based on template c3isyA_
Top template information
PDB header:protein binding
Chain: A: PDB Molecule:intracellular proteinase inhibitor;
PDBTitle: crystal structure of an intracellular proteinase inhibitor (ipi,2 bsu11130) from bacillus subtilis at 2.61 a resolution
Confidence and coverage
Confidence: 98.5% Coverage: 38%
99 residues ( 38% of your sequence) have been modelled with 98.5% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
156 residues ( 59%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 53% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3isyA_
98.5 17
PDB header:protein binding
Chain: A: PDB Molecule:intracellular proteinase inhibitor;
PDBTitle: crystal structure of an intracellular proteinase inhibitor (ipi,2 bsu11130) from bacillus subtilis at 2.61 a resolution
2d1g4ma2
97.3 19
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Arrestin/Vps26-like
3c2kl6A_
96.8 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the cardb domain of pf1109 from2 pyrococcus furiosus. northeast structural genomics3 consortium target pfr193a
4c2kutA_
96.5 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of gmr58a from geobacter metallireducens.2 northeast structural genomics consortium target gmr58a
5d1w8oa1
96.3 22
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:E-set domains of sugar-utilizing enzymes
6c2p9rA_
96.2 19
PDB header:signaling protein
Chain: A: PDB Molecule:alpha-2-macroglobulin;
PDBTitle: human alpha2-macroglogulin is composed of multiple domains,2 as predicted by homology with complement component c3
7c2l0dA_
95.9 16
PDB header:cell adhesion
Chain: A: PDB Molecule:cell surface protein;
PDBTitle: solution nmr structure of putative cell surface protein ma_4588 (272-2 376 domain) from methanosarcina acetivorans, northeast structural3 genomics consortium target mvr254a
8c5z87B_
95.6 13
PDB header:hydrolase
Chain: B: PDB Molecule:emgh1;
PDBTitle: structural of a novel b-glucosidase emgh1 at 2.3 angstrom from2 erythrobacter marinus
9d1ayra2
95.4 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Arrestin/Vps26-like
10c1jsyA_
95.4 20
PDB header:signaling protein
Chain: A: PDB Molecule:bovine arrestin-2 (full length);
PDBTitle: crystal structure of bovine arrestin-2
11c5z9sB_
95.1 17
PDB header:hydrolase
Chain: B: PDB Molecule:glycosyl hydrolase family 3 protein;
PDBTitle: functional and structural characterization of a beta-glucosidase2 involved in saponin metabolism from intestinal bacteria
12c5x7hA_
95.0 18
PDB header:transferase
Chain: A: PDB Molecule:cycloisomaltooligosaccharide glucanotransferase;
PDBTitle: crystal structure of paenibacillus sp. 598k2 cycloisomaltooligosaccharide glucanotransferase complexed with3 cycloisomaltoheptaose
13d1cf1a2
94.6 28
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Arrestin/Vps26-like
14c5tf0B_
94.5 16
PDB header:hydrolase
Chain: B: PDB Molecule:glycosyl hydrolase family 3 n-terminal domain protein;
PDBTitle: crystal structure of glycosil hydrolase family 3 n-terminal domain2 protein from bacteroides intestinalis
15c3osvC_
94.3 19
PDB header:structural protein
Chain: C: PDB Molecule:flagellar basal-body rod modification protein flgd;
PDBTitle: the crytsal structure of flgd from p. aeruginosa
16c5a7mA_
94.2 14
PDB header:hydrolase
Chain: A: PDB Molecule:beta-xylosidase;
PDBTitle: the structure of hypocrea jecorina beta-xylosidase xyl3a (bxl1)
17c5yotB_
94.2 13
PDB header:hydrolase
Chain: B: PDB Molecule:isoprimeverose-producing enzyme;
PDBTitle: isoprimeverose-producing enzyme from aspergillus oryzae in complex2 with isoprimeverose
18c4zwjA_
93.0 23
PDB header:signaling protein
Chain: A: PDB Molecule:chimera protein of human rhodopsin, mouse s-arrestin, and
PDBTitle: crystal structure of rhodopsin bound to arrestin by femtosecond x-ray2 laser
19c4zwjC_
92.7 23
PDB header:signaling protein
Chain: C: PDB Molecule:chimera protein of human rhodopsin, mouse s-arrestin, and
PDBTitle: crystal structure of rhodopsin bound to arrestin by femtosecond x-ray2 laser
20c1ayrA_
92.7 23
PDB header:sensory transduction
Chain: A: PDB Molecule:arrestin;
PDBTitle: arrestin from bovine rod outer segments
21c3u48A_
not modelled 92.7 16
PDB header:hydrolase
Chain: A: PDB Molecule:jmb19063;
PDBTitle: from soil to structure: a novel dimeric family 3-beta-glucosidase2 isolated from compost using metagenomic analysis
22c3pvmB_
not modelled 92.4 12
PDB header:immune system
Chain: B: PDB Molecule:cobra venom factor;
PDBTitle: structure of complement c5 in complex with cvf
23c6q7jB_
not modelled 92.4 26
PDB header:hydrolase
Chain: B: PDB Molecule:exo-1,4-beta-xylosidase xlnd;
PDBTitle: gh3 exo-beta-xylosidase (xlnd) in complex with xylobiose aziridine2 activity based probe
24c2pn5A_
not modelled 92.3 14
PDB header:immune system
Chain: A: PDB Molecule:thioester-containing protein i;
PDBTitle: crystal structure of tep1r
25c1sujA_
not modelled 91.9 19
PDB header:signaling protein
Chain: A: PDB Molecule:cone arrestin;
PDBTitle: x-ray crystal structure of ambystoma tigrinum cone arrestin
26c5axhA_
not modelled 91.3 13
PDB header:hydrolase
Chain: A: PDB Molecule:dextranase;
PDBTitle: crystal structure of thermophilic dextranase from thermoanaerobacter2 pseudethanolicus, d312g mutant in complex with isomaltohexaose
27c5jp0A_
not modelled 90.8 21
PDB header:hydrolase
Chain: A: PDB Molecule:beta-glucosidase bogh3b;
PDBTitle: bacteroides ovatus xyloglucan pul gh3b with bound glucose
28c5nbsA_
not modelled 90.6 19
PDB header:hydrolase
Chain: A: PDB Molecule:beta-glucosidase;
PDBTitle: structural studies of a glycoside hydrolase family 3 beta-glucosidase2 from the model fungus neurospora crassa
29c5wabD_
not modelled 90.6 18
PDB header:hydrolase
Chain: D: PDB Molecule:putative beta-glucosidase;
PDBTitle: crystal structure of bifidobacterium adolescentis gh3 beta-glucosidase
30c4acqA_
not modelled 90.2 20
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:alpha-2-macroglobulin;
PDBTitle: alpha-2 macroglobulin
31c2r5oA_
not modelled 90.1 19
PDB header:transport protein
Chain: A: PDB Molecule:putative atp binding component of abc-transporter;
PDBTitle: crystal structure of the c-terminal domain of wzt
32c4i3gB_
not modelled 90.0 19
PDB header:hydrolase
Chain: B: PDB Molecule:beta-glucosidase;
PDBTitle: crystal structure of desr, a beta-glucosidase from streptomyces2 venezuelae in complex with d-glucose.
33c3zz1A_
not modelled 89.5 19
PDB header:hydrolase
Chain: A: PDB Molecule:beta-d-glucoside glucohydrolase;
PDBTitle: crystal structure of a glycoside hydrolase family 3 beta-glucosidase,2 bgl1 from hypocrea jecorina at 2.1a resolution.
34c4d0jD_
not modelled 89.1 22
PDB header:hydrolase
Chain: D: PDB Molecule:beta-glucosidase;
PDBTitle: crystal structure of glycoside hydrolase family 3 beta-2 glucosidase cel3a from the moderately thermophilic fungus3 rasamsonia emersonii
35c1g4mA_
not modelled 89.0 21
PDB header:signaling protein
Chain: A: PDB Molecule:beta-arrestin1;
PDBTitle: crystal structure of bovine beta-arrestin 1
36c6i2xB_
not modelled 88.6 13
PDB header:immune system
Chain: B: PDB Molecule:cobra venom factor;
PDBTitle: structure of complement c5 in complex with small molecule inhibitor2 and cvf
37c2x41A_
not modelled 87.9 18
PDB header:hydrolase
Chain: A: PDB Molecule:beta-glucosidase;
PDBTitle: structure of beta-glucosidase 3b from thermotoga neapolitana in2 complex with glucose
38c3cu7A_
not modelled 87.6 10
PDB header:immune system
Chain: A: PDB Molecule:complement c5;
PDBTitle: human complement component 5
39c4zo9B_
not modelled 86.7 15
PDB header:hydrolase
Chain: B: PDB Molecule:lin1840 protein;
PDBTitle: crystal structure of mutant (d270a) beta-glucosidase from listeria2 innocua in complex with laminaribiose
40c3hrzA_
not modelled 86.5 13
PDB header:immune system
Chain: A: PDB Molecule:cobra venom factor;
PDBTitle: cobra venom factor (cvf) in complex with human factor b
41c3c12A_
not modelled 86.3 7
PDB header:biosynthetic protein
Chain: A: PDB Molecule:flagellar protein;
PDBTitle: crystal structure of flgd from xanthomonas campestris:2 insights into the hook capping essential for flagellar3 assembly
42c1l9mB_
not modelled 86.3 12
PDB header:transferase
Chain: B: PDB Molecule:protein-glutamine glutamyltransferase e3;
PDBTitle: three-dimensional structure of the human transglutaminase 32 enzyme: binding of calcium ions change structure for3 activation
43d1g0da2
not modelled 85.8 15
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Transglutaminase, two C-terminal domains
Family:Transglutaminase, two C-terminal domains
44c2qsvA_
not modelled 85.2 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of protein of unknown function from porphyromonas2 gingivalis w83
45d1ex0a2
not modelled 85.2 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Transglutaminase, two C-terminal domains
Family:Transglutaminase, two C-terminal domains
46c4rtdA_
not modelled 83.7 11
PDB header:lipid binding protein
Chain: A: PDB Molecule:uncharacterized lipoprotein yfhm;
PDBTitle: escherichia coli alpha-2-macroglobulin activated by porcine elastase
47c2b39B_
not modelled 83.5 13
PDB header:immune system
Chain: B: PDB Molecule:c3;
PDBTitle: structure of mammalian c3 with an intact thioester at 3a resolution
48c4acqC_
not modelled 83.4 18
PDB header:hydrolase inhibitor
Chain: C: PDB Molecule:alpha-2-macroglobulin;
PDBTitle: alpha-2 macroglobulin
49c4iidB_
not modelled 82.8 20
PDB header:hydrolase
Chain: B: PDB Molecule:beta-glucosidase 1;
PDBTitle: crystal structure of beta-glucosidase 1 from aspergillus aculeatus in2 complex with 1-deoxynojirimycin
50c4zzkA_
not modelled 82.2 10
PDB header:motor protein
Chain: A: PDB Molecule:basal-body rod modification protein flgd;
PDBTitle: crystal structure of truncated flgd (monoclinic form) from the human2 pathogen helicobacter pylori
51c1cf1B_
not modelled 82.1 25
PDB header:structural protein
Chain: B: PDB Molecule:protein (arrestin);
PDBTitle: arrestin from bovine rod outer segments
52c4a5wA_
not modelled 82.0 11
PDB header:immune system
Chain: A: PDB Molecule:complement c5;
PDBTitle: crystal structure of c5b6
53c5wvpA_
not modelled 80.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:beta-glucosidase;
PDBTitle: expression, characterization and crystal structure of a novel beta-2 glucosidase from paenibacillus barengoltzii
54c3ac0B_
not modelled 80.8 20
PDB header:hydrolase
Chain: B: PDB Molecule:beta-glucosidase i;
PDBTitle: crystal structure of beta-glucosidase from kluyveromyces marxianus in2 complex with glucose
55d1qfha2
not modelled 79.8 15
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Filamin repeat (rod domain)
56c5k6lA_
not modelled 79.5 18
PDB header:hydrolase
Chain: A: PDB Molecule:b-glucosidase;
PDBTitle: structure of a gh3 b-glucosidase from cow rumen metagenome
57c4fxgA_
not modelled 77.2 16
PDB header:immune system
Chain: A: PDB Molecule:complement c4 beta chain;
PDBTitle: complement c4 in complex with masp-2
58c1yewI_
not modelled 76.9 21
PDB header:oxidoreductase, membrane protein
Chain: I: PDB Molecule:particulate methane monooxygenase, b subunit;
PDBTitle: crystal structure of particulate methane monooxygenase
59c3rgbA_
not modelled 76.9 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:methane monooxygenase subunit b2;
PDBTitle: crystal structure of particulate methane monooxygenase from2 methylococcus capsulatus (bath)
60d2vzsa2
not modelled 75.2 21
Fold:Immunoglobulin-like beta-sandwich
Superfamily:beta-Galactosidase/glucuronidase domain
Family:beta-Galactosidase/glucuronidase domain
61c3rfrI_
not modelled 73.7 16
PDB header:oxidoreductase
Chain: I: PDB Molecule:pmob;
PDBTitle: crystal structure of particulate methane monooxygenase (pmmo) from2 methylocystis sp. strain m
62c3vmpA_
not modelled 70.0 28
PDB header:hydrolase
Chain: A: PDB Molecule:dextranase;
PDBTitle: crystal structure of dextranase from streptococcus mutans in complex2 with 4,5-epoxypentyl alpha-d-glucopyranoside
63c6ajjA_
not modelled 69.9 17
PDB header:membrane protein, hydrolase
Chain: A: PDB Molecule:drug exporters of the rnd superfamily-like protein,
PDBTitle: crystal structure of mycolic acid transporter mmpl3 from mycobacterium2 smegmatis complexed with ica38
64c4m9pA_
not modelled 69.8 16
PDB header:cell adhesion
Chain: A: PDB Molecule:filamin-a;
PDBTitle: crystal structure of the human filamin a ig-like domains 3-5
65c5wabC_
not modelled 69.3 16
PDB header:hydrolase
Chain: C: PDB Molecule:putative beta-glucosidase;
PDBTitle: crystal structure of bifidobacterium adolescentis gh3 beta-glucosidase
66d1kyaa2
not modelled 65.2 8
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
67c3o0rC_
not modelled 62.2 18
PDB header:immune system/oxidoreductase
Chain: C: PDB Molecule:nitric oxide reductase subunit c;
PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment
68d2q3za2
not modelled 61.0 10
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Transglutaminase, two C-terminal domains
Family:Transglutaminase, two C-terminal domains
69d1vjja2
not modelled 57.4 11
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Transglutaminase, two C-terminal domains
Family:Transglutaminase, two C-terminal domains
70d1hfua2
not modelled 54.6 11
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
71c2xbtA_
not modelled 53.8 15
PDB header:sugar binding protein
Chain: A: PDB Molecule:cellulosomal scaffoldin;
PDBTitle: structure of a scaffoldin carbohydrate-binding module family 3b from2 the cellulosome of bacteroides cellulosolvens: structural diversity3 and implications for carbohydrate binding
72c4u48A_
not modelled 53.1 13
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:putative inner membrane lipoprotein;
PDBTitle: crystal structure of salmonella alpha-2-macroglobulin
73c5vhvB_
not modelled 51.3 9
PDB header:hydrolase/dna
Chain: B: PDB Molecule:alkylpurine dna glycosylase alkc;
PDBTitle: pseudomonas fluorescens alkylpurine dna glycosylase alkc bound to dna2 containing an oxocarbenium-intermediate analog
74d1jv2a2
not modelled 49.7 22
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Integrin domains
Family:Integrin domains
75c4gucA_
not modelled 49.0 23
PDB header:unknown function
Chain: A: PDB Molecule:protein ba_2500;
PDBTitle: 1.4 angstrom resolution crystal structure of uncharacterized protein2 ba_2500 from bacillus anthracis str. ames
76c2qkiA_
not modelled 48.9 11
PDB header:immune system/hydrolase inhibitor
Chain: A: PDB Molecule:complement c3;
PDBTitle: human c3c in complex with the inhibitor compstatin
77c2f1eA_
not modelled 45.9 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein apag;
PDBTitle: solution structure of apag protein
78c3gdcC_
not modelled 45.3 14
PDB header:oxidoreductase
Chain: C: PDB Molecule:multicopper oxidase;
PDBTitle: crystal structure of multicopper oxidase
79c3ppsD_
not modelled 44.3 14
PDB header:oxidoreductase
Chain: D: PDB Molecule:laccase;
PDBTitle: crystal structure of an ascomycete fungal laccase from thielavia2 arenaria
80d2q9oa2
not modelled 42.0 12
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
81d1xvsa_
not modelled 41.5 10
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ApaG-like
Family:ApaG-like
82c1pjeA_
not modelled 41.1 28
PDB header:viral protein
Chain: A: PDB Molecule:vpu protein;
PDBTitle: structure of the channel-forming trans-membrane domain of2 virus protein "u"(vpu) from hiv-1
83c2gohA_
not modelled 41.1 28
PDB header:viral protein
Chain: A: PDB Molecule:vpu protein;
PDBTitle: three-dimensional structure of the trans-membrane domain of2 vpu from hiv-1 in aligned phospholipid bicelles
84c2gofA_
not modelled 41.1 28
PDB header:viral protein
Chain: A: PDB Molecule:vpu protein;
PDBTitle: three-dimensional structure of the trans-membrane domain of2 vpu from hiv-1 in aligned phospholipid bicelles
85c1pi7A_
not modelled 41.1 28
PDB header:viral protein
Chain: A: PDB Molecule:vpu protein;
PDBTitle: structure of the channel-forming trans-membrane domain of2 virus protein "u" (vpu) from hiv-1
86c1pi8A_
not modelled 41.1 28
PDB header:viral protein
Chain: A: PDB Molecule:vpu protein;
PDBTitle: structure of the channel-forming trans-membrane domain of2 virus protein "u" (vpu) from hiv-1
87d1tzaa_
not modelled 40.1 15
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ApaG-like
Family:ApaG-like
88d1b2pa_
not modelled 40.0 20
Fold:beta-Prism II
Superfamily:alpha-D-mannose-specific plant lectins
Family:alpha-D-mannose-specific plant lectins
89c6f0kA_
not modelled 39.1 8
PDB header:membrane protein
Chain: A: PDB Molecule:cytochrome c family protein;
PDBTitle: alternative complex iii
90c4umgA_
not modelled 38.9 18
PDB header:structural protein
Chain: A: PDB Molecule:protein lin-41;
PDBTitle: crystal structure of the lin-41 filamin domain
91d1v10a2
not modelled 38.7 12
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
92c1kv3F_
not modelled 38.6 9
PDB header:transferase
Chain: F: PDB Molecule:protein-glutamine gamma-glutamyltransferase;
PDBTitle: human tissue transglutaminase in gdp bound form
93c6mitC_
not modelled 38.3 17
PDB header:lipid transport
Chain: C: PDB Molecule:lipopolysaccharide export system protein lptc;
PDBTitle: lptbfgc from enterobacter cloacae
94c5khnB_
not modelled 37.1 8
PDB header:membrane protein
Chain: B: PDB Molecule:rnd transporter;
PDBTitle: crystal structures of the burkholderia multivorans hopanoid2 transporter hpnn
95c4xydB_
not modelled 36.6 8
PDB header:oxidoreductase
Chain: B: PDB Molecule:norc-like protein;
PDBTitle: nitric oxide reductase from roseobacter denitrificans (rdnor)
96c2e6jA_
not modelled 35.8 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hydin protein;
PDBTitle: solution structure of the c-terminal papd-like domain from2 human hydin protein
97c2l8sA_
not modelled 35.4 9
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-1;
PDBTitle: solution nmr structure of transmembrane and cytosolic regions of2 integrin alpha1 in detergent micelles
98d1k3ia1
not modelled 35.1 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:E-set domains of sugar-utilizing enzymes
99d1nqja_
not modelled 33.8 21
Fold:CUB-like
Superfamily:Collagen-binding domain
Family:Collagen-binding domain
100d1fftb2
not modelled 33.1 17
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
101c2kogA_
not modelled 33.1 27
PDB header:membrane protein
Chain: A: PDB Molecule:vesicle-associated membrane protein 2;
PDBTitle: lipid-bound synaptobrevin solution nmr structure
102d1xq4a_
not modelled 32.3 13
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ApaG-like
Family:ApaG-like
103c5hnoC_
not modelled 32.2 15
PDB header:transport protein
Chain: C: PDB Molecule:abc type transport system putative atp binding protein;
PDBTitle: the structure of the kdo-capped saccharide binding subunit of the o-122 specific abc transporter, wzt
104d1wlha1
not modelled 31.5 18
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Filamin repeat (rod domain)
105c1qfhB_
not modelled 29.5 21
PDB header:actin binding protein
Chain: B: PDB Molecule:protein (gelation factor);
PDBTitle: dimerization of gelation factor from dictyostelium2 discoideum: crystal structure of rod domains 5 and 6
106c3g7mA_
not modelled 29.5 9
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:xylanase inhibitor tl-xi;
PDBTitle: structure of the thaumatin-like xylanase inhibitor tlxi
107c2jwaA_
not modelled 28.5 33
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: erbb2 transmembrane segment dimer spatial structure
108c2ks1A_
not modelled 28.5 33
PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation
109c3sqrA_
not modelled 28.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:laccase;
PDBTitle: crystal structure of laccase from botrytis aclada at 1.67 a resolution
110c3wmmY_
not modelled 27.6 22
PDB header:photosynthesis
Chain: Y: PDB Molecule:lh1 alpha polypeptide;
PDBTitle: crystal structure of the lh1-rc complex from thermochromatium tepidum2 in c2 form
111c5daoA_
not modelled 26.2 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:laccase;
PDBTitle: laccase from antrodiella faginea
112c3hd7A_
not modelled 26.1 26
PDB header:exocytosis
Chain: A: PDB Molecule:vesicle-associated membrane protein 2;
PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1
113c6d5bL_
not modelled 26.1 15
PDB header:sugar binding protein
Chain: L: PDB Molecule:glycoside hydrolase wp_045175321;
PDBTitle: structure of caldicellulosiruptor danielii cbm3 module of glycoside2 hydrolase wp_045175321
114c5sv5A_
not modelled 26.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:microbial collagenase;
PDBTitle: 1.0 angstrom crystal structure of pre-peptidase c-terminal domain of2 collagenase from bacillus anthracis.
115c3rghA_
not modelled 25.3 22
PDB header:cell adhesion
Chain: A: PDB Molecule:filamin-a;
PDBTitle: structure of filamin a immunoglobulin-like repeat 10 from homo sapiens
116c2n28A_
not modelled 24.8 12
PDB header:viral protein
Chain: A: PDB Molecule:protein vpu;
PDBTitle: solid-state nmr structure of vpu
117c6hrbD_
not modelled 24.1 13
PDB header:membrane protein
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: cryo-em structure of the kdpfabc complex in an e2 inward-facing state2 (state 2)
118c5mrwH_
not modelled 24.1 13
PDB header:hydrolase
Chain: H: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
119c5mrwD_
not modelled 24.1 13
PDB header:hydrolase
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: structure of the kdpfabc complex
120c6hraD_
not modelled 24.1 13
PDB header:membrane protein
Chain: D: PDB Molecule:potassium-transporting atpase kdpf subunit;
PDBTitle: cryo-em structure of the kdpfabc complex in an e1 outward-facing state2 (state 1)

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below