Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3590c_(PE_PGRS58)_4031583_4033337
DateFri Aug 9 18:20:27 BST 2019
Unique Job IDc70b38dd0ca853ab
SequenceMSFVIVAPEA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.046 Y:35.740 Z:53.071
Model (left) based on template c5xfsA_
Top template information
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 13%
78 residues ( 13% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
584 residues (100%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 86% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsA_
100.0 49
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38a1
100.0 36
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
3c2g38A_
100.0 36
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c1ygvA_
99.8 27
PDB header:structural protein/contractile protein
Chain: A: PDB Molecule:collagen i alpha 1;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment
5c1y0fB_
99.8 26
PDB header:structural protein/contractile protein
Chain: B: PDB Molecule:collagen i alpha 2;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule
6c3hqvB_
99.7 32
PDB header:structural protein, contractile protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain;
PDBTitle: low resolution, molecular envelope structure of type i2 collagen in situ determined by fiber diffraction. single3 type i collagen molecule, rigid body refinement
7c3bogB_
97.2 51
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
8c3bogA_
97.2 51
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
9c2pneA_
97.2 48
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: crystal structure of the snow flea antifreeze protein
10c3boiB_
97.2 48
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
11c3boiA_
97.2 48
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
12c5ctdB_
93.9 35
PDB header:structural protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain,collagen alpha-2(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
13c5ctdA_
93.8 33
PDB header:structural protein
Chain: A: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-1(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
14c5ctiC_
93.7 33
PDB header:structural protein
Chain: C: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-3(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen (native form)
15c1nayC_
93.5 25
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: gpp-foldon:x-ray structure
16d1wa8a1
91.8 9
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
17c3gvmA_
91.7 15
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
18c4iogD_
89.7 12
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
19c4wj2A_
88.9 15
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
20c4lwsA_
88.1 20
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
21c3zbhC_
not modelled 83.8 15
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
22c2vs0B_
not modelled 80.6 9
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
23c2klwA_
not modelled 77.4 37
PDB header:de novo protein
Chain: A: PDB Molecule:(pkg)10;
PDBTitle: solution structure of an abc collagen heterotrimer reveals a2 single-register helix stabilized by electrostatic3 interactions
24c6nb3B_
not modelled 74.3 24
PDB header:virus
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: mers-cov complex with human neutralizing lca60 antibody fab fragment2 (state 1)
25c2kg7A_
not modelled 72.2 47
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
26c2kg7B_
not modelled 69.2 17
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
27d1wa8b1
not modelled 64.4 15
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
28c6g7oA_
not modelled 61.9 20
PDB header:membrane protein
Chain: A: PDB Molecule:alkaline ceramidase 3,soluble cytochrome b562;
PDBTitle: crystal structure of human alkaline ceramidase 3 (acer3) at 2.72 angstrom resolution
29c5x5bB_
not modelled 58.8 22
PDB header:viral protein
Chain: B: PDB Molecule:spike glycoprotein;
PDBTitle: prefusion structure of sars-cov spike glycoprotein, conformation 2
30d1n7ka_
not modelled 58.5 18
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
31c3u8pB_
not modelled 57.5 19
PDB header:fluorescent protein, electron transport
Chain: B: PDB Molecule:cytochrome b562 integral fusion with enhanced green
PDBTitle: cytochrome b562 integral fusion with egfp
32c2cuoF_
not modelled 52.7 37
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
33c2cuoC_
not modelled 52.7 37
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
34c2w0cR_
not modelled 52.3 25
PDB header:virus
Chain: R: PDB Molecule:protein p3;
PDBTitle: x-ray structure of the entire lipid-containing bacteriophage pm2
35c2z2sD_
not modelled 49.1 22
PDB header:transcription
Chain: D: PDB Molecule:anti-sigma factor chrr, transcriptional activator chrr;
PDBTitle: crystal structure of rhodobacter sphaeroides sige in complex with the2 anti-sigma chrr
36c3onjA_
not modelled 48.2 17
PDB header:protein transport
Chain: A: PDB Molecule:t-snare vti1;
PDBTitle: crystal structure of yeast vti1p_habc domain
37c1k6fA_
not modelled 46.1 31
PDB header:structural protein
Chain: A: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
38c1k6fE_
not modelled 46.1 31
PDB header:structural protein
Chain: E: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
39c1k6fD_
not modelled 46.1 31
PDB header:structural protein
Chain: D: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
40c1k6fF_
not modelled 46.1 31
PDB header:structural protein
Chain: F: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
41c1k6fB_
not modelled 46.1 31
PDB header:structural protein
Chain: B: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
42c1k6fC_
not modelled 46.1 31
PDB header:structural protein
Chain: C: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
43c6cs2A_
not modelled 45.9 22
PDB header:viral protein/hydrolase
Chain: A: PDB Molecule:spike glycoprotein,fibritin;
PDBTitle: sars spike glycoprotein - human ace2 complex, stabilized variant, all2 ace2-bound particles
44c5x5fC_
not modelled 45.5 24
PDB header:viral protein
Chain: C: PDB Molecule:s protein;
PDBTitle: prefusion structure of mers-cov spike glycoprotein, conformation 2
45c2ebaI_
not modelled 44.9 8
PDB header:oxidoreductase
Chain: I: PDB Molecule:putative glutaryl-coa dehydrogenase;
PDBTitle: crystal structure of the putative glutaryl-coa dehydrogenase from2 thermus thermophilus
46c3ah9D_
not modelled 41.8 39
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
47c3ah9F_
not modelled 38.8 36
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
48c5szsC_
not modelled 37.6 24
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: glycan shield and epitope masking of a coronavirus spike protein2 observed by cryo-electron microscopy
49d1lghb_
not modelled 36.8 29
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
50c3ah9A_
not modelled 36.8 38
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
51c4rglA_
not modelled 36.4 22
PDB header:dna binding protein
Chain: A: PDB Molecule:filamentation induced by camp protein fic;
PDBTitle: crystal structure of a fic family protein (dde_2494) from2 desulfovibrio desulfuricans g20 at 2.70 a resolution
52c2cuoE_
not modelled 35.4 35
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
53c2cuoD_
not modelled 35.4 35
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
54c2cuoA_
not modelled 35.4 35
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
55c2cuoB_
not modelled 35.4 35
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
56c5mgzA_
not modelled 34.9 26
PDB header:transferase
Chain: A: PDB Molecule:8-demethylnovobiocic acid c(8)-methyltransferase;
PDBTitle: streptomyces spheroides novo (8-demethylnovbiocic acid2 methyltransferase) with sah
57c4z9cB_
not modelled 34.8 25
PDB header:transferase
Chain: B: PDB Molecule:subtilase cytotoxin subunit b-like protein;
PDBTitle: ecpltab oxidized
58c3h6pB_
not modelled 34.8 40
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:esat-6 like protein esxs;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
59c3ah9C_
not modelled 34.1 36
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
60c3ah9B_
not modelled 34.1 36
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
61c3ah9E_
not modelled 34.1 36
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
62c5i08A_
not modelled 34.0 25
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein, envelope glycoprotein chimera;
PDBTitle: prefusion structure of a human coronavirus spike protein
63c4kjsB_
not modelled 33.9 21
PDB header:transport protein
Chain: B: PDB Molecule:cation exchanger yfke;
PDBTitle: structure of native yfke
64d1bpoa1
not modelled 33.6 27
Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:Clathrin heavy-chain linker domain
65d1umya_
not modelled 32.8 16
Fold:TIM beta/alpha-barrel
Superfamily:Homocysteine S-methyltransferase
Family:Homocysteine S-methyltransferase
66d1lt7a_
not modelled 32.8 15
Fold:TIM beta/alpha-barrel
Superfamily:Homocysteine S-methyltransferase
Family:Homocysteine S-methyltransferase
67c3w5mA_
not modelled 32.2 20
PDB header:hydrolase
Chain: A: PDB Molecule:putative rhamnosidase;
PDBTitle: crystal structure of streptomyces avermitilis alpha-l-rhamnosidase
68c3o7kA_
not modelled 31.3 22
PDB header:lyase
Chain: A: PDB Molecule:ohcu decarboxylase;
PDBTitle: crystal structure of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline2 decarboxylase from klebsiella pneumoniae
69c5fsgA_
not modelled 30.9 16
PDB header:viral protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein, hantavirus
PDBTitle: structure of the hantavirus nucleoprotein provides insights2 into the mechanism of rna encapsidation and a template for3 drug design
70c5g4yA_
not modelled 30.9 27
PDB header:signaling protein
Chain: A: PDB Molecule:chemotaxis protein;
PDBTitle: structural basis for carboxylic acid recognition by a cache2 chemosensory domain.
71c3a0mF_
not modelled 30.7 36
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
72d2pv7a1
not modelled 29.4 14
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:TyrA dimerization domain-like
73c4jkvA_
not modelled 29.2 20
PDB header:membrane protein
Chain: A: PDB Molecule:soluble cytochrome b562, smoothened homolog;
PDBTitle: structure of the human smoothened 7tm receptor in complex with an2 antitumor agent
74c5n7kD_
not modelled 29.0 34
PDB header:cell adhesion
Chain: D: PDB Molecule:marvel domain-containing protein 2;
PDBTitle: crystal structure of the coiled-coil domain of human tricellulin
75c2vsgB_
not modelled 26.5 12
PDB header:membrane protein
Chain: B: PDB Molecule:variant surface glycoprotein iltat 1.24;
PDBTitle: a structural motif in the variant surface glycoproteins of trypanosoma2 brucei
76c1wrgA_
not modelled 25.7 29
PDB header:membrane protein
Chain: A: PDB Molecule:light-harvesting protein b-880, beta chain;
PDBTitle: light-harvesting complex 1 beta subunit from wild-type2 rhodospirillum rubrum
77c2v8sV_
not modelled 25.6 22
PDB header:protein transport
Chain: V: PDB Molecule:vesicle transport through interaction with
PDBTitle: vti1b habc domain - epsinr enth domain complex
78d256ba_
not modelled 24.9 19
Fold:Four-helical up-and-down bundle
Superfamily:Cytochromes
Family:Cytochrome b562
79c5v8wG_
not modelled 24.9 33
PDB header:hydrolase
Chain: G: PDB Molecule:integrator complex subunit 9;
PDBTitle: crystal structure of human integrator ints9-ints11 ctd complex
80c5xlrC_
not modelled 24.8 21
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: structure of sars-cov spike glycoprotein
81c2z8jA_
not modelled 24.1 22
PDB header:transferase
Chain: A: PDB Molecule:gamma-glutamyltranspeptidase;
PDBTitle: crystal structure of escherichia coli gamma-glutamyltranspeptidase in2 complex with azaserine prepared in the dark
82c3ks8D_
not modelled 23.1 24
PDB header:viral protein/rna
Chain: D: PDB Molecule:polymerase cofactor vp35;
PDBTitle: crystal structure of reston ebolavirus vp35 rna binding domain in2 complex with 18bp dsrna
83c3kthD_
not modelled 21.9 17
PDB header:hydrolase
Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit;
PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form
84d2nlza1
not modelled 21.5 22
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Gamma-glutamyltranspeptidase-like
85c4krrA_
not modelled 21.4 12
PDB header:signaling protein
Chain: A: PDB Molecule:wnt inhibitor of dorsal protein;
PDBTitle: crystal structure of drosophila wntd n-terminal domain-linker2 (residues 31-240)
86c1bpoA_
not modelled 21.0 26
PDB header:membrane protein
Chain: A: PDB Molecule:protein (clathrin);
PDBTitle: clathrin heavy-chain terminal domain and linker
87c6b7nC_
not modelled 20.9 18
PDB header:viral protein
Chain: C: PDB Molecule:spike protein;
PDBTitle: cryo-electron microscopy structure of porcine delta coronavirus spike2 protein in the pre-fusion state
88c2e0wA_
not modelled 20.6 22
PDB header:transferase
Chain: A: PDB Molecule:gamma-glutamyltranspeptidase;
PDBTitle: t391a precursor mutant protein of gamma-glutamyltranspeptidase from2 escherichia coli
89c2a1tC_
not modelled 20.2 14
PDB header:oxidoreductase/electron transport
Chain: C: PDB Molecule:acyl-coa dehydrogenase, medium-chain specific,
PDBTitle: structure of the human mcad:etf e165betaa complex
90c6mvtA_
not modelled 20.1 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde dehydrogenase;
PDBTitle: structure of a bacterial aldh16 complexed with nadh
91c6et5u_
not modelled 20.0 36
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
92c4gdxA_
not modelled 20.0 28
PDB header:hydrolase
Chain: A: PDB Molecule:gamma-glutamyltranspeptidase 1 heavy chain;
PDBTitle: crystal structure of human gamma-glutamyl transpeptidase--glutamate2 complex
93c6nzkB_
not modelled 19.9 19
PDB header:viral protein
Chain: B: PDB Molecule:spike surface glycoprotein;
PDBTitle: structural basis for human coronavirus attachment to sialic acid2 receptors
94c3jclC_
not modelled 19.8 22
PDB header:viral protein
Chain: C: PDB Molecule:spike glycoprotein;
PDBTitle: cryo-electron microscopy structure of a coronavirus spike glycoprotein2 trimer
95c2ml3A_
not modelled 19.8 18
PDB header:isomerase
Chain: A: PDB Molecule:poly(beta-d-mannuronate) c5 epimerase 6;
PDBTitle: solution structure of alge6r3 subunit from the azotobacter vinelandii2 mannuronan c5-epimerase
96c4x2eA_
not modelled 19.3 19
PDB header:transferase
Chain: A: PDB Molecule:fic family protein putative filamentation induced by camp
PDBTitle: clostridium difficile wild type fic protein
97c5jw9B_
not modelled 18.9 31
PDB header:protein binding
Chain: B: PDB Molecule:rna polymerase ii elongation factor ell2;
PDBTitle: the crystal structure of ell2 oclludin domain and aff4 peptide
98c3g9kD_
not modelled 18.3 22
PDB header:hydrolase
Chain: D: PDB Molecule:capsule biosynthesis protein capd;
PDBTitle: crystal structure of bacillus anthracis transpeptidase enzyme capd
99c2jifA_
not modelled 18.3 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:short/branched chain specific acyl-coa dehydrogenase;
PDBTitle: structure of human short-branched chain acyl-coa dehydrogenase2 (acadsb)

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