Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3592_(TB11.2)_4034236_4034553
DateFri Aug 9 18:20:27 BST 2019
Unique Job IDd81eabf0ec04ed19
SequenceMPVVKINAIE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:31.416 Y:40.511 Z:39.499
Model (left) based on template c3hx9B_
Top template information
PDB header:oxidoreductase
Chain: B: PDB Molecule:protein rv3592;
PDBTitle: structure of heme-degrader, mhud (rv3592), from2 mycobacterium tuberculosis with two hemes bound in its3 active site
Confidence and coverage
Confidence:100.0% Coverage: 93%
98 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3hx9B_



100.0 100
PDB header:oxidoreductase
Chain: B: PDB Molecule:protein rv3592;
PDBTitle: structure of heme-degrader, mhud (rv3592), from2 mycobacterium tuberculosis with two hemes bound in its3 active site
2c3e8oB_



99.9 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (dr_2100) from deinococcus radiodurans at 1.40 a resolution
3d1iuja_



99.9 36
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
4c3gz7B_



99.9 18
PDB header:biosynthetic protein
Chain: B: PDB Molecule:putative antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 (np_888398.1) from bordetella bronchiseptica at 2.15 a resolution
5c2omoC_



99.9 12
PDB header:oxidoreductase
Chain: C: PDB Molecule:duf176;
PDBTitle: putative antibiotic biosynthesis monooxygenase from nitrosomonas2 europaea
6c2bbeA_



99.9 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein so0527;
PDBTitle: crystal structure of protein so0527 from shewanella oneidensis
7c4dpoA_



99.9 5
PDB header:unknown function
Chain: A: PDB Molecule:conserved protein;
PDBTitle: crystal structure of a conserved protein mm_1583 from methanosarcina2 mazei go1
8c4zosA_



99.9 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein ye0340 from yersinia enterocolitica subsp.
PDBTitle: 2.20 angstrom resolution crystal structure of protein ye0340 of2 unidentified function from yersinia enterocolitica subsp.3 enterocolitica 8081]
9d2omoa1



99.9 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
10c2gffB_



99.9 15
PDB header:sugar binding protein
Chain: B: PDB Molecule:lsrg protein;
PDBTitle: crystal structure of yersinia pestis lsrg
11c3bm7A_



99.9 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein of unknown function with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (cc_2132) from caulobacter crescentus cb15 at 1.35 a resolution
12c2fb0A_



99.9 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of conserved protein of unknown function from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution, possible3 oxidoreductase
13d1y0ha_



99.9 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
14d1x7va_



99.9 14
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
15c3mcsB_



99.9 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative monooxygenase;
PDBTitle: crystal structure of putative monooxygenase (fn1347) from2 fusobacterium nucleatum subsp. nucleatum atcc 25586 at 2.55 a3 resolution
16c3kngA_



99.9 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:snoab;
PDBTitle: crystal structure of snoab, a cofactor-independent oxygenase2 from streptomyces nogalater, determined to 1.9 resolution
17d1xbwa_



99.9 20
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
18c4hl9B_



99.9 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of antibiotic biosynthesis monooxygenase
19d2zdpa1



99.9 17
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
20d2pd1a1



99.9 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
21c3fgvB_



not modelled 99.9 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein with ferredoxin-like fold;
PDBTitle: crystal structure of a putative antibiotic biosynthesis monooxygenase2 (spo2313) from silicibacter pomeroyi dss-3 at 1.30 a resolution
22c4dn9B_



not modelled 99.8 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 from chloroflexus aurantiacus j-10-fl
23d1tuva_



not modelled 99.8 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PA3566-like
24d1tz0a_



not modelled 99.8 20
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
25c3kkfA_



not modelled 99.8 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of putative antibiotic biosynthesis monooxygenase2 (np_810307.1) from bacteriodes thetaiotaomicron vpi-5482 at 1.30 a3 resolution
26c3f44A_



not modelled 99.8 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative monooxygenase;
PDBTitle: crystal structure of putative monooxygenase (yp_193413.1) from2 lactobacillus acidophilus ncfm at 1.55 a resolution
27c5f9pA_



not modelled 99.8 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:anthrone oxidase-like protein;
PDBTitle: crystal structure study of anthrone oxidase-like protein
28c2rilA_



not modelled 99.8 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of a putative monooxygenase (yp_001095275.1) from2 shewanella loihica pv-4 at 1.26 a resolution
29d1q8ba_



not modelled 99.7 14
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Hypothetical protein YjcS
30c3fj2A_



not modelled 99.7 16
PDB header:unknown function
Chain: A: PDB Molecule:monooxygenase-like protein;
PDBTitle: crystal structure of a monooxygenase-like protein (lin2316) from2 listeria innocua at 1.85 a resolution
31c3tvzA_



not modelled 99.7 32
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative uncharacterized protein yhgc;
PDBTitle: structure of bacillus subtilis hmob
32c4ae5C_



not modelled 99.7 22
PDB header:signaling protein
Chain: C: PDB Molecule:signal transduction protein trap;
PDBTitle: structure of a major regulator of staphylococcal pathogenesis
33d1lq9a_



not modelled 99.6 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Actinorhodin biosynthesis monooxygenase ActVa-Orf6
34c6fxdB_



not modelled 99.5 12
PDB header:biosynthetic protein
Chain: B: PDB Molecule:mupz;
PDBTitle: crystal structure of mupz from pseudomonas fluorescens
35c3bn7A_



not modelled 98.3 7
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (cc_2267) from2 caulobacter crescentus cb15 at 1.64 a resolution
36d1q4ra_



not modelled 98.2 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
37c3bdeA_



not modelled 98.1 11
PDB header:unknown function
Chain: A: PDB Molecule:mll5499 protein;
PDBTitle: crystal structure of a dabb family protein with a ferredoxin-like fold2 (mll5499) from mesorhizobium loti maff303099 at 1.79 a resolution
38c3bb5B_



not modelled 98.1 17
PDB header:unknown function
Chain: B: PDB Molecule:stress responsive alpha-beta protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (jann_3925) from jannaschia sp. ccs1 at 2.30 a resolution
39c2qycA_



not modelled 98.0 15
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein (bb1511) from2 bordetella bronchiseptica rb50 at 1.90 a resolution
40c3bguA_



not modelled 97.9 12
PDB header:unknown function
Chain: A: PDB Molecule:ferredoxin-like protein of unknown function;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (tfu_0763) from thermobifida fusca yx at 1.50 a resolution
41d1tr0a_



not modelled 97.9 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
42d2cb2a1



not modelled 97.9 22
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:SOR-like
43c5y02D_



not modelled 97.8 12
PDB header:lyase
Chain: D: PDB Molecule:hydroxynitrile lyase;
PDBTitle: c-terminal peptide depleted mutant of hydroxynitrile lyase from2 passiflora edulis (pehnl) bound with (r)-mandelonitrile
44d1rjja_



not modelled 97.7 11
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
45c3fmbA_



not modelled 97.6 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:dimeric protein of unknown function and ferredoxin-like
PDBTitle: crystal structure of dimeric protein of unknown function and2 ferredoxin-like fold (yp_212648.1) from bacteroides fragilis nctc3 9343 at 1.85 a resolution
46c3hfkB_



not modelled 97.4 12
PDB header:isomerase
Chain: B: PDB Molecule:4-methylmuconolactone methylisomerase;
PDBTitle: crystal structure of 4-methylmuconolactone methylisomerase (h52a) in2 complex with 4-methylmuconolactone
47c3dcaC_



not modelled 97.3 18
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:rpa0582;
PDBTitle: crystal structure of the rpa0582- protein of unknown2 function from rhodopseudomonas palustris- a structural3 genomics target
48c5b0aA_



not modelled 97.2 13
PDB header:lyase
Chain: A: PDB Molecule:olivetolic acid cyclase;
PDBTitle: polyketide cyclase oac from cannabis sativa, h5q mutant
49d2go8a1



not modelled 96.9 26
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:PG130-like
50d2ftra1



not modelled 96.9 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:EthD-like
51c5ixuA_



not modelled 96.9 13
PDB header:structural genomics/unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized nipsnap domain protein from2 burkholderia xenovorans
52d2hiqa1



not modelled 96.6 12
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Hypothetical protein YdhR
53d1vqsa_



not modelled 96.1 11
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:NIPSNAP
54d1vqya1



not modelled 96.0 11
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:NIPSNAP
55d1x8da1



not modelled 95.6 13
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:YiiL-like
56c5k9fA_



not modelled 95.3 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:nipsnap domain protein;
PDBTitle: crystal structure of a nipsnap domain protein from burkholderia2 xenovorans
57c5kakE_



not modelled 95.1 10
PDB header:unknown function
Chain: E: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized nipsnap-like domain protein2 from burkholderia xenovorans
58d2fiua1



not modelled 95.0 14
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Atu0297-like
59c3lo3E_



not modelled 94.8 13
PDB header:structure genomics, unknown function
Chain: E: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved functionally unknown protein from2 colwellia psychrerythraea 34h.
60c2qlwA_



not modelled 94.1 16
PDB header:isomerase
Chain: A: PDB Molecule:rhau;
PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum
61c2qlxA_



not modelled 94.1 16
PDB header:isomerase
Chain: A: PDB Molecule:l-rhamnose mutarotase;
PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum in complex with l-rhamnose
62c3bf4B_



not modelled 94.0 17
PDB header:unknown function
Chain: B: PDB Molecule:ethyl tert-butyl ether degradation ethd protein;
PDBTitle: crystal structure of an ethd-like protein (reut_b5694) from ralstonia2 eutropha jmp134 at 2.10 a resolution
63c1wd6B_



not modelled 93.3 13
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein ydhr;
PDBTitle: crystal structure of jw1657 from escherichia coli
64c3a16C_



not modelled 92.6 16
PDB header:lyase
Chain: C: PDB Molecule:aldoxime dehydratase;
PDBTitle: crystal structure of aldoxime dehydratase (oxdre) in complex2 with propionaldoxime
65c2jdjB_



not modelled 85.5 16
PDB header:biosynthetic protein
Chain: B: PDB Molecule:redy-like protein;
PDBTitle: crystal structure of hapk from hahella chejuensis
66c6hhnA_



not modelled 75.1 9
PDB header:isomerase
Chain: A: PDB Molecule:l-rhamnose mutarotase;
PDBTitle: crystal structure of l-rhamnose mutarotase fa22100 from formosa2 agariphila
67c3gn6B_



not modelled 69.7 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ct0912, orfan protein with a ferredoxin-like domain repeat;
PDBTitle: crystal structure of ct0912, orfan protein from chlorobium tepidum2 with a ferredoxin-like domain repeat (np_661805.1) from chlorobium3 tepidum tls at 1.80 a resolution
68d2cfxa2



not modelled 51.5 21
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
69c5cw9A_



not modelled 23.4 18
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed ferredoxin-ferredoxin domain insertion
PDBTitle: crystal structure of de novo designed ferredoxin-ferredoxin domain2 insertion protein
70d1i1ga2



not modelled 22.4 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
71c2e1aD_



not modelled 21.7 16
PDB header:transcription
Chain: D: PDB Molecule:75aa long hypothetical regulatory protein asnc;
PDBTitle: crystal structure of ffrp-dm1
72c2kl8A_



not modelled 20.7 15
PDB header:de novo protein
Chain: A: PDB Molecule:or15;
PDBTitle: solution nmr structure of de novo designed ferredoxin-like fold2 protein, northeast structural genomics consortium target or15
73d2cs4a1



not modelled 20.3 24
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
74c2djwF_



not modelled 17.1 13
PDB header:unknown function
Chain: F: PDB Molecule:probable transcriptional regulator, asnc family;
PDBTitle: crystal structure of ttha0845 from thermus thermophilus hb8
75d2cyya2



not modelled 14.4 16
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
76c1zr9A_



not modelled 10.4 0
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 593;
PDBTitle: solution structure of a human c2h2-type zinc finger protein
77d1zr9a1



not modelled 10.4 0
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
78c2x4kB_



not modelled 9.6 22
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate tautomerase;
PDBTitle: crystal structure of sar1376, a putative 4-oxalocrotonate2 tautomerase from the methicillin-resistant staphylococcus3 aureus (mrsa)
79c3lygA_



not modelled 9.5 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ntf2-like protein of unknown function;
PDBTitle: crystal structure of ntf2-like protein of unknown function2 (yp_270605.1) from colwellia psychrerythraea 34h at 1.61 a resolution
80c4p6iB_



not modelled 8.9 16
PDB header:hydrolase
Chain: B: PDB Molecule:crispr-associated endoribonuclease cas2;
PDBTitle: crystal structure of the cas1-cas2 complex from escherichia coli
81d2okqa1



not modelled 7.2 25
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:YbaA-like
82c4lbhA_



not modelled 6.7 14
PDB header:lyase
Chain: A: PDB Molecule:5-chloro-2-hydroxyhydroquinone dehydrochlorinase (tftg);
PDBTitle: 5-chloro-2-hydroxyhydroquinone dehydrochlorinase (tftg) from2 burkholderia phenoliruptrix ac1100: apo-form
83d1r2aa_



not modelled 6.6 25
Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
84c3qzcA_



not modelled 6.5 8
PDB header:signaling protein
Chain: A: PDB Molecule:periplasmic protein cpxp;
PDBTitle: structure of the periplasmic stress response protein cpxp
85c4h0aB_



not modelled 5.7 13
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a cysteine-rich secretory protein (sav1118) from2 staphylococcus aureus subsp. aureus mu50 at 1.90 a resolution
86c3zpnD_



not modelled 5.3 4
PDB header:photosynthesis
Chain: D: PDB Molecule:photosystem ii reaction center psb28 protein;
PDBTitle: structure of psb28
87c4ky3A_



not modelled 5.2 13
PDB header:de novo protein
Chain: A: PDB Molecule:designed protein or327;
PDBTitle: three-dimensional structure of the orthorhombic crystal of2 computationally designed insertion domain , northeast structural3 genomics consortium (nesg) target or327

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