Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3593_(lpqF)_4034531_4035889
DateFri Aug 9 18:20:27 BST 2019
Unique Job ID0b2711a1eaeaef41
SequenceVGPARLHNRR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:63.577 Y:66.494 Z:57.823
Model (left) based on template c2xftA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:orf12;
PDBTitle: structural and mechanistic studies on a cephalosporin esterase from2 the clavulanic acid biosynthesis pathway
Confidence and coverage
Confidence:100.0% Coverage: 90%
409 residues ( 90% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2xftA_
100.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:orf12;
PDBTitle: structural and mechanistic studies on a cephalosporin esterase from2 the clavulanic acid biosynthesis pathway
2c3fwlA_
100.0 12
PDB header:transferase, hydrolase
Chain: A: PDB Molecule:penicillin-binding protein 1b;
PDBTitle: crystal structure of the full-length transglycosylase pbp1b from2 escherichia coli
3c3udiA_
100.0 12
PDB header:penicillin-binding protein/antibiotic
Chain: A: PDB Molecule:penicillin-binding protein 1a;
PDBTitle: crystal structure of acinetobacter baumannii pbp1a in complex with2 penicillin g
4c3zg8B_
100.0 12
PDB header:penicillin-binding protein
Chain: B: PDB Molecule:penicillin-binding protein 4;
PDBTitle: crystal structure of penicillin binding protein 4 from2 listeria monocytogenes in the ampicillin bound form
5c5u2gA_
100.0 13
PDB header:lipid-binding protein
Chain: A: PDB Molecule:penicillin-binding protein 1a;
PDBTitle: 2.6 angstrom resolution crystal structure of penicillin-binding2 protein 1a from haemophilus influenzae
6c3dwkC_
100.0 12
PDB header:transferase
Chain: C: PDB Molecule:penicillin-binding protein 2;
PDBTitle: identification of dynamic structural motifs involved in2 peptidoglycan glycosyltransfer
7c2olvA_
100.0 11
PDB header:transferase
Chain: A: PDB Molecule:penicillin-binding protein 2;
PDBTitle: structural insight into the transglycosylation step of bacterial cell2 wall biosynthesis : donor ligand complex
8c4oonA_
100.0 12
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:penicillin-binding protein 1a;
PDBTitle: crystal structure of pbp1a in complex with compound 17 ((4z,8s,11e,2 14s)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-3 dihydro-2h-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-4 triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid)
9c2jciA_
100.0 9
PDB header:drug-binding protein
Chain: A: PDB Molecule:penicillin-binding protein 1b;
PDBTitle: structural insights into the catalytic mechanism and the2 role of streptococcus pneumoniae pbp1b
10d2c5wb1
100.0 11
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
11c2bg1A_
100.0 7
PDB header:peptidoglycan
Chain: A: PDB Molecule:penicillin-binding protein 1b;
PDBTitle: active site restructuring regulates ligand recognition in2 classa penicillin-binding proteins (pbps)
12d2bg1a1
100.0 7
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
13c6g9fA_
100.0 16
PDB header:hydrolase/antibiotic
Chain: A: PDB Molecule:peptidoglycan d,d-transpeptidase mrda;
PDBTitle: structural basis for the inhibition of e. coli pbp2
14c4jbfB_
100.0 13
PDB header:transferase
Chain: B: PDB Molecule:peptidoglycan glycosyltransferase;
PDBTitle: crystal structure of peptidoglycan glycosyltransferase from atopobium2 parvulum dsm 20469.
15c5crfA_
100.0 12
PDB header:penicillin-binding protein
Chain: A: PDB Molecule:penicillin-binding protein 1a;
PDBTitle: structure of the penicillin-binding protein pona1 from mycobacterium2 tuberculosis
16c5dvyA_
100.0 12
PDB header:penicillin-binding protein
Chain: A: PDB Molecule:penicillin binding protein 2 prime;
PDBTitle: 2.95 angstrom crystal structure of the dimeric form of penicillin2 binding protein 2 prime from enterococcus faecium
17c2wadB_
100.0 12
PDB header:peptide binding protein
Chain: B: PDB Molecule:penicillin-binding protein 2b;
PDBTitle: penicillin-binding protein 2b (pbp-2b) from streptococcus2 pneumoniae (strain 5204)
18c5u47A_
100.0 10
PDB header:lipid-binding protein
Chain: A: PDB Molecule:penicillin binding protein 2x;
PDBTitle: 1.95 angstrom resolution crystal structure of penicillin binding2 protein 2x from streptococcus thermophilus
19c3pbnA_
100.0 13
PDB header:hydrolase/antibiotic
Chain: A: PDB Molecule:penicillin-binding protein 3;
PDBTitle: crystal structure of apo pbp3 from pseudomonas aeruginosa
20c3equB_
100.0 13
PDB header:biosynthetic protein
Chain: B: PDB Molecule:penicillin-binding protein 2;
PDBTitle: crystal structure of penicillin-binding protein 2 from neisseria2 gonorrhoeae
21c3vslB_
not modelled 100.0 12
PDB header:penicillin-binding protein
Chain: B: PDB Molecule:penicillin-binding protein 3;
PDBTitle: crystal structure of penicillin-binding protein 3 (pbp3) from2 methicilin-resistant staphylococcus aureus in the cefotaxime bound3 form.
22c5lp4A_
not modelled 100.0 9
PDB header:hydrolase/antibiotic
Chain: A: PDB Molecule:penicillin-binding protein 2 (pbp2);
PDBTitle: penicillin-binding protein (pbp2) from helicobacter pylori
23c3pbqA_
not modelled 100.0 12
PDB header:hydrolase/antibiotic
Chain: A: PDB Molecule:penicillin-binding protein 3;
PDBTitle: crystal structure of pbp3 complexed with imipenem
24c1qmfA_
not modelled 100.0 10
PDB header:cell cycle
Chain: A: PDB Molecule:penicillin-binding protein 2x;
PDBTitle: penicillin-binding protein 2x (pbp-2x) acyl-enzyme complex
25c3lo7A_
not modelled 100.0 17
PDB header:transferase
Chain: A: PDB Molecule:penicillin-binding protein a;
PDBTitle: crystal structure of pbpa from mycobacterium tuberculosis
26c3oc2A_
not modelled 100.0 13
PDB header:penicillin-binding protein
Chain: A: PDB Molecule:penicillin-binding protein 3;
PDBTitle: crystal structure of penicillin-binding protein 3 from pseudomonas2 aeruginosa
27c1mwuA_
not modelled 100.0 13
PDB header:biosynthetic protein
Chain: A: PDB Molecule:penicillin-binding protein 2a;
PDBTitle: structure of methicillin acyl-penicillin binding protein 2a from2 methicillin resistant staphylococcus aureus strain 27r at 2.60 a3 resolution.
28d2olua2
not modelled 100.0 9
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
29c4ye5A_
not modelled 100.0 10
PDB header:penicillin binding protein
Chain: A: PDB Molecule:peptidoglycan synthetase penicillin-binding protein 3;
PDBTitle: the crystal structure of a peptidoglycan synthetase from2 bifidobacterium adolescentis atcc 15703
30c5troA_
not modelled 100.0 11
PDB header:hydrolase
Chain: A: PDB Molecule:penicillin-binding protein 1;
PDBTitle: 1.8 angstrom resolution crystal structure of dimerization and2 transpeptidase domains (residues 39-608) of penicillin-binding3 protein 1 from staphylococcus aureus.
31c4mnrA_
not modelled 100.0 13
PDB header:transferase
Chain: A: PDB Molecule:peptidoglycan glycosyltransferase;
PDBTitle: crystal structure of d,d-transpeptidase domain of peptidoglycan2 glycosyltransferase from eggerthella lenta
32c3ue3A_
not modelled 100.0 11
PDB header:transferase
Chain: A: PDB Molecule:septum formation, penicillin binding protein 3,
PDBTitle: crystal structure of acinetobacter baumanni pbp3
33c1pmdA_
not modelled 100.0 10
PDB header:peptidoglycan synthesis
Chain: A: PDB Molecule:peptidoglycan synthesis multifunctional enzyme;
PDBTitle: penicillin-binding protein 2x (pbp-2x)
34c3lo7B_
not modelled 100.0 18
PDB header:transferase
Chain: B: PDB Molecule:penicillin-binding protein a;
PDBTitle: crystal structure of pbpa from mycobacterium tuberculosis
35c4ovdA_
not modelled 100.0 11
PDB header:transferase
Chain: A: PDB Molecule:peptidoglycan glycosyltransferase;
PDBTitle: crystal structure of a putative peptidoglycan glycosyltransferase from2 atopobium parvulum dsm 20469
36c4bjpA_
not modelled 100.0 10
PDB header:transferase
Chain: A: PDB Molecule:penicillin binding protein transpeptidase domain protein;
PDBTitle: crystal structure of e. coli penicillin binding protein 3
37c5uy7A_
not modelled 100.0 11
PDB header:transferase
Chain: A: PDB Molecule:peptidoglycan glycosyltransferase;
PDBTitle: crystal structure of a peptidoglycan glycosyltransferase from2 burkholderia ambifaria
38d1vqqa3
not modelled 100.0 13
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
39d1rp5a4
not modelled 100.0 10
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
40c2wuqB_
not modelled 100.0 19
PDB header:transcription
Chain: B: PDB Molecule:beta-lactamase regulatory protein blab;
PDBTitle: crystal structure of blab protein from streptomyces cacaoi
41c5hx9A_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of beta-lactamase from burkholderia vietnamiensis
42c5e2eB_
not modelled 100.0 15
PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of beta-lactamase precursor blaa from yersinia2 enterocolitica
43c2v20A_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase tem;
PDBTitle: structure of a tem-1 beta-lactamase insertant allosterically regulated2 by kanamycin and anions. complex with sulfate.
44d1pyya4
not modelled 100.0 11
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
45d1n9ba_
not modelled 100.0 17
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
46c2wuqA_
not modelled 100.0 20
PDB header:transcription
Chain: A: PDB Molecule:beta-lactamase regulatory protein blab;
PDBTitle: crystal structure of blab protein from streptomyces cacaoi
47d1g6aa_
not modelled 100.0 18
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
48d1m40a_
not modelled 100.0 16
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
49c2ov5A_
not modelled 100.0 15
PDB header:hydrolase
Chain: A: PDB Molecule:carbapenemase;
PDBTitle: crystal structure of the kpc-2 carbapenemase
50c6bsrA_
not modelled 100.0 12
PDB header:hydrolase
Chain: A: PDB Molecule:pbp4 protein;
PDBTitle: crystal structure of penicillin-binding protein 4 (pbp4) from2 enterococcus faecalis in the benzylpenicillin bound form.
51d1hzoa_
not modelled 100.0 14
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
52c2j7vA_
not modelled 100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:tll2115 protein;
PDBTitle: structure of pbp-a
53c3dw0B_
not modelled 100.0 16
PDB header:hydrolase
Chain: B: PDB Molecule:class a carbapenemase kpc-2;
PDBTitle: crystal structure of the class a carbapenemase kpc-2 at 1.62 angstrom resolution
54c4hesA_
not modelled 100.0 14
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase class a-like protein;
PDBTitle: structure of a beta-lactamase class a-like protein from veillonella2 parvula.
55c4yfmA_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: class a beta-lactamase from mycobacterium abscessus
56c3qhyA_
not modelled 100.0 17
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: structural, thermodynamic and kinetic analysis of the picomolar2 binding affinity interaction of the beta-lactamase inhibitor protein-3 ii (blip-ii) with class a beta-lactamases
57c5hw3A_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of a beta lactamase from burkholderia vietnamiensis
58c6niqB_
not modelled 100.0 18
PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of the putative class a beta-lactamase penp from2 rhodopseudomonas palustris
59c4mxbB_
not modelled 100.0 16
PDB header:hydrolase/antibiotic
Chain: B: PDB Molecule:bel-1;
PDBTitle: crystal structure of extended-spectrum beta-lactamase bel-1 in complex2 with imipenem
60d1buea_
not modelled 100.0 16
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
61d1o7ea_
not modelled 100.0 20
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
62c4ewfA_
not modelled 100.0 23
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: the crystal structure of beta-lactamase from sphaerobacter2 thermophilus dsm 20745
63d1iysa_
not modelled 100.0 16
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
64c5vpqA_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of beta-lactamase from burkholderia phymatum
65c4b88A_
not modelled 100.0 23
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: ancestral (gnca) beta-lactamase class a
66c4eqiA_
not modelled 100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:carbapenem-hydrolizing beta-lactamase sfc-1;
PDBTitle: crystal structure of serratia fonticola carbapenemase sfc-1
67d1dy6a_
not modelled 100.0 18
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
68d2cc1a1
not modelled 100.0 16
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
69c3w4pA_
not modelled 100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of peni beta-lactamase from burkholderia2 pseudomallei at ph7.5
70c6bn3A_
not modelled 100.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: ctx-m-151 class a extended-spectrum beta-lactamase apo crystal2 structure at 1.3 angstrom resolution.
71c3w4qC_
not modelled 100.0 19
PDB header:hydrolase
Chain: C: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of pena beta-lactamase from burkholderia multivorans2 at ph4.2
72d1bsga_
not modelled 100.0 16
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
73c6mk6C_
not modelled 100.0 16
PDB header:hydrolase
Chain: C: PDB Molecule:beta-lactamase;
PDBTitle: carbapenemase vcc-1 from vibrio cholerae n14-02106
74c5e43A_
not modelled 100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of beta-lactamase sros_5706 from streptosporangium2 roseum
75c6nj1A_
not modelled 100.0 13
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of class a beta-lactamase from clostridium kluyveri2 dsm 555
76c4ztkA_
not modelled 100.0 14
PDB header:transferase, cell cycle
Chain: A: PDB Molecule:cell division protein ftsi/penicillin binding protein 2;
PDBTitle: transpeptidase domain of ftsi4 d,d-transpeptidase from legionella2 pneumophila.
77c2qpnA_
not modelled 100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase ges-1;
PDBTitle: ges-1 beta-lactamase
78c4dxbB_
not modelled 100.0 17
PDB header:sugar binding protein, hydrolase
Chain: B: PDB Molecule:maltose-binding periplasmic protein, beta-lactamase tem
PDBTitle: 2.29a structure of the engineered mbp tem-1 fusion protein rg13 in2 complex with zinc, p1 space group
79d1i2sa_
not modelled 100.0 15
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
80c1i2sA_
not modelled 100.0 15
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: beta-lactamase from bacillus licheniformis bs3
81c3lezA_
not modelled 100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of a halotolerant bacterial beta-lactamase
82d1djaa_
not modelled 100.0 15
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
83c3cg5A_
not modelled 100.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of the covalent adduct formed between tb2 b-lactamase and clavulanate
84c5tfqA_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of a representative of class a beta-lactamase from2 bacteroides cellulosilyticus dsm 14838
85c1w7fB_
not modelled 100.0 15
PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of the class a beta-lactamase bs32 inhibited with isocitrate
86c3p09A_
not modelled 100.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of beta-lactamase from francisella tularensis
87c3p09B_
not modelled 100.0 16
PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of beta-lactamase from francisella tularensis
88c3cjmA_
not modelled 100.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:putative beta-lactamase;
PDBTitle: crystal structure of putative beta-lactamase (np_815223.1) from2 enterococcus faecalis v583 at 1.50 a resolution
89d1xp4a2
not modelled 100.0 13
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
90d1tvfa2
not modelled 100.0 13
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
91d1alqa_
not modelled 100.0 16
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
92d1k25a4
not modelled 100.0 10
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
93d1e25a_
not modelled 100.0 16
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
94c5gs8A_
not modelled 100.0 13
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of tla-3 extended-spectrum beta-lactamase
95c5tr7A_
not modelled 100.0 18
PDB header:penicillin-binding protein
Chain: A: PDB Molecule:d-alanyl-d-alanine carboxypeptidase;
PDBTitle: crystal structure of a putative d-alanyl-d-alanine carboxypeptidase2 from vibrio cholerae o1 biovar eltor str. n16961
96d3beca2
not modelled 100.0 17
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
97c2iwdA_
not modelled 100.0 11
PDB header:antibiotic resistance
Chain: A: PDB Molecule:methicillin resistance mecr1 protein;
PDBTitle: oxacilloyl-acylated mecr1 extracellular antibiotic-sensor domain.
98c5zqeC_
not modelled 100.0 18
PDB header:antibiotic
Chain: C: PDB Molecule:lmo2812 protein;
PDBTitle: crystal structure of penicillin-binding protein d2 from listeria2 monocytogenes in the cefuroxime bound form
99c1xp4C_
not modelled 100.0 12
PDB header:hydrolase
Chain: C: PDB Molecule:d-alanyl-d-alanine carboxypeptidase;
PDBTitle: crystal structure of a peptidoglycan synthesis regulatory2 factor (pbp3) from streptococcus pneumoniae
100c5aq7B_
not modelled 100.0 17
PDB header:chaperone
Chain: B: PDB Molecule:d12_db04v3;
PDBTitle: darpin-based crystallization chaperones exploit molecular geometry as2 a screening dimension in protein crystallography
101c3humB_
not modelled 100.0 13
PDB header:hydrolase/antibiotics
Chain: B: PDB Molecule:penicillin-binding protein 4;
PDBTitle: crystal structure of penicillin binding protein 4 from staphylococcus2 aureus col in complex with cefotaxime
102c1tvfA_
not modelled 100.0 14
PDB header:penicillin binding
Chain: A: PDB Molecule:penicillin binding protein 4;
PDBTitle: crystal structure of penicillin-binding protein 4 (pbp4)2 from staphylococcus aureus
103c6ni0A_
not modelled 100.0 12
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of the beta lactamase class d ybxi from burkholderia2 thailandensis
104d1xa1a_
not modelled 100.0 8
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
105d1nrfa_
not modelled 100.0 12
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase
106c6nhsA_
not modelled 100.0 11
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of the beta lactamase class d ybxi from nostoc
107c5e2fB_
not modelled 100.0 13
PDB header:hydrolase
Chain: B: PDB Molecule:beta-lactamase ybxi;
PDBTitle: crystal structure of beta-lactamase class d from bacillus subtilis
108c4zdxA_
not modelled 99.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: structure of oxa-51 beta-lactamase
109c4k91A_
not modelled 99.9 18
PDB header:hydrolase
Chain: A: PDB Molecule:d-ala-d-ala-carboxypeptidase;
PDBTitle: crystal structure of penicillin-binding protein 5 (pbp5) from2 pseudomonas aeruginosa in apo state
110c6n1nA_
not modelled 99.9 10
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase;
PDBTitle: crystal structure of class d beta-lactamase from sebaldella termitidis2 atcc 33386
111c2bcfA_
not modelled 99.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:probable d-alanyl-d-alanine carboxypeptidase dacb2;
PDBTitle: crystal structure of a evolved putative penicillin-binding protein2 homolog, rv2911, from mycobacterium tuberculosis.
112c6osuA_
not modelled 99.9 21
PDB header:hydrolase
Chain: A: PDB Molecule:d-alanyl-d-alanine carboxypeptidase (penicillin binding
PDBTitle: crystal structure of the d-alanyl-d-alanine carboxypeptidase dacd from2 francisella tularensis
113c1z6fA_
not modelled 99.9 15
PDB header:hydrolase
Chain: A: PDB Molecule:penicillin-binding protein 5;
PDBTitle: crystal structure of penicillin-binding protein 5 from e. coli in2 complex with a boronic acid inhibitor
114c4oh0A_
not modelled 99.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase oxa-58;
PDBTitle: crystal structure of oxa-58 carbapenemase
115c5fsrB_
not modelled 99.9 20
PDB header:hydrolase
Chain: B: PDB Molecule:d-alanyl-d-alanine carboxypeptidase dacd;
PDBTitle: crystal structure of penicillin binding protein 6b from2 escherichia coli
116c3it9B_
not modelled 99.9 19
PDB header:hydrolase
Chain: B: PDB Molecule:d-alanyl-d-alanine carboxypeptidase dacc;
PDBTitle: crystal structure of penicillin-binding protein 6 (pbp6) from e. coli2 in apo state
117c2jc7A_
not modelled 99.9 13
PDB header:hydrolase
Chain: A: PDB Molecule:beta-lactamase oxa-24;
PDBTitle: the crystal structure of the carbapenemase oxa-24 reveals2 new insights into the mechanism of carbapenem-hydrolysis
118c3if6C_
not modelled 99.9 18
PDB header:hydrolase
Chain: C: PDB Molecule:oxa-46 oxacillinase;
PDBTitle: crystal structure of oxa-46 beta-lactamase from p. aeruginosa
119c3a3jA_
not modelled 99.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:pbp5;
PDBTitle: crystal structures of penicillin binding protein 5 from haemophilus2 influenzae
120d1es5a_
not modelled 99.9 17
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:beta-Lactamase/D-ala carboxypeptidase

Binding site prediction 

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