Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD3621c_(PPE65)_4060827_4062068
DateFri Aug 9 18:20:30 BST 2019
Unique Job IDca385a540feb6829
SequenceMLDFAQLPPE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:59.669 Y:71.238 Z:73.299
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 42%
173 residues ( 42% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 57% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_
100.0 64
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38b1
100.0 35
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c2g38B_
100.0 35
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c4xy3A_
100.0 18
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
98.5 17
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
97.7 13
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c4iogD_
97.6 15
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
8c3gvmA_
97.6 15
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c3zbhC_
97.5 15
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
96.8 16
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsB_
95.8 17
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12c4lwsA_
95.4 15
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
13d1wa8b1
95.3 17
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
14c4i0xA_
94.2 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
15c2kg7B_
90.4 16
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4i0xJ_
69.6 18
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17d1ui5a2
22.9 24
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
18c5frgA_
17.3 75
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
19c1bkvA_
14.7 50
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
20c1bkvB_
14.1 50
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
21c1bkvC_
not modelled 14.1 50
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
22c3h6pB_
not modelled 11.3 47
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:esat-6 like protein esxs;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
23d1zeea1
not modelled 11.3 33
Fold:Indolic compounds 2,3-dioxygenase-like
Superfamily:Indolic compounds 2,3-dioxygenase-like
Family:Indoleamine 2,3-dioxygenase-like
24c2kg7A_
not modelled 10.7 47
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
25c2ke4A_
not modelled 10.1 75
PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
26c2nvjA_
not modelled 9.2 40
PDB header:hydrolase
Chain: A: PDB Molecule:25mer peptide from vacuolar atp synthase subunit
PDBTitle: nmr structures of transmembrane segment from subunit a from2 the yeast proton v-atpase
27c1vytF_
not modelled 8.8 13
PDB header:transport protein
Chain: F: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
28c4lzxB_
not modelled 8.5 24
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-free cam
29c2iu1A_
not modelled 8.3 28
PDB header:transcription
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of eif5 c-terminal domain
30c2fulE_
not modelled 7.9 28
PDB header:translation
Chain: E: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of the c-terminal domain of s. cerevisiae eif5
31c6aokA_
not modelled 7.5 38
PDB header:hydrolase
Chain: A: PDB Molecule:ceg4;
PDBTitle: crystal structure of legionella pneumophila effector ceg4 with n-2 terminal tev protease cleavage sequence
32c2lkqA_
not modelled 7.5 44
PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin lambda-like polypeptide 1;
PDBTitle: nmr structure of the lambda 5 22-45 peptide
33c4m1lB_
not modelled 7.3 29
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-bound cam
34c6cgjA_
not modelled 7.3 38
PDB header:hydrolase
Chain: A: PDB Molecule:effector protein lem4 (lpg1101);
PDBTitle: structure of the had domain of effector protein lem4 (lpg1101) from2 legionella pneumophila
35d1khba2
not modelled 7.3 30
Fold:PEP carboxykinase N-terminal domain
Superfamily:PEP carboxykinase N-terminal domain
Family:PEP carboxykinase N-terminal domain
36d1fcda3
not modelled 6.9 38
Fold:CO dehydrogenase flavoprotein C-domain-like
Superfamily:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Family:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
37c5i4rA_
not modelled 6.5 43
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:contact-dependent inhibitor a;
PDBTitle: contact-dependent inhibition system from escherichia coli nc101 -2 ternary cdia/cdii/ef-tu complex (trypsin-modified)
38c2i94B_
not modelled 6.5 50
PDB header:protein binding
Chain: B: PDB Molecule:rhodopsin kinase;
PDBTitle: nmr structure of recoverin bound to rhodopsin kinase
39d1vlfn1
not modelled 6.5 80
Fold:Prealbumin-like
Superfamily:Cna protein B-type domain
Family:Cna protein B-type domain
40c5l85B_
not modelled 6.4 27
PDB header:signaling protein
Chain: B: PDB Molecule:nuclear fragile x mental retardation-interacting protein 1;
PDBTitle: solution structure of the complex between human znhit3 and nufip12 proteins
41c6q5lA_
not modelled 6.1 27
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24h;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24h
42c6q5lB_
not modelled 6.1 27
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24h;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24h
43c1vytE_
not modelled 6.1 13
PDB header:transport protein
Chain: E: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
44c1bzgA_
not modelled 6.1 0
PDB header:hormone
Chain: A: PDB Molecule:parathyroid hormone-related protein;
PDBTitle: the solution structure of human parathyroid hormone-related2 protein (1-34) in near-physiological solution, nmr, 303 structures
45c6q5hA_
not modelled 6.1 27
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24d;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24d
46c6q5mB_
not modelled 6.0 27
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24dab;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24dab
47c6q5iB_
not modelled 6.0 27
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24e;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24e
48c6q5kA_
not modelled 6.0 27
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24k;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24k
49c6nbiP_
not modelled 6.0 80
PDB header:signaling protein
Chain: P: PDB Molecule:long-acting parathyroid hormone analog;
PDBTitle: cryo-em structure of parathyroid hormone receptor type 1 in complex2 with a long-acting parathyroid hormone analog and g protein
50c2jtwA_
not modelled 6.0 50
PDB header:membrane protein
Chain: A: PDB Molecule:transmembrane helix 7 of yeast vatpase;
PDBTitle: solution structure of tm7 bound to dpc micelles
51c6q5mA_
not modelled 6.0 27
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24dab;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24dab
52c1nauA_
not modelled 5.9 42
PDB header:hormone/growth factor
Chain: A: PDB Molecule:glucagon;
PDBTitle: nmr solution structure of the glucagon antagonist [deshis1,2 desphe6, glu9]glucagon amide in the presence of3 perdeuterated dodecylphosphocholine micelles
53c3r47I_
not modelled 5.8 27
PDB header:de novo protein
Chain: I: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
54c3r47J_
not modelled 5.8 27
PDB header:de novo protein
Chain: J: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
55c3r47B_
not modelled 5.8 27
PDB header:de novo protein
Chain: B: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
56c6q5jE_
not modelled 5.8 27
PDB header:de novo protein
Chain: E: PDB Molecule:cc-hex*-l24e;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24e
57c4dexB_
not modelled 5.7 13
PDB header:transport protein
Chain: B: PDB Molecule:voltage-dependent n-type calcium channel subunit alpha-1b;
PDBTitle: crystal structure of the voltage dependent calcium channel beta-22 subunit in complex with the cav2.2 i-ii linker.
58c6q5kB_
not modelled 5.7 27
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24k;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24k
59c6q5jF_
not modelled 5.7 27
PDB header:de novo protein
Chain: F: PDB Molecule:cc-hex*-l24e;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24e
60c3r47C_
not modelled 5.6 27
PDB header:de novo protein
Chain: C: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
61c3r47L_
not modelled 5.6 27
PDB header:de novo protein
Chain: L: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
62c3r47M_
not modelled 5.6 27
PDB header:de novo protein
Chain: M: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
63c3r47F_
not modelled 5.6 27
PDB header:de novo protein
Chain: F: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
64c1t0jC_
not modelled 5.6 14
PDB header:signaling protein
Chain: C: PDB Molecule:voltage-dependent l-type calcium channel alpha-1c subunit;
PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
65c6q5hB_
not modelled 5.5 27
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24d;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24d
66c6q5nD_
not modelled 5.4 27
PDB header:de novo protein
Chain: D: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
67c6q5nG_
not modelled 5.4 27
PDB header:de novo protein
Chain: G: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
68c6q5nC_
not modelled 5.4 27
PDB header:de novo protein
Chain: C: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
69c6q5nE_
not modelled 5.4 27
PDB header:de novo protein
Chain: E: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
70c4kvtC_
not modelled 5.4 27
PDB header:de novo protein
Chain: C: PDB Molecule:6-helix coiled coil cc-hex-l24c peptide;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-l24c
71c4kvtB_
not modelled 5.4 27
PDB header:de novo protein
Chain: B: PDB Molecule:6-helix coiled coil cc-hex-l24c peptide;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-l24c
72c4kvtE_
not modelled 5.4 27
PDB header:de novo protein
Chain: E: PDB Molecule:6-helix coiled coil cc-hex-l24c peptide;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-l24c
73c4kvtF_
not modelled 5.4 27
PDB header:de novo protein
Chain: F: PDB Molecule:6-helix coiled coil cc-hex-l24c peptide;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-l24c
74c4kvtA_
not modelled 5.4 27
PDB header:de novo protein
Chain: A: PDB Molecule:6-helix coiled coil cc-hex-l24c peptide;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-l24c
75c6q5nK_
not modelled 5.4 27
PDB header:de novo protein
Chain: K: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
76c6q5nB_
not modelled 5.4 27
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
77c6q5nJ_
not modelled 5.4 27
PDB header:de novo protein
Chain: J: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
78c6q5nI_
not modelled 5.4 27
PDB header:de novo protein
Chain: I: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
79c6q5nH_
not modelled 5.4 27
PDB header:de novo protein
Chain: H: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
80c6q5nL_
not modelled 5.4 27
PDB header:de novo protein
Chain: L: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
81c6q5nA_
not modelled 5.4 27
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
82c6q5nF_
not modelled 5.4 27
PDB header:de novo protein
Chain: F: PDB Molecule:cc-hex*-l24nle;
PDBTitle: crystal structure of a cc-hex mutant that forms a parallel six-helix2 coiled coil cc-hex*-l24nle
83c3r47A_
not modelled 5.4 27
PDB header:de novo protein
Chain: A: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
84c3r47G_
not modelled 5.4 27
PDB header:de novo protein
Chain: G: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
85c3r47E_
not modelled 5.4 27
PDB header:de novo protein
Chain: E: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
86c3r47K_
not modelled 5.4 27
PDB header:de novo protein
Chain: K: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
87c3r47H_
not modelled 5.4 27
PDB header:de novo protein
Chain: H: PDB Molecule:coiled coil helix l24h;
PDBTitle: crystal structure of a 6-helix coiled coil cc-hex-h24
88c3r48F_
not modelled 5.4 27
PDB header:de novo protein
Chain: F: PDB Molecule:coiled coil helix w22-l24h;
PDBTitle: crystal structure of a hetero-hexamer coiled coil
89c5lzkB_
not modelled 5.4 4
PDB header:structural genomics
Chain: B: PDB Molecule:protein fam83b;
PDBTitle: structure of the domain of unknown function duf1669 from human fam83b
90c4i6jB_
not modelled 5.4 22
PDB header:transcription
Chain: B: PDB Molecule:f-box/lrr-repeat protein 3;
PDBTitle: a ubiquitin ligase-substrate complex
91c3r46F_
not modelled 5.4 27
PDB header:de novo protein
Chain: F: PDB Molecule:coiled coil helix l24d;
PDBTitle: crystal structure of a parallel 6-helix coiled coil cc-hex-d24
92c3r46C_
not modelled 5.4 27
PDB header:de novo protein
Chain: C: PDB Molecule:coiled coil helix l24d;
PDBTitle: crystal structure of a parallel 6-helix coiled coil cc-hex-d24
93c3r46A_
not modelled 5.4 27
PDB header:de novo protein
Chain: A: PDB Molecule:coiled coil helix l24d;
PDBTitle: crystal structure of a parallel 6-helix coiled coil cc-hex-d24
94c3r46B_
not modelled 5.4 27
PDB header:de novo protein
Chain: B: PDB Molecule:coiled coil helix l24d;
PDBTitle: crystal structure of a parallel 6-helix coiled coil cc-hex-d24
95c3r46E_
not modelled 5.4 27
PDB header:de novo protein
Chain: E: PDB Molecule:coiled coil helix l24d;
PDBTitle: crystal structure of a parallel 6-helix coiled coil cc-hex-d24
96c3r46G_
not modelled 5.4 27
PDB header:de novo protein
Chain: G: PDB Molecule:coiled coil helix l24d;
PDBTitle: crystal structure of a parallel 6-helix coiled coil cc-hex-d24
97c3sjrB_
not modelled 5.3 6
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved unkown function protein cv_1783 from2 chromobacterium violaceum atcc 12472
98c3owtC_
not modelled 5.3 71
PDB header:protein binding
Chain: C: PDB Molecule:regulatory protein sir3;
PDBTitle: crystal structure of s. cerevisiae rap1-sir3 complex
99c3juiA_
not modelled 5.3 15
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor eif-2b subunit epsilon;
PDBTitle: crystal structure of the c-terminal domain of human translation2 initiation factor eif2b epsilon subunit

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Transmembrane helix prediction 

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